Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.25002 Avicennia marina HOM05D005719 ORTHO05D007030 1.4e-284 982.2 496 100.0
Migut.C00296 Erythranthe guttata HOM05D005719 ORTHO05D007030 3.2e-196 688.7 495 71.5
Oeu035376.1 Olea europaea HOM05D005719 ORTHO05D007030 4.9e-184 648.3 487 66.9
SGA_v2.0_scaffold14G07072 Striga asiatica HOM05D005719 ORTHO05D007030 1.7e-173 613.2 524 63.5
unitig_749.g13864 Utricularia gibba HOM05D005719 ORTHO05D000442 5.4e-167 591.7 496 61.5
Hma1.2p1_0010F.1_g006360 Hydrangea macrophylla HOM05D005719 ORTHO05D007030 6.6e-165 584.7 498 61.0
Nitab4.5_0001608g0030 Nicotiana tabacum HOM05D005719 ORTHO05D007030 8.9e-162 574.3 494 59.3
Cc10_g08220 Coffea canephora HOM05D005719 ORTHO05D007030 2.6e-161 572.8 496 59.9
CSS0009932 Camellia sinensis var. sinensis HOM05D005719 ORTHO05D007030 4.1e-159 565.5 505 57.8
Actinidia19605 Actinidia chinensis HOM05D005719 ORTHO05D007030 3.0e-157 559.3 498 57.8
vmacro04622 Vaccinium macrocarpon HOM05D005719 ORTHO05D007030 3.1e-154 549.3 502 58.4
Sopen02g003330 Solanum pennellii HOM05D005719 ORTHO05D007030 9.2e-151 537.7 500 55.6
GSVIVG01009231001 Vitis vinifera HOM05D005719 ORTHO05D007030 2.7e-150 536.2 439 61.7
Gorai.009G226700 Gossypium raimondii HOM05D005719 ORTHO05D007030 1.5e-148 530.4 495 55.6
Thecc.08G076500 Theobroma cacao HOM05D005719 ORTHO05D007030 1.9e-148 530.0 491 56.2
Gohir.A05G217800 Gossypium hirsutum HOM05D005719 ORTHO05D007030 2.5e-148 529.6 492 55.7
Sc02g0008400 Simmondsia chinensis HOM05D005719 ORTHO05D007030 4.3e-148 528.9 502 56.0
Duzib093G1837 Durio zibethinus HOM05D005719 ORTHO05D007030 1.2e-147 527.3 492 55.7
Solyc02g014380.3 Solanum lycopersicum HOM05D005719 ORTHO05D007030 4.7e-147 525.4 500 54.4
MD15G1392600 Malus domestica HOM05D005719 ORTHO05D007030 1.1e-146 524.2 508 55.9
TWI56G1147 Tripterygium wilfordii HOM05D005719 ORTHO05D007030 1.8e-146 523.5 494 55.1
Gohir.D05G219700 Gossypium hirsutum HOM05D005719 ORTHO05D007030 4.0e-146 522.3 492 55.3
HanXRQChr03g0065451 Helianthus annuus HOM05D005719 ORTHO05D007030 1.5e-145 520.4 494 55.7
QL12p040011 Quercus lobata HOM05D005719 ORTHO05D007030 1.5e-145 520.4 502 56.2
Sabra02G0085500 Salix brachista HOM05D005719 ORTHO05D007030 2.0e-145 520.0 497 55.7
CAN.G1751.8 Capsicum annuum HOM05D005719 ORTHO05D007030 2.2e-144 516.5 524 51.7
ECA240G4523 Erigeron canadensis HOM05D005719 ORTHO05D007030 6.4e-144 515.0 498 54.6
TAR628G1450 Trochodendron aralioides HOM05D005719 ORTHO05D007030 8.4e-144 514.6 500 54.6
Prupe.1G540100 Prunus persica HOM05D005719 ORTHO05D007030 1.1e-143 514.2 506 55.5
Manes.18G055200 Manihot esculenta HOM05D005719 ORTHO05D007030 3.2e-143 512.7 499 55.9
MD08G1208600 Malus domestica HOM05D005719 ORTHO05D007030 5.4e-143 511.9 505 53.3
Nitab4.5_0000681g0030 Nicotiana tabacum HOM05D005719 ORTHO05D007030 9.3e-143 511.1 498 55.2
Phvul.009G145500 Phaseolus vulgaris HOM05D005719 ORTHO05D007030 1.2e-142 510.8 500 54.4
