Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.25248 Avicennia marina HOM05D005472 ORTHO05D005897 6.0e-121 437.6 228 100.0
MSTRG.1192 Avicennia marina HOM05D005472 ORTHO05D005897 5.1e-64 248.4 198 68.7
Migut.C00835 Erythranthe guttata HOM05D005472 ORTHO05D005897 5.9e-44 181.8 192 57.8
SalBow7G1801 Salvia bowleyana HOM05D005472 ORTHO05D005897 1.9e-42 176.8 172 59.3
Oeu054693.1 Olea europaea HOM05D005472 ORTHO05D005897 5.0e-35 152.1 161 55.3
Oeu007327.1 Olea europaea HOM05D005472 ORTHO05D005897 4.1e-29 132.5 230 41.7
Dinv31847 Davidia involucrata HOM05D005472 ORTHO05D005897 7.3e-26 121.7 170 47.1
SGA_v2.0_scaffold11G05917 Striga asiatica HOM05D005472 ORTHO05D005897 2.1e-25 120.2 211 43.6
Solyc04g081450.3 Solanum lycopersicum HOM05D005472 ORTHO05D005897 4.7e-25 119.0 197 42.1
Sopen04g035060 Solanum pennellii HOM05D005472 ORTHO05D005897 2.3e-24 116.7 197 41.6
Nitab4.5_0002561g0030 Nicotiana tabacum HOM05D005472 ORTHO05D005897 1.5e-23 114.0 189 41.3
Lj4A797T57 Lonicera japonica HOM05D005472 ORTHO05D005897 3.4e-23 112.8 179 43.6
Cc10_g01680 Coffea canephora HOM05D005472 ORTHO05D005897 2.9e-22 109.8 180 40.6
Actinidia15422 Actinidia chinensis HOM05D005472 ORTHO05D005897 4.9e-22 109.0 176 43.2
Cfa013951 Carpinus fangiana HOM05D005472 ORTHO05D005897 4.9e-22 109.0 165 44.8
QL02p011634 Quercus lobata HOM05D005472 ORTHO05D005897 3.2e-21 106.3 164 45.7
TAR628G1150 Trochodendron aralioides HOM05D005472 ORTHO05D005897 5.4e-21 105.5 190 37.4
Prupe.1G365300 Prunus persica HOM05D005472 ORTHO05D005897 7.0e-21 105.1 182 39.0
CAN.G311.30 Capsicum annuum HOM05D005472 ORTHO05D005897 3.5e-20 102.8 157 43.9
PGSC0003DMG400009864 Solanum tuberosum HOM05D005472 ORTHO05D005897 3.5e-20 102.8 190 38.9
RcHm_v2.0_Chr6g0302861 Rosa chinensis HOM05D005472 ORTHO05D005897 4.6e-20 102.4 171 37.4
Peaxi162Scf00438g00827 Petunia axillaris HOM05D005472 ORTHO05D005897 1.0e-19 101.3 195 36.9
Atru.chr13.291 Acer truncatum HOM05D005472 ORTHO05D005897 1.3e-19 100.9 221 35.3
Sed0019370 Sechium edule HOM05D005472 ORTHO05D005897 2.3e-19 100.1 195 38.5
Haze_22634 Corylus avellana HOM05D005472 ORTHO05D005897 3.0e-19 99.8 204 36.8
Duzib041G0268 Durio zibethinus HOM05D005472 ORTHO05D005897 5.0e-19 99.0 162 37.0
TWI36G1185 Tripterygium wilfordii HOM05D005472 ORTHO05D005897 5.0e-19 99.0 189 40.2
Sabra05G0185100 Salix brachista HOM05D005472 ORTHO05D005897 1.1e-18 97.8 222 36.0
CsaV3_3G045880 Cucumis sativus L. HOM05D005472 ORTHO05D005897 1.5e-18 97.4 180 37.8
