Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.25298 Avicennia marina HOM05D003764 ORTHO05D004356 6.3e-249 863.6 422 100.0
MSTRG.1112 Avicennia marina HOM05D003764 ORTHO05D004356 3.1e-187 658.7 420 77.1
SalBow7G4127 Salvia bowleyana HOM05D003764 ORTHO05D004356 7.8e-183 644.0 448 70.3
Migut.C00953 Erythranthe guttata HOM05D003764 ORTHO05D004356 1.7e-177 626.3 429 71.1
SGA_v2.0_scaffold275G46585 Striga asiatica HOM05D003764 ORTHO05D004356 1.4e-176 623.2 414 72.9
SGA_v2.0_scaffold108G30854 Striga asiatica HOM05D003764 ORTHO05D004356 1.0e-174 617.1 421 71.5
SGA_v2.0_scaffold108G30849 Striga asiatica HOM05D003764 ORTHO05D004356 1.6e-172 609.8 429 70.4
Migut.C00949 Erythranthe guttata HOM05D003764 ORTHO05D004356 7.6e-170 600.9 374 75.9
Oeu021826.1 Olea europaea HOM05D003764 ORTHO05D004356 9.2e-168 594.0 429 68.8
Oeu035836.1 Olea europaea HOM05D003764 ORTHO05D004356 2.5e-165 585.9 430 66.3
Dinv31931 Davidia involucrata HOM05D003764 ORTHO05D004356 9.6e-157 557.4 441 61.7
Cc10_g00740 Coffea canephora HOM05D003764 ORTHO05D004356 6.2e-156 554.7 415 66.3
SGA_v2.0_scaffold275G46588 Striga asiatica HOM05D003764 ORTHO05D004356 6.2e-156 554.7 333 76.6
vmacro21825 Vaccinium macrocarpon HOM05D003764 ORTHO05D004356 3.1e-155 552.4 438 61.6
GSVIVG01008681001 Vitis vinifera HOM05D003764 ORTHO05D004356 4.5e-154 548.5 434 61.1
Sopen12g031450 Solanum pennellii HOM05D003764 ORTHO05D004356 6.4e-153 544.7 434 62.0
Solyc12g094550.2 Solanum lycopersicum HOM05D003764 ORTHO05D004356 1.9e-152 543.1 435 61.8
RcHm_v2.0_Chr6g0304171 Rosa chinensis HOM05D003764 ORTHO05D004356 9.3e-152 540.8 427 60.9
Nitab4.5_0003544g0010 Nicotiana tabacum HOM05D003764 ORTHO05D004356 1.6e-151 540.0 418 63.4
Actinidia17035 Actinidia chinensis HOM05D003764 ORTHO05D004356 2.1e-151 539.7 426 62.2
Eucgr.F01754 Eucalyptus grandis HOM05D003764 ORTHO05D004356 4.6e-151 538.5 431 60.6
PGSC0003DMG400029320 Solanum tuberosum HOM05D003764 ORTHO05D004356 4.6e-151 538.5 429 61.8
Peaxi162Scf00104g00322 Petunia axillaris HOM05D003764 ORTHO05D004356 7.9e-151 537.7 414 63.5
PGSC0003DMG400009974 Solanum tuberosum HOM05D003764 ORTHO05D004356 5.1e-150 535.0 426 62.2
FAN27G3424 Fragaria x ananassa HOM05D003764 ORTHO05D004356 1.1e-149 533.9 415 61.7
Nitab4.5_0000588g0130 Nicotiana tabacum HOM05D003764 ORTHO05D004356 2.5e-149 532.7 449 59.9
Actinidia15487 Actinidia chinensis HOM05D003764 ORTHO05D004356 5.6e-149 531.6 419 62.1
FvH4_2g37560 Fragaria vesca HOM05D003764 ORTHO05D004356 5.6e-149 531.6 415 61.7
Solyc04g082280.3 Solanum lycopersicum HOM05D003764 ORTHO05D004356 5.6e-149 531.6 347 70.9