Haze_22505 Corylus avellana HOM05D005719 ORTHO05D007030 6.0e-142 508.4 524 53.2
EL10Ac1g02246 Beta vulgaris HOM05D005719 ORTHO05D007030 1.3e-141 507.3 502 52.4
CiPaw.08G058000 Carya illinoinensis HOM05D005719 ORTHO05D007030 1.3e-141 507.3 497 54.7
Glyma.06G092200 Glycine max HOM05D005719 ORTHO05D007030 2.3e-141 506.5 499 54.3
arahy.Tifrunner.gnm1.ann1.I1WLRD Arachis hypogaea HOM05D005719 ORTHO05D007030 3.9e-141 505.8 495 54.3
Lalb_Chr11g0064791 Lupinus albus HOM05D005719 ORTHO05D007030 5.1e-141 505.4 497 53.9
arahy.Tifrunner.gnm1.ann1.SLT0HR Arachis hypogaea HOM05D005719 ORTHO05D007030 3.3e-140 502.7 496 54.6
CiPaw.07G161600 Carya illinoinensis HOM05D005719 ORTHO05D007030 4.3e-140 502.3 451 57.9
CANSAT21G2028 Cannabis sativa HOM05D005719 ORTHO05D007030 1.3e-139 500.7 497 52.9
Glyma.04G090400 Glycine max HOM05D005719 ORTHO05D007030 2.8e-139 499.6 495 53.9
Lj1g0010479 Lotus japonicus HOM05D005719 ORTHO05D007030 4.8e-139 498.8 497 53.7
RcHm_v2.0_Chr7g0233191 Rosa chinensis HOM05D005719 ORTHO05D007030 8.1e-139 498.0 512 52.3
Psat5g018640 Pisum sativum HOM05D005719 ORTHO05D007030 5.3e-138 495.4 501 53.9
TAR381G0820 Trochodendron aralioides HOM05D005719 ORTHO05D007030 9.0e-138 494.6 450 56.4
Eucgr.F02170 Eucalyptus grandis HOM05D005719 ORTHO05D007030 1.2e-137 494.2 499 52.3
TPR.G12418 Trifolium pratense HOM05D005719 ORTHO05D007030 3.4e-137 492.7 495 52.9
Lsat_1_v5_gn_7_55820 Lactuca sativa HOM05D005719 ORTHO05D007030 7.6e-137 491.5 506 52.4
Cfa013832 Carpinus fangiana HOM05D000446 ORTHO05D000321 3.8e-136 489.2 470 55.1
Hund05222 Selenicereus undatus HOM05D005719 ORTHO05D007030 1.9e-135 486.9 496 53.8
DCAR_014675 Daucus carota HOM05D005719 ORTHO05D007030 7.1e-135 485.0 487 54.2
CAN.G1921.11 Capsicum annuum HOM05D005719 ORTHO05D007030 2.7e-134 483.0 502 49.8
PGR031G2819 Punica granatum HOM05D005719 ORTHO05D007030 3.5e-134 482.6 489 51.9
Cpa.g.sc177.3 Carica papaya HOM05D005719 ORTHO05D007030 6.0e-134 481.9 421 57.7
Ciclev10000979m.g Citrus clementina HOM05D005719 ORTHO05D007030 1.3e-133 480.7 493 52.1
Medtr3g111330 Medicago truncatula HOM05D005719 ORTHO05D007030 1.1e-132 477.6 506 51.8
FvH4_5g33860 Fragaria vesca HOM05D005719 ORTHO05D007030 4.3e-132 475.7 508 51.4
SalBow7G1913 Salvia bowleyana HOM05D005719 ORTHO05D007030 2.1e-131 473.4 398 62.8
VMungo1309G0989 Vigna mungo HOM05D005719 ORTHO05D007030 2.8e-131 473.0 473 53.7
Dinv44886 Davidia involucrata HOM05D005719 ORTHO05D007030 2.4e-130 469.9 398 61.6
PSO700G0171 Papaver somniferum HOM05D005719 ORTHO05D007030 3.1e-130 469.5 482 49.4
ClCG11G014800 Citrullus lanatus HOM05D005719 ORTHO05D007030 5.3e-130 468.8 496 50.8
THA.LOC104823811 Tarenaya hassleriana HOM05D005719 ORTHO05D007030 2.0e-129 466.8 499 50.9
Sed0009724 Sechium edule HOM05D005719 ORTHO05D007030 2.2e-128 463.4 471 52.4
COL.COLO4_35322 Corchorus olitorius HOM05D005719 ORTHO05D007030 4.9e-128 462.2 492 52.8
