Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.2490 Avicennia marina HOM05D006805 ORTHO05D008656 5.6e-239 830.5 401 100.0
Migut.H02510 Erythranthe guttata HOM05D006805 ORTHO05D008656 1.3e-187 659.8 402 77.9
SGA_v2.0_scaffold51G18803 Striga asiatica HOM05D006805 ORTHO05D008656 1.4e-178 629.8 462 68.0
CSS0042312 Camellia sinensis var. sinensis HOM05D006805 ORTHO05D008656 2.8e-174 615.5 399 72.2
CAN.G358.30 Capsicum annuum HOM05D006805 ORTHO05D008656 3.0e-168 595.5 402 68.9
Solyc02g084810.3 Solanum lycopersicum HOM05D006805 ORTHO05D008656 3.0e-168 595.5 399 69.4
Sopen02g029480 Solanum pennellii HOM05D006805 ORTHO05D008656 6.7e-168 594.3 399 69.2
GSVIVG01018866001 Vitis vinifera HOM05D006805 ORTHO05D008656 6.3e-166 587.8 401 68.8
Rhsim08G0122900 Rhododendron simsii HOM05D006805 ORTHO05D008656 3.8e-163 578.6 401 67.1
Peaxi162Scf00418g00926 Petunia axillaris HOM05D006805 ORTHO05D008656 5.0e-163 578.2 391 69.3
Prupe.7G161800 Prunus persica HOM05D006805 ORTHO05D008656 3.0e-160 568.9 400 65.2
Dinv40030 Davidia involucrata HOM05D006805 ORTHO05D008656 5.2e-160 568.2 429 63.4
QL06p035053 Quercus lobata HOM05D006805 ORTHO05D008656 2.6e-159 565.8 391 67.0
Hma1.2p1_0913F.1_g235930 Hydrangea macrophylla HOM05D006805 ORTHO05D008656 2.2e-158 562.8 399 66.7
Atru.chr3.728 Acer truncatum HOM05D006805 ORTHO05D008656 2.8e-158 562.4 396 66.4
Cc07_g10060 Coffea canephora HOM05D006805 ORTHO05D008656 6.3e-158 561.2 402 67.9
SalBow8G5631 Salvia bowleyana HOM05D006805 ORTHO05D008656 4.1e-157 558.5 435 63.4
TAR381G0553 Trochodendron aralioides HOM05D006805 ORTHO05D008656 5.9e-156 554.7 397 65.2
CANSAT01G1867 Cannabis sativa HOM05D006805 ORTHO05D008656 1.0e-155 553.9 398 66.1
TWI73G0963 Tripterygium wilfordii HOM05D006805 ORTHO05D008656 1.0e-155 553.9 403 64.0
Nn1g05800 Nelumbo nucifera HOM05D006805 ORTHO05D008656 1.3e-155 553.5 397 64.2
FvH4_1g12510 Fragaria vesca HOM05D006805 ORTHO05D008656 1.7e-155 553.1 399 64.2
RcHm_v2.0_Chr2g0100411 Rosa chinensis HOM05D006805 ORTHO05D008656 3.8e-155 552.0 401 63.8
CiPaw.08G138000 Carya illinoinensis HOM05D006805 ORTHO05D008656 1.1e-154 550.4 392 65.3
Potri.007G019400 Populus trichocarpa HOM05D006805 ORTHO05D008656 5.5e-154 548.1 394 65.7
MD15G1252400 Malus domestica HOM05D006805 ORTHO05D008656 1.2e-153 547.0 399 64.7
Cfa006913 Carpinus fangiana HOM05D006805 ORTHO05D008656 1.8e-152 543.1 395 65.1
Phvul.003G257300 Phaseolus vulgaris HOM05D006805 ORTHO05D008656 8.8e-152 540.8 390 62.3
Nitab4.5_0004708g0010 Nicotiana tabacum HOM05D006805 ORTHO05D008656 1.2e-151 540.4 397 64.0