FAN15G2102 Fragaria x ananassa HOM05D003764 ORTHO05D004356 1.3e-148 530.4 415 61.0
Peaxi162Scf00064g01131 Petunia axillaris HOM05D003764 ORTHO05D004356 1.6e-148 530.0 400 64.8
Sopen04g035900 Solanum pennellii HOM05D003764 ORTHO05D004356 1.6e-148 530.0 347 70.6
Nn5g30922 Nelumbo nucifera HOM05D003764 ORTHO05D004356 2.8e-148 529.3 430 60.5
Nn6g31748 Nelumbo nucifera HOM05D003764 ORTHO05D004356 1.1e-147 527.3 421 61.0
Nitab4.5_0000699g0100 Nicotiana tabacum HOM05D003764 ORTHO05D004356 1.8e-147 526.6 344 70.6
Manes.05G135000 Manihot esculenta HOM05D003764 ORTHO05D004356 2.4e-147 526.2 422 61.1
Haze_22757 Corylus avellana HOM05D003764 ORTHO05D004356 9.0e-147 524.2 440 59.1
Duzib116G0421 Durio zibethinus HOM05D003764 ORTHO05D004356 1.5e-146 523.5 428 58.6
Lj1g0016047 Lotus japonicus HOM05D003764 ORTHO05D004356 1.5e-146 523.5 410 62.0
MD08G1003100 Malus domestica HOM05D003764 ORTHO05D004356 5.8e-146 521.5 448 59.4
Manes.18G006000 Manihot esculenta HOM05D003764 ORTHO05D004356 7.6e-146 521.2 421 62.0
Ciclev10001182m.g Citrus clementina HOM05D003764 ORTHO05D004356 9.9e-146 520.8 437 60.2
QL02p013934 Quercus lobata HOM05D003764 ORTHO05D004356 1.7e-145 520.0 428 59.8
Rhsim06G0008200 Rhododendron simsii HOM05D003764 ORTHO05D004356 1.7e-145 520.0 409 62.6
arahy.Tifrunner.gnm1.ann1.CSAI9D Arachis hypogaea HOM05D003764 ORTHO05D004356 2.9e-145 519.2 427 60.7
arahy.Tifrunner.gnm1.ann1.I18LAP Arachis hypogaea HOM05D003764 ORTHO05D004356 4.9e-145 518.5 427 60.4
PGR031G0670 Punica granatum HOM05D003764 ORTHO05D004356 4.9e-145 518.5 425 58.8
TWI56G0154 Tripterygium wilfordii HOM05D003764 ORTHO05D004356 1.1e-144 517.3 437 57.4
VMungo1309G0568 Vigna mungo HOM05D003764 ORTHO05D004356 2.4e-144 516.2 420 60.0
Potri.005G249600 Populus trichocarpa HOM05D003764 ORTHO05D004356 3.2e-144 515.8 447 58.8
AT1G76250 Arabidopsis thaliana HOM05D003764 ORTHO05D004356 4.2e-144 515.4 432 60.0
BcaC08g47274 Brassica carinata HOM05D003764 ORTHO05D004356 4.2e-144 515.4 425 60.7
C06p50220 Brassica napus HOM05D003764 ORTHO05D004356 4.2e-144 515.4 425 60.7
BolC6t40061H Brassica oleracea HOM05D003764 ORTHO05D004356 4.2e-144 515.4 425 60.7
Gorai.002G118500 Gossypium raimondii HOM05D003764 ORTHO05D004356 4.2e-144 515.4 414 59.2
Glyma.06G018900 Glycine max HOM05D003764 ORTHO05D004356 7.1e-144 514.6 422 59.5
Gohir.D01G093100 Gossypium hirsutum HOM05D003764 ORTHO05D004356 1.2e-143 513.8 414 58.9
Hund01762 Selenicereus undatus HOM05D003764 ORTHO05D004356 1.2e-143 513.8 408 61.8
TAR628G1614 Trochodendron aralioides HOM05D003764 ORTHO05D004356 1.2e-143 513.8 352 66.2
Sabra05G0193100 Salix brachista HOM05D003764 ORTHO05D004356 2.1e-143 513.1 423 61.5