Duzib041G0544 Durio zibethinus HOM05D005719 ORTHO05D007030 6.4e-128 461.8 491 51.5
PGSC0003DMG400019103 Solanum tuberosum HOM05D005719 ORTHO05D007030 1.9e-127 460.3 498 50.2
Sp2g17320 Schrenkiella parvula HOM05D005719 ORTHO05D007030 2.4e-127 459.9 495 50.1
PSO761G0268 Papaver somniferum HOM05D005719 ORTHO05D007030 7.1e-127 458.4 502 47.6
Atru.chr13.942 Acer truncatum HOM05D005719 ORTHO05D007030 1.6e-126 457.2 495 51.7
BcaC06g30902 Brassica carinata HOM05D005719 ORTHO05D007030 1.6e-126 457.2 495 50.3
Thhalv10004086m.g Eutrema salsugineum HOM05D005719 ORTHO05D007030 1.8e-125 453.8 500 49.8
THA.LOC104805699 Tarenaya hassleriana HOM05D005719 ORTHO05D007030 1.8e-125 453.8 496 48.2
CARHR286650 Cardamine hirsuta HOM05D005719 ORTHO05D007030 3.0e-125 453.0 500 49.0
CsaV3_3G048210 Cucumis sativus L. HOM05D005719 ORTHO05D007030 3.0e-125 453.0 501 49.5
Carub.0005s0719 Capsella rubella HOM05D005719 ORTHO05D007030 1.5e-124 450.7 495 49.5
TPR.G21947 Trifolium pratense HOM05D005719 ORTHO05D007030 4.3e-124 449.1 468 52.1
AL5G18300 Arabidopsis lyrata HOM05D005719 ORTHO05D007030 6.2e-123 445.3 494 49.2
FAN08G1402 Fragaria x ananassa HOM05D005719 ORTHO05D007030 1.4e-122 444.1 574 44.9
AT3G28670 Arabidopsis thaliana HOM05D005719 ORTHO05D007030 3.2e-119 433.0 498 47.8
Aa31LG2G4530 Aethionema arabicum HOM05D005719 ORTHO05D007030 5.5e-119 432.2 492 48.6
MBI16_g44752_MAGBIO Magnolia biondii HOM05D005719 ORTHO05D007030 5.5e-119 432.2 434 52.5
A06p40410 Brassica napus HOM05D005719 ORTHO05D007030 1.0e-117 427.9 499 48.5
BraA06t26959Z Brassica rapa HOM05D005719 ORTHO05D007030 1.0e-117 427.9 499 48.5
C07p37630 Brassica napus HOM05D005719 ORTHO05D007030 3.0e-117 426.4 498 48.4
Rhsim07G0214600 Rhododendron simsii HOM05D005719 ORTHO05D007030 5.1e-117 425.6 374 59.1
BcaC06g33632 Brassica carinata HOM05D005719 ORTHO05D007030 6.7e-117 425.2 498 48.2
FAN18G0583 Fragaria x ananassa HOM05D005719 ORTHO05D007030 8.7e-117 424.9 437 51.3
Nn1g05685 Nelumbo nucifera HOM05D005719 ORTHO05D007030 4.3e-116 422.5 494 47.2
BolC7t44279H Brassica oleracea HOM05D005719 ORTHO05D007030 7.4e-116 421.8 499 48.3
AUR62035419 Chenopodium quinoa HOM05D005719 ORTHO05D007030 2.8e-115 419.9 550 44.7
Peaxi162Scf01397g00011 Petunia axillaris HOM05D005719 ORTHO05D007030 6.3e-115 418.7 363 58.7
HPP92_028121 Vanilla planifolia HOM05D005719 ORTHO05D007030 1.0e-109 401.4 504 44.6
HPP92_020868 Vanilla planifolia HOM05D005719 ORTHO05D007030 5.1e-109 399.1 503 44.5
Ca_15541_v3 Cicer arietinum L. HOM05D005719 ORTHO05D007030 3.7e-107 392.9 496 47.4
Manes.05G187400 Manihot esculenta HOM05D005719 ORTHO05D007030 4.8e-107 392.5 389 52.4
MELO3C003498.2 Cucumis melo HOM05D005719 ORTHO05D007030 2.4e-98 363.6 345 53.0
PGSC0003DMG400019007 Solanum tuberosum HOM05D005719 ORTHO05D007030 1.5e-97 360.9 500 43.2
Os08g0101400 Oryza sativa ssp. japonica HOM05D005719 ORTHO05D007030 2.6e-97 360.1 496 41.7
CDE07G0720 Ceratophyllum demersum HOM05D005719 ORTHO05D007030 5.0e-96 355.9 496 41.3
