Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.25246 Avicennia marina HOM05D007378 ORTHO05D007577 0.0e+00 1242.6 630 100.0
SalBow7G4715 Salvia bowleyana HOM05D007378 ORTHO05D007577 1.3e-117 427.9 634 47.8
Migut.C00828 Erythranthe guttata HOM05D007378 ORTHO05D007577 1.9e-116 424.1 643 46.8
Oeu020868.1 Olea europaea HOM05D007378 ORTHO05D007577 1.6e-107 394.4 570 45.1
Dinv31841 Davidia involucrata HOM05D007378 ORTHO05D007577 1.6e-91 341.3 694 38.9
Dinv39514 Davidia involucrata HOM05D007378 ORTHO05D007577 4.6e-78 296.6 700 35.7
SGA_v2.0_scaffold92G28233 Striga asiatica HOM05D007378 ORTHO05D007577 9.5e-76 288.9 644 38.5
Hma1.2p1_0023F.1_g015450 Hydrangea macrophylla HOM05D007378 ORTHO05D007577 4.1e-71 273.5 687 35.4
CAN.G311.27 Capsicum annuum HOM05D007378 ORTHO05D007577 2.1e-62 244.6 654 33.0
CSS0021578 Camellia sinensis var. sinensis HOM05D007378 ORTHO05D007577 3.3e-60 237.3 728 32.6
QL02p011519 Quercus lobata HOM05D007378 ORTHO05D007577 1.2e-59 235.3 684 31.1
Solyc04g081420.4 Solanum lycopersicum HOM05D007378 ORTHO05D007577 2.3e-58 231.1 658 32.1
Sopen04g035030 Solanum pennellii HOM05D007378 ORTHO05D007577 2.3e-58 231.1 660 32.0
PGSC0003DMG400009935 Solanum tuberosum HOM05D007378 ORTHO05D007577 3.1e-58 230.7 660 32.0
Actinidia15419 Actinidia chinensis HOM05D007378 ORTHO05D007577 2.2e-56 224.6 670 32.1
Nitab4.5_0002561g0040 Nicotiana tabacum HOM05D007378 ORTHO05D007577 7.8e-54 216.1 644 32.0
Thecc.08G043900 Theobroma cacao HOM05D007378 ORTHO05D007577 1.5e-52 211.8 656 30.6
Actinidia16984 Actinidia chinensis HOM05D007378 ORTHO05D007577 9.6e-52 209.1 599 32.7
Duzib093G0923 Durio zibethinus HOM05D007378 ORTHO05D007577 1.2e-51 208.8 695 31.8
COL.COLO4_26152 Corchorus olitorius HOM05D007378 ORTHO05D007577 1.6e-51 208.4 696 30.7
Cc10_g01700 Coffea canephora HOM05D007378 ORTHO05D007577 2.1e-51 208.0 703 31.2
Peaxi162Scf00438g00718 Petunia axillaris HOM05D007378 ORTHO05D007577 4.7e-51 206.8 653 29.9
MD15G1012700 Malus domestica HOM05D007378 ORTHO05D007577 5.2e-50 203.4 700 31.9
SGA_v2.0_scaffold11G05915 Striga asiatica HOM05D007378 ORTHO05D007577 1.7e-48 198.4 589 34.6
Ciclev10000382m.g Citrus clementina HOM05D007378 ORTHO05D007577 2.2e-48 198.0 703 30.2
MD08G1013300 Malus domestica HOM05D007378 ORTHO05D007577 4.2e-47 193.7 681 30.1
Potri.005G238800 Populus trichocarpa HOM05D007378 ORTHO05D007577 1.6e-46 191.8 696 30.5
Haze_22630 Corylus avellana HOM05D007378 ORTHO05D007577 2.7e-46 191.0 692 30.5
