Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.25027 Avicennia marina HOM05D005116 ORTHO05D005937 1.3e-103 379.8 203 100.0
Migut.M00082 Erythranthe guttata HOM05D005116 ORTHO05D005937 5.3e-44 181.8 206 56.3
SalBow7G1661 Salvia bowleyana HOM05D002934 ORTHO05D003937 7.4e-38 161.4 228 48.7
Oeu035627.2 Olea europaea HOM05D005116 ORTHO05D005937 2.5e-33 146.4 283 41.7
unitig_748.g8536 Utricularia gibba HOM05D005116 ORTHO05D005937 8.2e-29 131.3 203 46.3
Solyc07g053860.3 Solanum lycopersicum HOM05D005116 ORTHO05D005937 1.9e-22 110.2 239 40.2
Sopen07g027830 Solanum pennellii HOM05D005116 ORTHO05D005937 5.7e-22 108.6 244 39.8
Lsat_1_v5_gn_4_29780 Lactuca sativa HOM05D005116 ORTHO05D005937 1.3e-21 107.5 220 40.5
SGA_v2.0_scaffold108G30901 Striga asiatica HOM05D005116 ORTHO05D005937 1.6e-21 107.1 201 41.8
Actinidia11090 Actinidia chinensis HOM05D005116 ORTHO05D005937 4.8e-21 105.5 237 37.1
Lj8A109T77 Lonicera japonica HOM05D005116 ORTHO05D005937 1.4e-20 104.0 251 38.6
Nitab4.5_0004959g0030 Nicotiana tabacum HOM05D005116 ORTHO05D005937 1.4e-20 104.0 235 40.0
GSVIVG01020569001 Vitis vinifera HOM05D005116 ORTHO05D005937 4.1e-20 102.4 258 36.8
Actinidia11017 Actinidia chinensis HOM05D005116 ORTHO05D005937 1.5e-19 100.5 270 33.0
MD09G1244900 Malus domestica HOM05D005116 ORTHO05D005937 2.0e-19 100.1 258 33.7
MBI07_g40350_MAGBIO Magnolia biondii HOM05D005116 ORTHO05D005937 3.4e-19 99.4 213 37.6
PSO832G2322 Papaver somniferum HOM05D005116 ORTHO05D005937 4.5e-19 99.0 246 38.6
PSO210G2339 Papaver somniferum HOM05D005116 ORTHO05D005937 5.9e-19 98.6 246 37.8
TAR627G0112 Trochodendron aralioides HOM05D005116 ORTHO05D005937 5.9e-19 98.6 283 36.0
DCAR_013025 Daucus carota HOM05D005116 ORTHO05D005937 3.8e-18 95.9 125 56.8
TAR629G1139 Trochodendron aralioides HOM05D005116 ORTHO05D005937 2.5e-17 93.2 283 34.3
Nitab4.5_0006721g0020 Nicotiana tabacum HOM05D005116 ORTHO05D005937 4.2e-17 92.4 241 34.9
Sed0010367 Sechium edule HOM05D005116 ORTHO05D005937 7.2e-17 91.7 257 36.6
Duzib052G0489 Durio zibethinus HOM05D005116 ORTHO05D005937 9.4e-17 91.3 273 34.1
CANSAT64G0665 Cannabis sativa HOM05D005116 ORTHO05D005937 1.6e-16 90.5 255 34.1
Gohir.D01G017400 Gossypium hirsutum HOM05D005116 ORTHO05D005937 2.1e-16 90.1 277 35.0
Thecc.06G001400 Theobroma cacao HOM05D005116 ORTHO05D005937 2.1e-16 90.1 274 35.0
Eucgr.A01831 Eucalyptus grandis HOM05D005116 ORTHO05D005937 2.7e-16 89.7 259 34.4
Ciclev10015278m.g Citrus clementina HOM05D005116 ORTHO05D005937 3.6e-16 89.4 278 33.8
CsaV3_6G012810 Cucumis sativus L. HOM05D005116 ORTHO05D005937 3.6e-16 89.4 250 34.0
COL.COLO4_05946 Corchorus olitorius HOM05D005116 ORTHO05D005937 6.1e-16 88.6 276 33.7