unitig_0.g2085 Utricularia gibba HOM05D005472 ORTHO05D005897 1.5e-18 97.4 188 38.8
SGA_v2.0_scaffold92G28230 Striga asiatica HOM05D005472 ORTHO05D005897 1.9e-18 97.1 106 51.9
ClCG05G018260 Citrullus lanatus HOM05D005472 ORTHO05D005897 5.6e-18 95.5 171 38.6
CANSAT25G0086 Cannabis sativa HOM05D005472 ORTHO05D005897 1.2e-17 94.4 164 40.2
CiPaw.07G149800 Carya illinoinensis HOM05D005472 ORTHO05D005897 1.2e-17 94.4 166 41.0
Lalb_Chr20g0120221 Lupinus albus HOM05D005472 ORTHO05D005897 2.8e-17 93.2 158 41.1
THA.LOC104809508 Tarenaya hassleriana HOM05D005472 ORTHO05D005897 2.8e-17 93.2 197 37.1
FAN27G2825 Fragaria x ananassa HOM05D005472 ORTHO05D005897 6.2e-17 92.0 195 36.4
TWI12G0454 Tripterygium wilfordii HOM05D005472 ORTHO05D005897 6.2e-17 92.0 174 38.5
CSS0003502 Camellia sinensis var. sinensis HOM05D005472 ORTHO05D005897 1.1e-16 91.3 150 42.0
FvH4_2g38440 Fragaria vesca HOM05D005472 ORTHO05D005897 1.1e-16 91.3 172 35.5
FAN15G2782 Fragaria x ananassa HOM05D005472 ORTHO05D005897 1.1e-16 91.3 226 31.9
MELO3C003750.2 Cucumis melo HOM05D005472 ORTHO05D005897 5.2e-16 89.0 170 38.2
Eucgr.F00587 Eucalyptus grandis HOM05D005472 ORTHO05D005897 5.2e-16 89.0 196 33.2
THA.LOC104811410 Tarenaya hassleriana HOM05D005472 ORTHO05D005897 5.2e-16 89.0 157 38.2
Potri.005G239500 Populus trichocarpa HOM05D005472 ORTHO05D005897 6.8e-16 88.6 240 32.9
Thecc.08G044600 Theobroma cacao HOM05D005472 ORTHO05D005897 6.8e-16 88.6 158 36.1
GSVIVG01009906001 Vitis vinifera HOM05D005472 ORTHO05D005897 8.9e-16 88.2 167 40.7
AUR62041912 Chenopodium quinoa HOM05D005472 ORTHO05D005897 1.2e-15 87.8 195 34.4
AUR62033908 Chenopodium quinoa HOM05D005472 ORTHO05D005897 1.5e-15 87.4 147 42.9
Sabra02G0018300 Salix brachista HOM05D005472 ORTHO05D005897 3.4e-15 86.3 172 37.2
Cpa.g.sc26.42 Carica papaya HOM05D005472 ORTHO05D005897 5.8e-15 85.5 159 37.7
CiPaw.08G066500 Carya illinoinensis HOM05D005472 ORTHO05D005897 5.8e-15 85.5 188 37.8
Ca_00891_v3 Cicer arietinum L. HOM05D005472 ORTHO05D005897 7.5e-15 85.1 155 40.6
Duzib116G0175 Durio zibethinus HOM05D005472 ORTHO05D005897 9.8e-15 84.7 157 33.8
Potri.002G022200 Populus trichocarpa HOM05D005472 ORTHO05D005897 1.3e-14 84.3 190 35.3
PSO700G0202 Papaver somniferum HOM05D005472 ORTHO05D005897 1.7e-14 84.0 198 32.8
FAN20G3206 Fragaria x ananassa HOM05D005472 ORTHO05D005897 2.2e-14 83.6 226 30.5
PGR031G2834 Punica granatum HOM05D005472 ORTHO05D005897 2.2e-14 83.6 142 41.5
DCAR_023016 Daucus carota HOM05D005472 ORTHO05D005897 2.9e-14 83.2 176 34.7