Lj4A804T73 Lonicera japonica HOM05D003764 ORTHO05D004356 3.5e-143 512.3 407 62.9
unitig_747.g21519 Utricularia gibba HOM05D003764 ORTHO05D004356 6.0e-143 511.5 417 61.9
Medtr3g115180 Medicago truncatula HOM05D003764 ORTHO05D004356 7.9e-143 511.1 419 59.2
Prupe.1G355100 Prunus persica HOM05D003764 ORTHO05D004356 1.3e-142 510.4 430 58.4
Thecc.08G057700 Theobroma cacao HOM05D003764 ORTHO05D004356 1.3e-142 510.4 430 57.0
Sabra02G0008800 Salix brachista HOM05D003764 ORTHO05D004356 1.8e-142 510.0 357 68.3
CiPaw.07G139600 Carya illinoinensis HOM05D003764 ORTHO05D004356 2.3e-142 509.6 433 58.7
Ca_15440_v3 Cicer arietinum L. HOM05D003764 ORTHO05D004356 2.3e-142 509.6 416 59.6
A07p41820 Brassica napus HOM05D003764 ORTHO05D004356 3.0e-142 509.2 425 60.0
TPR.G38113 Trifolium pratense HOM05D003764 ORTHO05D004356 3.0e-142 509.2 415 60.2
Aqoxy6G01751 Aquilegia oxysepala HOM05D003764 ORTHO05D004356 3.9e-142 508.8 428 57.9
BraA07t30497Z Brassica rapa HOM05D003764 ORTHO05D004356 3.9e-142 508.8 417 59.7
Carub.0002s2314 Capsella rubella HOM05D003764 ORTHO05D004356 3.9e-142 508.8 424 59.7
A07p28580 Brassica napus HOM05D003764 ORTHO05D004356 5.1e-142 508.4 417 59.7
BraA07t31712Z Brassica rapa HOM05D003764 ORTHO05D004356 5.1e-142 508.4 425 60.0
MBI08_g19981_MAGBIO Magnolia biondii HOM05D003764 ORTHO05D004356 6.7e-142 508.1 410 60.2
Sp5g31390 Schrenkiella parvula HOM05D003764 ORTHO05D004356 6.7e-142 508.1 434 58.3
PSO210G7283 Papaver somniferum HOM05D003764 ORTHO05D004356 1.1e-141 507.3 451 56.5
Thhalv10018564m.g Eutrema salsugineum HOM05D003764 ORTHO05D004356 1.9e-141 506.5 353 67.1
Glyma.04G018600 Glycine max HOM05D003764 ORTHO05D004356 1.9e-141 506.5 421 58.9
Gorai.009G188300 Gossypium raimondii HOM05D003764 ORTHO05D004356 5.6e-141 505.0 416 58.2
Ah.00g000380 Amaranthus hybridus HOM05D003764 ORTHO05D004356 9.6e-141 504.2 345 68.4
CARHR069810 Cardamine hirsuta HOM05D003764 ORTHO05D004356 1.3e-140 503.8 428 57.9
Gohir.A05G180000 Gossypium hirsutum HOM05D003764 ORTHO05D004356 1.3e-140 503.8 416 57.9
Aa31LG4G6340 Aethionema arabicum HOM05D003764 ORTHO05D004356 1.6e-140 503.4 431 56.8
AUR62036887 Chenopodium quinoa HOM05D003764 ORTHO05D004356 1.6e-140 503.4 402 62.2
CANSAT25G3149 Cannabis sativa HOM05D003764 ORTHO05D004356 3.7e-140 502.3 436 57.6
Potri.002G011400 Populus trichocarpa HOM05D003764 ORTHO05D004356 8.2e-140 501.1 436 58.5
BcaB02g07057 Brassica carinata HOM05D003764 ORTHO05D004356 1.4e-139 500.4 414 59.2
BcaC08g45536 Brassica carinata HOM05D003764 ORTHO05D004356 1.4e-139 500.4 414 58.7
C06p32120 Brassica napus HOM05D003764 ORTHO05D004356 1.4e-139 500.4 414 58.7