Duzib116G0067 Durio zibethinus HOM05D007378 ORTHO05D007577 3.5e-46 190.7 590 33.1
Cfa013945 Carpinus fangiana HOM05D007378 ORTHO05D007577 4.6e-46 190.3 683 31.0
TWI12G0183 Tripterygium wilfordii HOM05D007378 ORTHO05D007577 8.7e-45 186.0 740 28.6
TWI56G0017 Tripterygium wilfordii HOM05D007378 ORTHO05D007577 2.5e-44 184.5 659 31.0
Rhsim07G0247100 Rhododendron simsii HOM05D007378 ORTHO05D007577 7.3e-44 183.0 686 31.9
Prupe.1G365800 Prunus persica HOM05D007378 ORTHO05D007577 8.1e-43 179.5 713 28.3
GSVIVG01009901001 Vitis vinifera HOM05D007378 ORTHO05D007577 8.1e-43 179.5 581 32.4
Manes.05G147800 Manihot esculenta HOM05D007378 ORTHO05D007577 4.0e-42 177.2 667 29.4
TAR381G0696 Trochodendron aralioides HOM05D007378 ORTHO05D007577 4.2e-39 167.2 681 29.4
TWI36G1616 Tripterygium wilfordii HOM05D007378 ORTHO05D007577 2.1e-38 164.9 724 29.0
vmacro21724 Vaccinium macrocarpon HOM05D007378 ORTHO05D007577 2.1e-38 164.9 521 33.8
Sabra02G0018600 Salix brachista HOM05D007378 ORTHO05D007577 2.7e-38 164.5 707 29.7
CiPaw.07G150400 Carya illinoinensis HOM05D007378 ORTHO05D007577 4.6e-38 163.7 616 29.2
DCAR_013867 Daucus carota HOM05D007378 ORTHO05D007577 1.8e-37 161.8 640 29.4
Potri.002G022800 Populus trichocarpa HOM05D007378 ORTHO05D007577 3.9e-37 160.6 698 30.2
Manes.18G013740 Manihot esculenta HOM05D007378 ORTHO05D007577 1.6e-35 155.2 637 29.5
Cpa.g.sc26.38 Carica papaya HOM05D007378 ORTHO05D007577 6.2e-35 153.3 697 27.3
FvH4_2g38520 Fragaria vesca HOM05D007378 ORTHO05D007577 6.2e-35 153.3 721 28.4
Sabra05G0184500 Salix brachista HOM05D007378 ORTHO05D007577 2.4e-34 151.4 701 29.0
RcHm_v2.0_Chr6g0302801 Rosa chinensis HOM05D007378 ORTHO05D007577 6.9e-34 149.8 704 29.0
MBI05_g30742_MAGBIO Magnolia biondii HOM05D007378 ORTHO05D007577 3.4e-33 147.5 687 29.3
CiPaw.08G066200 Carya illinoinensis HOM05D007378 ORTHO05D007577 7.6e-33 146.4 751 26.2
CSS0010969 Camellia sinensis var. sinensis HOM05D007378 ORTHO05D007577 2.2e-32 144.8 420 31.0
Ca_15483_v3 Cicer arietinum L. HOM05D007378 ORTHO05D007577 4.9e-32 143.7 604 27.5
Atru.chr13.296 Acer truncatum HOM05D007378 ORTHO05D007577 1.1e-31 142.5 478 31.6
Eucgr.F00598 Eucalyptus grandis HOM05D007378 ORTHO05D007577 5.5e-31 140.2 670 26.6
TPR.G34540 Trifolium pratense HOM05D007378 ORTHO05D007577 9.3e-31 139.4 662 26.0
Phvul.009G016700 Phaseolus vulgaris HOM05D007378 ORTHO05D007577 1.6e-30 138.7 607 28.5
FAN15G3724 Fragaria x ananassa HOM05D007378 ORTHO05D007577 2.1e-30 138.3 760 27.1
Lj1g0027004 Lotus japonicus HOM05D007378 ORTHO05D007577 4.6e-30 137.1 655 27.9