Actinidia16989 Actinidia chinensis HOM05D005472 ORTHO05D005897 3.7e-14 82.8 139 40.3
Ciclev10001635m.g Citrus clementina HOM05D005472 ORTHO05D005897 6.4e-14 82.0 126 43.7
Sp1g17770 Schrenkiella parvula HOM05D005472 ORTHO05D005897 6.4e-14 82.0 189 32.8
PGR031G2226 Punica granatum HOM05D005472 ORTHO05D005897 8.3e-14 81.6 142 41.5
TAR376G0796 Trochodendron aralioides HOM05D005472 ORTHO05D003948 1.4e-13 80.9 151 37.1
Ah.00g000180 Amaranthus hybridus HOM05D005472 ORTHO05D005897 1.9e-13 80.5 187 33.7
CSS0003212 Camellia sinensis var. sinensis HOM05D005472 ORTHO05D005897 1.9e-13 80.5 139 40.3
PSO170G4377 Papaver somniferum HOM05D005472 ORTHO05D005897 1.9e-13 80.5 185 32.4
Nn1g05892 Nelumbo nucifera HOM05D005472 ORTHO05D005897 2.4e-13 80.1 189 33.9
TPR.G15190 Trifolium pratense HOM05D005472 ORTHO05D005897 2.4e-13 80.1 77 55.8
CAN.G1271.17 Capsicum annuum HOM05D005472 ORTHO05D005897 7.1e-13 78.6 180 36.1
COL.COLO4_26145 Corchorus olitorius HOM05D005472 ORTHO05D005897 9.2e-13 78.2 177 33.3
Sed0011447 Sechium edule HOM05D005472 ORTHO05D005897 9.2e-13 78.2 209 33.5
vmacro07586 Vaccinium macrocarpon HOM05D005472 ORTHO05D005897 9.2e-13 78.2 145 39.3
SHI08069 Sapria himalayana HOM05D005472 ORTHO05D005897 4.6e-12 75.9 159 35.2
BraA07t29336Z Brassica rapa HOM05D005472 ORTHO05D005897 6.0e-12 75.5 170 34.7
Hund05189 Selenicereus undatus HOM05D005472 ORTHO05D005897 6.0e-12 75.5 167 34.1
ClCG08G014280 Citrullus lanatus HOM05D005472 ORTHO05D005897 7.8e-12 75.1 136 39.7
Gohir.A05G257000 Gossypium hirsutum HOM05D005472 ORTHO05D005897 7.8e-12 75.1 184 28.8
Gohir.D05G258500 Gossypium hirsutum HOM05D005472 ORTHO05D005897 1.7e-11 73.9 185 29.2
Gorai.009G270000 Gossypium raimondii HOM05D005472 ORTHO05D005897 1.7e-11 73.9 185 29.2
BcaB03g14419 Brassica carinata HOM05D005472 ORTHO05D005897 2.3e-11 73.6 146 34.9
Manes.05G147400 Manihot esculenta HOM05D005472 ORTHO05D005897 2.3e-11 73.6 177 32.8
EL10Ac1g02216 Beta vulgaris HOM05D005472 ORTHO05D005897 3.0e-11 73.2 171 34.5
Manes.18G013500 Manihot esculenta HOM05D005472 ORTHO05D005897 3.9e-11 72.8 210 33.3
Atru.chr2.2949 Acer truncatum HOM05D005472 ORTHO05D005897 6.6e-11 72.0 81 48.1
BcaB03g14348 Brassica carinata HOM05D005472 ORTHO05D005897 8.6e-11 71.6 204 28.4
VMungo0540G2141 Vigna mungo HOM05D005472 ORTHO05D005897 8.6e-11 71.6 103 44.7
C07p23450 Brassica napus HOM05D005472 ORTHO05D005897 1.1e-10 71.2 202 28.2
CsaV3_2G029530 Cucumis sativus L. HOM05D005472 ORTHO05D005897 1.1e-10 71.2 145 39.3