BolC6t38338H Brassica oleracea HOM05D003764 ORTHO05D004356 1.4e-139 500.4 414 58.7
AUR62043557 Chenopodium quinoa HOM05D003764 ORTHO05D004356 1.4e-139 500.4 403 61.0
Phvul.009G021800 Phaseolus vulgaris HOM05D003764 ORTHO05D004356 1.4e-139 500.4 424 57.8
CANSAT80G1902 Cannabis sativa HOM05D003764 ORTHO05D004356 1.8e-139 500.0 437 58.4
Sed0020753 Sechium edule HOM05D003764 ORTHO05D004356 2.4e-139 499.6 403 59.8
Gohir.A01G106600 Gossypium hirsutum HOM05D003764 ORTHO05D004356 5.3e-139 498.4 416 57.0
BcaC08g47123 Brassica carinata HOM05D003764 ORTHO05D004356 1.2e-138 497.3 425 57.9
Gohir.D05G183000 Gossypium hirsutum HOM05D003764 ORTHO05D004356 4.5e-138 495.4 416 57.7
CSS0020809 Camellia sinensis var. sinensis HOM05D003764 ORTHO05D004356 5.8e-138 495.0 378 63.8
ClCG11G018640 Citrullus lanatus HOM05D003764 ORTHO05D004356 5.8e-138 495.0 426 55.9
Lalb_Chr11g0061681 Lupinus albus HOM05D003764 ORTHO05D004356 5.8e-138 495.0 405 59.5
COL.COLO4_03998 Corchorus olitorius HOM05D003764 ORTHO05D004356 1.0e-137 494.2 422 57.1
PSO170G5992 Papaver somniferum HOM05D003764 ORTHO05D004356 1.3e-137 493.8 456 54.8
Eucgr.F03548 Eucalyptus grandis HOM05D003764 ORTHO05D004356 4.9e-137 491.9 414 58.7
Lsat_1_v5_gn_2_6240 Lactuca sativa HOM05D003764 ORTHO05D004356 4.9e-137 491.9 419 58.2
Sc02g0009060 Simmondsia chinensis HOM05D003764 ORTHO05D004356 1.4e-136 490.3 410 59.0
Psat0s5633g0040 Pisum sativum HOM05D003764 ORTHO05D004356 2.7e-135 486.1 415 58.8
EL10Ac1g01980 Beta vulgaris HOM05D003764 ORTHO05D004356 3.5e-135 485.7 412 58.7
CsaV3_4G037170 Cucumis sativus L. HOM05D003764 ORTHO05D004356 1.3e-134 483.8 417 55.2
Duzib093G1245 Durio zibethinus HOM05D003764 ORTHO05D004356 3.0e-134 482.6 410 57.1
SHI08003 Sapria himalayana HOM05D003764 ORTHO05D004356 3.9e-134 482.3 414 57.2
Lalb_Chr23g0265831 Lupinus albus HOM05D003764 ORTHO05D004356 3.3e-133 479.2 405 57.8
MELO3C017015.2 Cucumis melo HOM05D003764 ORTHO05D004356 7.4e-133 478.0 429 54.3
HanXRQChr14g0428241 Helianthus annuus HOM05D003764 ORTHO05D004356 1.3e-132 477.2 426 56.6
Peaxi162Scf00064g01016 Petunia axillaris HOM05D003764 ORTHO05D004356 1.4e-131 473.8 355 65.9
ATR0106G001 Amborella trichopoda HOM05D003764 ORTHO05D004356 3.8e-129 465.7 419 53.2
CDE06G1096 Ceratophyllum demersum HOM05D003764 ORTHO05D004356 3.6e-127 459.1 344 61.3
HanXRQChr15g0491851 Helianthus annuus HOM05D003764 ORTHO05D004356 1.1e-123 447.6 342 60.8
PSO170G6284 Papaver somniferum HOM05D003764 ORTHO05D004356 9.1e-123 444.5 407 55.3
Sabra02G0008700 Salix brachista HOM05D003764 ORTHO05D004356 1.3e-121 440.7 390 58.2
PSO170G2421 Papaver somniferum HOM05D003764 ORTHO05D004356 5.0e-121 438.7 429 53.1