FAN27G0575 Fragaria x ananassa HOM05D007378 ORTHO05D007577 6.0e-30 136.7 726 27.1
Glyma.04G024500 Glycine max HOM05D007378 ORTHO05D007577 6.0e-30 136.7 639 28.5
Psat5g013200 Pisum sativum HOM05D007378 ORTHO05D007577 7.9e-30 136.3 652 26.8
VMungo1309G2950 Vigna mungo HOM05D007378 ORTHO05D007577 7.9e-30 136.3 635 27.4
FAN20G0665 Fragaria x ananassa HOM05D007378 ORTHO05D007577 1.3e-29 135.6 623 29.2
Medtr3g113840 Medicago truncatula HOM05D007378 ORTHO05D007577 5.1e-29 133.7 631 27.6
PGR031G0679 Punica granatum HOM05D007378 ORTHO05D007577 1.9e-28 131.7 642 28.8
Glyma.06G024600 Glycine max HOM05D007378 ORTHO05D007577 5.6e-28 130.2 635 28.7
Nn5g30152 Nelumbo nucifera HOM05D007378 ORTHO05D007577 1.6e-27 128.6 653 29.1
Lalb_Chr11g0061931 Lupinus albus HOM05D007378 ORTHO05D007577 8.1e-27 126.3 635 26.9
Lj5g0002996 Lotus japonicus HOM05D007378 ORTHO05D007577 2.6e-25 121.3 640 26.9
Aqoxy5G01785 Aquilegia oxysepala HOM05D007378 ORTHO05D007577 3.8e-24 117.5 626 27.6
Glyma.14G219000 Glycine max HOM05D007378 ORTHO05D007577 3.8e-24 117.5 597 27.6
Hund05208 Selenicereus undatus HOM05D007378 ORTHO05D007577 6.5e-24 116.7 658 26.9
Phvul.001G006800 Phaseolus vulgaris HOM05D007378 ORTHO05D007577 1.4e-23 115.5 574 26.8
Duzib041G0283 Durio zibethinus HOM05D007378 ORTHO05D007577 2.5e-23 114.8 336 30.7
AUR62033831 Chenopodium quinoa HOM05D007378 ORTHO05D007577 3.2e-23 114.4 664 25.8
VMungo0647G1459 Vigna mungo HOM05D007378 ORTHO05D007577 5.5e-23 113.6 611 27.0
arahy.Tifrunner.gnm1.ann1.WP2VUZ Arachis hypogaea HOM05D007378 ORTHO05D007577 3.5e-22 110.9 644 26.2
Lalb_Chr08g0246161 Lupinus albus HOM05D007378 ORTHO05D007577 4.6e-22 110.5 597 27.3
Thhalv10018322m.g Eutrema salsugineum HOM05D010473 ORTHO05D007577 7.9e-22 109.8 629 26.9
Duzib041G0240 Durio zibethinus HOM05D007378 ORTHO05D007577 5.1e-21 107.1 197 39.6
CSS0024961 Camellia sinensis var. sinensis HOM05D007378 ORTHO05D007577 1.1e-20 105.9 215 37.2
Ca_13427_v3 Cicer arietinum L. HOM05D007378 ORTHO05D007577 1.5e-20 105.5 617 26.6
PSO700G0360 Papaver somniferum HOM05D007378 ORTHO05D007577 2.5e-20 104.8 544 27.8
CANSAT25G3202 Cannabis sativa HOM05D007378 ORTHO05D007577 5.7e-20 103.6 564 29.4
Glyma.17G258000 Glycine max HOM05D007378 ORTHO05D007577 5.7e-20 103.6 611 25.7
arahy.Tifrunner.gnm1.ann1.KUKA7T Arachis hypogaea HOM05D007378 ORTHO05D007577 9.6e-20 102.8 646 25.7
CSS0029124 Camellia sinensis var. sinensis HOM05D007378 ORTHO05D007577 9.6e-20 102.8 208 38.0