RcHm_v2.0_Chr7g0225641 Rosa chinensis HOM05D005116 ORTHO05D005937 6.1e-16 88.6 247 35.2
Aqoxy4G00731 Aquilegia oxysepala HOM05D005116 ORTHO05D005937 1.0e-15 87.8 232 37.1
FvH4_5g30750 Fragaria vesca HOM05D005116 ORTHO05D005937 1.8e-15 87.0 251 37.1
Gorai.002G019600 Gossypium raimondii HOM05D005116 ORTHO05D005937 1.8e-15 87.0 267 36.3
Dinv13395 Davidia involucrata HOM05D005116 ORTHO05D005937 2.3e-15 86.7 273 32.6
MELO3C013631.2 Cucumis melo HOM05D005116 ORTHO05D005937 5.1e-15 85.5 244 32.8
CiPaw.03G178700 Carya illinoinensis HOM05D005116 ORTHO05D005937 6.7e-15 85.1 297 34.0
RcHm_v2.0_Chr4g0410421 Rosa chinensis HOM05D005116 ORTHO05D005937 1.1e-14 84.3 247 36.8
ClCG02G017750 Citrullus lanatus HOM05D005116 ORTHO05D005937 1.5e-14 84.0 243 34.2
Gohir.A01G018800 Gossypium hirsutum HOM05D005116 ORTHO05D005937 1.5e-14 84.0 276 34.1
Atru.chr6.2899 Acer truncatum HOM05D005116 ORTHO05D005937 4.3e-14 82.4 92 57.6
Phvul.011G115315 Phaseolus vulgaris HOM05D005116 ORTHO05D005937 9.7e-14 81.3 256 34.8
ECA234G2480 Erigeron canadensis HOM05D005116 ORTHO05D005937 1.3e-13 80.9 264 34.8
Sc09g0004750 Simmondsia chinensis HOM05D005116 ORTHO05D005937 1.7e-13 80.5 245 33.1
CSS0036411 Camellia sinensis var. sinensis HOM05D005116 ORTHO05D005937 2.8e-13 79.7 288 34.7
Glyma.12G116000 Glycine max HOM05D005116 ORTHO05D005937 2.8e-13 79.7 256 32.4
C08p00750 Brassica napus HOM05D005116 ORTHO05D031782 3.7e-13 79.3 179 34.1
Sp1g02620 Schrenkiella parvula HOM05D005116 ORTHO05D005937 4.8e-13 79.0 283 29.0
arahy.Tifrunner.gnm1.ann1.KES1NF Arachis hypogaea HOM05D005116 ORTHO05D005937 6.3e-13 78.6 254 33.5
Thhalv10007808m.g Eutrema salsugineum HOM05D005116 ORTHO05D005937 8.2e-13 78.2 275 29.5
Lalb_Chr03g0029531 Lupinus albus HOM05D005116 ORTHO05D005937 8.2e-13 78.2 255 29.0
arahy.Tifrunner.gnm1.ann1.3GE2A8 Arachis hypogaea HOM05D005116 ORTHO05D005937 1.1e-12 77.8 254 33.5
RhsimUnG0145200 Rhododendron simsii HOM05D005116 ORTHO05D005937 1.1e-12 77.8 294 30.3
CSS0044850 Camellia sinensis var. sinensis HOM05D005116 ORTHO05D005937 5.3e-12 75.5 300 31.3
FAN13G1308 Fragaria x ananassa HOM05D005116 ORTHO05D005937 5.3e-12 75.5 284 32.4
Cc00_g12320 Coffea canephora HOM05D005116 ORTHO05D005937 9.1e-12 74.7 170 37.6
Rhsim06G0139500 Rhododendron simsii HOM05D005116 ORTHO05D005937 9.1e-12 74.7 293 29.4
CAN.G209.35 Capsicum annuum HOM05D005116 ORTHO05D005937 1.2e-11 74.3 253 32.8
Carub.0001s0286 Capsella rubella HOM05D005116 ORTHO05D005937 2.6e-11 73.2 279 28.3
Potri.017G012500 Populus trichocarpa HOM05D005116 ORTHO05D005937 2.6e-11 73.2 274 31.4
EL10Ac5g11143 Beta vulgaris HOM05D005116 ORTHO05D005937 3.4e-11 72.8 232 31.5