PSO017G3905 Papaver somniferum HOM05D003764 ORTHO05D004356 6.5e-121 438.3 344 60.2
PSO017G1302 Papaver somniferum HOM05D003764 ORTHO05D004356 8.5e-121 438.0 414 54.3
PSO104G0104 Papaver somniferum HOM05D003764 ORTHO05D004356 1.1e-120 437.6 418 52.9
PSO017G4841 Papaver somniferum HOM05D003764 ORTHO05D004356 1.2e-119 434.1 429 52.0
Cfa014062 Carpinus fangiana HOM05D003764 ORTHO05D004356 3.6e-119 432.6 430 52.6
PSO170G4333 Papaver somniferum HOM05D003764 ORTHO05D004356 7.9e-119 431.4 427 52.5
Cpa.g.sc26.208 Carica papaya HOM05D003764 ORTHO05D004356 1.0e-118 431.0 292 65.8
PSO017G3919 Papaver somniferum HOM05D003764 ORTHO05D004356 3.0e-118 429.5 423 53.0
PSO170G1328 Papaver somniferum HOM05D003764 ORTHO05D004356 6.7e-118 428.3 409 54.3
PSO017G1698 Papaver somniferum HOM05D003764 ORTHO05D004356 8.8e-118 427.9 403 53.8
PSO017G1063 Papaver somniferum HOM05D003764 ORTHO05D004356 2.0e-117 426.8 385 55.3
HPP92_026195 Vanilla planifolia HOM05D003764 ORTHO05D004356 3.3e-117 426.0 344 57.6
PSO170G3515 Papaver somniferum HOM05D003764 ORTHO05D004356 4.4e-117 425.6 416 52.9
THA.LOC104813245 Tarenaya hassleriana HOM05D003764 ORTHO05D004356 6.3e-116 421.8 455 49.9
HPP92_022192 Vanilla planifolia HOM05D003764 ORTHO05D004356 2.9e-113 412.9 398 50.8
HPP92_022186 Vanilla planifolia HOM05D003764 ORTHO05D004356 5.5e-112 408.7 402 51.0
unitig_699.g19216 Utricularia gibba HOM05D003764 ORTHO05D004356 3.9e-110 402.5 350 54.0
unitig_747.g21882 Utricularia gibba HOM05D003764 ORTHO05D004356 2.0e-109 400.2 445 47.0
unitig_0.g1266 Utricularia gibba HOM05D003764 ORTHO05D004356 3.3e-109 399.4 350 54.0
DCAR_013910 Daucus carota HOM05D003764 ORTHO05D004356 2.6e-106 389.8 435 49.7
HPP92_026182 Vanilla planifolia HOM05D003764 ORTHO05D004356 5.9e-106 388.7 310 58.4
unitig_699.g19217 Utricularia gibba HOM05D003764 ORTHO05D004356 1.7e-105 387.1 352 52.8
MD15G1002800 Malus domestica HOM05D003764 ORTHO05D004356 1.9e-104 383.6 250 69.6
SEGI_06086 Sequoiadendron giganteum HOM05D003764 ORTHO05D004356 2.3e-102 376.7 398 48.7
SEGI_23487 Sequoiadendron giganteum HOM05D003764 ORTHO05D004356 6.7e-102 375.2 343 52.5
CDE07G0072 Ceratophyllum demersum HOM05D003764 ORTHO05D004356 1.7e-100 370.5 305 57.4
TWI12G0241 Tripterygium wilfordii HOM05D003764 ORTHO05D004356 5.9e-98 362.1 252 63.5
Pp3c14_15070 Physcomitrium patens HOM05D003764 ORTHO05D004356 2.1e-95 353.6 358 49.2
AagrBONN_evm.TU.Sc2ySwM_228.3221 Anthoceros agrestis HOM05D003764 ORTHO05D004356 8.0e-95 351.7 358 47.2
A09p51670 Brassica napus HOM05D003764 ORTHO05D004356 6.3e-92 342.0 244 64.3