Ah.00g000110 Amaranthus hybridus HOM05D005719 ORTHO05D007030 1.9e-95 354.0 399 47.6
Actinidia29649 Actinidia chinensis HOM05D005719 ORTHO05D007030 3.2e-87 326.6 356 48.9
Potri.002G108700 Populus trichocarpa HOM05D005719 ORTHO05D007030 4.0e-85 319.7 254 64.6
Mapoly0053s0027 Marchantia polymorpha HOM05D005719 ORTHO05D007030 2.5e-71 273.9 491 35.6
Pp3c26_6510 Physcomitrium patens HOM05D005719 ORTHO05D007030 4.0e-69 266.5 499 34.7
Os10g0188900 Oryza sativa ssp. japonica HOM05D005719 ORTHO05D007030 2.0e-60 237.7 269 48.3
TAR381G1016 Trochodendron aralioides HOM05D005719 ORTHO05D007030 3.2e-58 230.3 188 61.7
TAR381G0292 Trochodendron aralioides HOM05D005719 ORTHO05D007030 2.8e-54 217.2 238 50.0
Lju279A4T8 Lonicera japonica HOM05D005719 ORTHO05D007030 4.7e-54 216.5 172 63.4
SMO118G0237 Selaginella moellendorffii HOM05D005719 ORTHO05D007030 8.9e-53 212.2 418 35.2
Zm00001eb198670 Zea mays HOM05D005719 ORTHO05D007030 2.6e-52 210.7 275 44.0
AUR62035705 Chenopodium quinoa HOM05D005719 ORTHO05D007030 1.4e-50 204.9 287 40.4
HanXRQChr16g0499811 Helianthus annuus HOM05D005719 ORTHO05D007030 1.3e-48 198.4 352 37.8
AUR62035707 Chenopodium quinoa HOM05D005719 ORTHO05D007030 4.3e-47 193.4 139 66.9
Oeu035375.1 Olea europaea HOM05D005719 ORTHO05D007030 9.9e-44 182.2 168 56.0
Duzib116G0315 Durio zibethinus HOM05D005719 ORTHO05D007030 3.9e-40 170.2 136 59.6
Lju170A15T23 Lonicera japonica HOM05D005719 ORTHO05D007030 1.6e-38 164.9 108 74.1
BcaB04g19478 Brassica carinata HOM05D005719 ORTHO05D007030 2.2e-35 154.5 280 38.2
CBR_g38241 Chara braunii HOM05D005719 ORTHO05D007030 2.4e-34 151.0 376 29.5
ATR0800G070 Amborella trichopoda HOM05D005719 ORTHO05D007030 6.0e-33 146.4 134 57.5
Hund16029 Selenicereus undatus HOM05D005719 ORTHO05D007030 1.3e-32 145.2 248 37.1
ATR0144G003 Amborella trichopoda HOM05D005719 ORTHO05D007030 1.7e-32 144.8 232 37.9
AagrBONN_evm.TU.Sc2ySwM_369.438 Anthoceros agrestis HOM05D005719 ORTHO05D007030 1.6e-30 138.3 337 30.0
SEGI_36882 Sequoiadendron giganteum HOM05D005719 ORTHO05D007030 1.1e-29 135.6 140 51.4
Lju170A15T24 Lonicera japonica HOM05D005719 ORTHO05D007030 2.1e-25 121.3 109 57.8
Peaxi162Scf01397g00010 Petunia axillaris HOM05D005719 ORTHO05D007030 6.6e-24 116.3 131 45.8
COL.COLO4_23153 Corchorus olitorius HOM05D005719 ORTHO05D007030 3.4e-20 104.0 164 40.9
Cre12.g551000 Chlamydomonas reinhardtii HOM05D005719 ORTHO05D007030 2.8e-14 84.3 420 21.9
Lju279C4T1 Lonicera japonica HOM05D005719 ORTHO05D007030 6.4e-11 73.2 109 42.2
SEGI_23985 Sequoiadendron giganteum HOM05D005719 ORTHO05D007030 6.0e-09 66.6 128 30.5
C05p32060 Brassica napus HOM05D005719 ORTHO05D007030 5.6e-07 60.1 91 41.8
BolC5t31933H Brassica oleracea HOM05D005719 ORTHO05D007030 5.6e-07 60.1 91 41.8
Pp3c4_19380 Physcomitrium patens HOM05D005719 ORTHO05D007030 8.2e-06 56.2 114 36.0


User provided reference genes

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