AUR62029845 Chenopodium quinoa HOM05D005116 ORTHO05D005937 3.4e-11 72.8 252 31.3
HanXRQChr15g0470251 Helianthus annuus HOM05D005116 ORTHO05D005937 5.9e-11 72.0 262 30.5
Manes.13G144900 Manihot esculenta HOM05D005116 ORTHO05D005937 5.9e-11 72.0 91 53.8
AUR62025873 Chenopodium quinoa HOM05D005116 ORTHO05D005937 7.7e-11 71.6 253 29.6
Ciclev10015471m.g Citrus clementina HOM05D005116 ORTHO05D005937 7.7e-11 71.6 94 53.2
AT1G03760 Arabidopsis thaliana HOM05D005116 ORTHO05D005937 1.0e-10 71.2 269 29.0
Duzib248G1083 Durio zibethinus HOM05D005116 ORTHO05D005937 1.0e-10 71.2 296 29.7
Cpa.g.sc83.62 Carica papaya HOM05D005116 ORTHO05D005937 1.3e-10 70.9 296 31.1
Prupe.4G278300 Prunus persica HOM05D005116 ORTHO05D005937 2.2e-10 70.1 139 43.9
Sc09g0006700 Simmondsia chinensis HOM05D005116 ORTHO05D005937 3.8e-10 69.3 106 43.4
HanXRQChr16g0525341 Helianthus annuus HOM05D005116 ORTHO05D005937 5.0e-10 68.9 269 31.2
PGR042G3305 Punica granatum HOM05D005116 ORTHO05D005937 5.0e-10 68.9 245 33.1
CARHR003090 Cardamine hirsuta HOM05D005116 ORTHO05D005937 8.5e-10 68.2 288 27.1
Ca_18939_v3 Cicer arietinum L. HOM05D005116 ORTHO05D005937 1.4e-09 67.4 239 31.4
Hund01029 Selenicereus undatus HOM05D005116 ORTHO05D005937 1.4e-09 67.4 130 38.5
TWI59G1245 Tripterygium wilfordii HOM05D005116 ORTHO05D005937 1.9e-09 67.0 85 51.8
Oeu044722.1 Olea europaea HOM05D005116 ORTHO05D005937 3.2e-09 66.2 101 43.6
Ah.09g227990 Amaranthus hybridus HOM05D005116 ORTHO05D005937 4.2e-09 65.9 76 48.7
BcaC07g36946 Brassica carinata HOM05D005116 ORTHO05D031782 4.2e-09 65.9 179 31.8
HPP92_007017 Vanilla planifolia HOM05D005116 ORTHO05D005937 4.2e-09 65.9 265 26.8
Aa31LG1G8970 Aethionema arabicum HOM05D005116 ORTHO05D005937 1.2e-08 64.3 286 29.0
FAN18G1308 Fragaria x ananassa HOM05D005116 ORTHO05D005937 2.7e-08 63.2 139 41.7
QL08p039613 Quercus lobata HOM05D005116 ORTHO05D005937 3.6e-08 62.8 282 30.1
THA.LOC104801168 Tarenaya hassleriana HOM05D005116 ORTHO05D005937 3.6e-08 62.8 108 38.9
BcaNung07372 Brassica carinata HOM05D005116 ORTHO05D005937 1.4e-07 60.8 239 31.4
BcaC07g36947 Brassica carinata HOM05D005116 ORTHO05D005937 1.8e-07 60.5 81 44.4
Peaxi162Scf01415g00032 Petunia axillaris HOM05D005116 ORTHO05D005937 5.1e-07 58.9 203 29.1
ATR0763G277 Amborella trichopoda HOM05D005116 ORTHO05D005937 1.1e-06 57.8 102 42.2
THA.LOC104826035 Tarenaya hassleriana HOM05D005116 ORTHO05D005937 1.5e-06 57.4 121 38.0
Haze_13200 Corylus avellana HOM05D005116 ORTHO05D005937 2.0e-06 57.0 145 34.5
Medtr4g078505 Medicago truncatula HOM05D005116 ORTHO05D005937 2.6e-06 56.6 231 28.6


User provided reference genes

Program Settings