Sp5g30850 Schrenkiella parvula HOM05D010473 ORTHO05D007577 9.6e-20 102.8 636 26.9
Sc15g0005020 Simmondsia chinensis HOM05D007378 ORTHO05D007577 6.3e-19 100.1 612 26.0
AL2G35720 Arabidopsis lyrata HOM05D010473 ORTHO05D007577 1.1e-18 99.4 519 29.1
TPR.G26373 Trifolium pratense HOM05D007378 ORTHO05D007577 3.1e-18 97.8 559 25.6
AT1G75730 Arabidopsis thaliana HOM05D010473 ORTHO05D007577 3.4e-17 94.4 627 26.3
CARHR069140 Cardamine hirsuta HOM05D010473 ORTHO05D007577 3.4e-17 94.4 530 25.1
AUR62035752 Chenopodium quinoa HOM05D007378 ORTHO05D007577 3.4e-17 94.4 341 29.0
Medtr1g025180 Medicago truncatula HOM05D007378 ORTHO05D007577 4.5e-17 94.0 586 25.6
Psat6g003040 Pisum sativum HOM05D007378 ORTHO05D007577 4.5e-17 94.0 560 26.1
PSO170G0005 Papaver somniferum HOM05D007378 ORTHO05D007577 7.6e-17 93.2 534 27.0
TAR625G0788 Trochodendron aralioides HOM05D000628 ORTHO05D001121 2.9e-16 91.3 149 41.6
BcaB05g24937 Brassica carinata HOM05D010473 ORTHO05D007577 6.5e-16 90.1 647 25.8
Carub.0002s2258 Capsella rubella HOM05D010473 ORTHO05D007577 6.5e-16 90.1 521 26.3
vmacro04350 Vaccinium macrocarpon HOM05D007378 ORTHO05D007577 7.2e-15 86.7 306 30.7
C02p33740 Brassica napus HOM05D010473 ORTHO05D007577 1.6e-14 85.5 436 27.8
BraA07t31661Z Brassica rapa HOM05D010473 ORTHO05D007577 1.6e-14 85.5 619 24.2
THA.LOC104814031 Tarenaya hassleriana HOM05D010473 ORTHO05D007577 7.9e-14 83.2 346 32.1
A07p41260 Brassica napus HOM05D010473 ORTHO05D007577 3.9e-13 80.9 613 23.7
A02p20200 Brassica napus HOM05D010473 ORTHO05D007577 6.7e-13 80.1 503 27.8
Lj4A25T50 Lonicera japonica HOM05D007378 ORTHO05D007577 1.1e-12 79.3 247 30.8
BcaC03g15618 Brassica carinata HOM05D010473 ORTHO05D007577 3.3e-12 77.8 526 26.8
BcaC08g47058 Brassica carinata HOM05D010473 ORTHO05D007577 1.6e-11 75.5 145 39.3
Aa31LG4G5960 Aethionema arabicum HOM05D010473 ORTHO05D007577 1.1e-10 72.8 652 24.2
BolC2t09331H Brassica oleracea HOM05D010473 ORTHO05D007577 1.1e-10 72.8 498 27.3
BraA02t07054Z Brassica rapa HOM05D010473 ORTHO05D007577 3.1e-10 71.2 516 26.6
C06p49680 Brassica napus HOM05D010473 ORTHO05D007577 5.3e-10 70.5 326 28.2
BolC6t40007H Brassica oleracea HOM05D010473 ORTHO05D007577 2.6e-09 68.2 332 26.8
ATR0152G004 Amborella trichopoda HOM05D007378 ORTHO05D007577 5.0e-08 63.9 474 24.1
BcaC03g15614 Brassica carinata HOM05D010473 ORTHO05D007577 2.1e-06 58.5 292 27.1
HanXRQChr13g0386641 Helianthus annuus HOM05D048618 ORTHO05D048210 7.9e-06 56.6 129 36.4


User provided reference genes

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