BolC7t42878H Brassica oleracea HOM05D005472 ORTHO05D005897 1.5e-10 70.9 148 34.5
CDE05G0022 Ceratophyllum demersum HOM05D004890 ORTHO05D005869 1.5e-10 70.9 153 31.4
Gohir.A05G186500 Gossypium hirsutum HOM05D005472 ORTHO05D005897 1.9e-10 70.5 176 30.1
CDE05G3315 Ceratophyllum demersum HOM05D005472 ORTHO05D005897 2.5e-10 70.1 191 30.9
Glyma.15G134600 Glycine max HOM05D005472 ORTHO05D005897 2.5e-10 70.1 73 52.1
Phvul.006G124300 Phaseolus vulgaris HOM05D005472 ORTHO05D005897 2.5e-10 70.1 76 51.3
TWI56G0716 Tripterygium wilfordii HOM05D005472 ORTHO05D005897 2.5e-10 70.1 92 45.7
AT1G19980 Arabidopsis thaliana HOM05D005472 ORTHO05D005897 3.3e-10 69.7 183 32.2
MELO3C011012.2 Cucumis melo HOM05D005472 ORTHO05D005897 4.3e-10 69.3 146 37.7
Ah.11g039690 Amaranthus hybridus HOM05D005472 ORTHO05D005897 7.3e-10 68.6 186 33.3
Medtr2g031630 Medicago truncatula HOM05D005472 ORTHO05D005897 1.2e-09 67.8 173 32.9
Gorai.009G194600 Gossypium raimondii HOM05D005472 ORTHO05D005897 1.6e-09 67.4 176 29.0
Gohir.D05G189400 Gossypium hirsutum HOM05D005472 ORTHO05D005897 2.1e-09 67.0 178 28.7
HanXRQChr11g0322621 Helianthus annuus HOM05D005472 ORTHO05D005897 2.8e-09 66.6 122 40.2
Lj6g0021117 Lotus japonicus HOM05D005472 ORTHO05D005897 2.8e-09 66.6 70 52.9
Psat1g164760 Pisum sativum HOM05D005472 ORTHO05D005897 3.6e-09 66.2 192 32.8
MD15G1012000 Malus domestica HOM05D005472 ORTHO05D005897 1.1e-08 64.7 149 34.2
Aa31LG7G4450 Aethionema arabicum HOM05D005472 ORTHO05D005897 1.8e-08 63.9 159 30.8
HanXRQChr05g0145181 Helianthus annuus HOM05D005472 ORTHO05D005897 2.3e-08 63.5 147 35.4
MBI09_g31922_MAGBIO Magnolia biondii HOM05D005472 ORTHO05D005897 3.1e-08 63.2 87 47.1
Thhalv10008122m.g Eutrema salsugineum HOM05D005472 ORTHO05D005897 5.2e-08 62.4 176 28.4
CARHR020470 Cardamine hirsuta HOM05D005472 ORTHO05D005897 6.8e-08 62.0 180 28.9
Glyma.09G028700 Glycine max HOM05D005472 ORTHO05D005897 6.8e-08 62.0 213 31.0
Carub.0001s1951 Capsella rubella HOM05D005472 ORTHO05D005897 8.9e-08 61.6 163 30.1
BcaB03g12884 Brassica carinata HOM05D005472 ORTHO05D005897 1.2e-07 61.2 183 32.2
vmacro21726 Vaccinium macrocarpon HOM05D005472 ORTHO05D005897 2.0e-07 60.5 145 35.2
Zm00001eb121210 Zea mays HOM05D005472 ORTHO05D005897 2.0e-07 60.5 83 42.2
A08p29540 Brassica napus HOM05D005472 ORTHO05D005897 3.4e-07 59.7 89 40.4
Rhsim06G0021600 Rhododendron simsii HOM05D005472 ORTHO05D005897 8.4e-06 55.1 148 31.1


User provided reference genes

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