Mapoly0006s0188 Marchantia polymorpha HOM05D003764 ORTHO05D004356 1.1e-91 341.3 409 41.8
Sabra02G0009000 Salix brachista HOM05D003764 ORTHO05D004356 1.4e-91 340.9 240 66.2
Mapoly0049s0068 Marchantia polymorpha HOM05D003764 ORTHO05D004356 2.0e-90 337.0 338 49.1
Zm00001eb209300 Zea mays HOM05D003764 ORTHO05D004356 1.9e-88 330.5 432 43.5
SMO141G0079 Selaginella moellendorffii HOM05D003764 ORTHO05D004356 1.8e-86 323.9 348 46.0
HanXRQChr14g0428221 Helianthus annuus HOM05D003764 ORTHO05D004356 2.8e-84 316.6 237 59.5
Atru.chr13.152 Acer truncatum HOM05D003764 ORTHO05D004356 1.7e-81 307.4 277 58.5
ECA238G1445 Erigeron canadensis HOM05D003764 ORTHO05D004356 1.9e-80 303.9 237 57.8
SMO147G0236 Selaginella moellendorffii HOM05D003764 ORTHO05D004356 1.6e-79 300.8 347 42.7
AagrBONN_evm.TU.Sc2ySwM_368.3397 Anthoceros agrestis HOM05D003764 ORTHO05D004356 2.2e-76 290.4 301 46.5
unitig_52.g17754 Utricularia gibba HOM05D003764 ORTHO05D004356 1.1e-75 288.1 241 54.4
Pp3c2_5370 Physcomitrium patens HOM05D003764 ORTHO05D004356 9.2e-75 285.0 411 38.0
Pp3c1_32600 Physcomitrium patens HOM05D003764 ORTHO05D004356 3.5e-74 283.1 339 42.5
SMO364G0266 Selaginella moellendorffii HOM05D003764 ORTHO05D004356 1.0e-73 281.6 346 39.6
Pp3c17_5840 Physcomitrium patens HOM05D003764 ORTHO05D004356 1.7e-73 280.8 421 39.4
Pp3c17_7390 Physcomitrium patens HOM05D003764 ORTHO05D004356 1.7e-73 280.8 359 41.2
SMO367G1018 Selaginella moellendorffii HOM05D003764 ORTHO05D004356 1.2e-69 268.1 343 40.2
CBR_g3019 Chara braunii HOM05D003764 ORTHO05D004356 5.4e-59 232.6 374 36.1
Aqoxy6G01618 Aquilegia oxysepala HOM05D003764 ORTHO05D004356 1.4e-38 164.9 149 57.7
DCAR_010127 Daucus carota HOM05D003764 ORTHO05D004356 3.1e-38 163.7 154 56.5
CBR_g9154 Chara braunii HOM05D003764 ORTHO05D004356 4.9e-36 156.4 415 28.9
ATR0756G001 Amborella trichopoda HOM05D003764 ORTHO05D004356 2.4e-22 110.9 114 43.0
Cfa013034 Carpinus fangiana HOM05D003764 ORTHO05D004356 2.6e-21 107.5 85 52.9
Os02g0119600 Oryza sativa ssp. japonica HOM05D003764 ORTHO05D004356 4.9e-20 103.2 79 53.2
SMO170G0013 Selaginella moellendorffii HOM05D003764 ORTHO05D004356 4.2e-19 100.1 119 40.3
ATR0276G001 Amborella trichopoda HOM05D003764 ORTHO05D004356 4.3e-16 90.1 118 34.7
Potri.012G136700 Populus trichocarpa HOM05D003764 ORTHO05D004356 3.8e-12 77.0 123 43.1
ATR0138G019 Amborella trichopoda HOM05D003764 ORTHO05D004356 6.5e-12 76.3 128 39.1
ATR0555G001 Amborella trichopoda HOM05D003764 ORTHO05D004356 3.9e-09 67.0 67 38.8
SMO176G0018 Selaginella moellendorffii HOM05D011762 ORTHO05D004356 6.9e-06 56.2 65 40.0


User provided reference genes

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