THA.LOC104804245 Tarenaya hassleriana HOM05D006805 ORTHO05D008656 7.5e-151 537.7 397 62.7
FAN19G2522 Fragaria x ananassa HOM05D006805 ORTHO05D008656 9.8e-151 537.3 412 61.7
Manes.01G140000 Manihot esculenta HOM05D006805 ORTHO05D008656 1.3e-150 537.0 394 63.7
VMungo0251G3732 Vigna mungo HOM05D006805 ORTHO05D008656 1.3e-150 537.0 390 63.1
Hund16454 Selenicereus undatus HOM05D006805 ORTHO05D008656 2.2e-150 536.2 393 64.6
PSO731G0058 Papaver somniferum HOM05D006805 ORTHO05D008656 3.7e-150 535.4 400 62.2
COL.COLO4_22005 Corchorus olitorius HOM05D006805 ORTHO05D008656 1.8e-149 533.1 420 61.9
Lalb_Chr16g0391011 Lupinus albus HOM05D006805 ORTHO05D008656 1.8e-149 533.1 402 60.4
Thecc.01G027300 Theobroma cacao HOM05D006805 ORTHO05D008656 1.8e-149 533.1 397 63.5
Eucgr.J02381 Eucalyptus grandis HOM05D006805 ORTHO05D008656 2.4e-149 532.7 396 63.6
Glyma.02G052900 Glycine max HOM05D006805 ORTHO05D008656 3.1e-149 532.3 384 63.5
Aqoxy5G01548 Aquilegia oxysepala HOM05D006805 ORTHO05D008656 3.8e-147 525.4 383 64.0
Sed0012409 Sechium edule HOM05D006805 ORTHO05D008656 2.5e-146 522.7 400 60.8
BolC1t00250H Brassica oleracea HOM05D006805 ORTHO05D008656 5.5e-146 521.5 400 61.2
HanXRQChr14g0441241 Helianthus annuus HOM05D006805 ORTHO05D008656 5.5e-146 521.5 390 62.6
Duzib147G1209 Durio zibethinus HOM05D006805 ORTHO05D008656 9.4e-146 520.8 406 60.3
Thhalv10000178m.g Eutrema salsugineum HOM05D006805 ORTHO05D008656 1.2e-145 520.4 395 61.0
Lj4g0018076 Lotus japonicus HOM05D006805 ORTHO05D008656 1.2e-145 520.4 397 62.0
ECA238G0382 Erigeron canadensis HOM05D006805 ORTHO05D008656 1.6e-145 520.0 389 61.2
C01p02610 Brassica napus HOM05D006805 ORTHO05D008656 2.7e-145 519.2 399 61.2
Thhalv10025347m.g Eutrema salsugineum HOM05D006805 ORTHO05D008656 3.6e-145 518.8 396 60.4
BcaNung00732 Brassica carinata HOM05D006805 ORTHO05D008656 1.0e-144 517.3 399 60.9
Gorai.003G012500 Gossypium raimondii HOM05D006805 ORTHO05D008656 1.0e-144 517.3 399 61.2
PGR102G0609 Punica granatum HOM05D006805 ORTHO05D008656 1.8e-144 516.5 394 62.7
Sp7g34100 Schrenkiella parvula HOM05D006805 ORTHO05D008656 3.0e-144 515.8 395 61.0
Haze_03843 Corylus avellana HOM05D006805 ORTHO05D008656 5.2e-144 515.0 451 57.6
AL7G14650 Arabidopsis lyrata HOM05D006805 ORTHO05D008656 8.8e-144 514.2 390 61.0
Gohir.D03G012200 Gossypium hirsutum HOM05D006805 ORTHO05D008656 8.8e-144 514.2 399 60.7
Psat4g096160 Pisum sativum HOM05D006805 ORTHO05D008656 2.6e-143 512.7 400 59.2
CsaV3_6G046700 Cucumis sativus L. HOM05D006805 ORTHO05D008656 4.4e-143 511.9 403 58.8
Sabra07G0016600 Salix brachista HOM05D006805 ORTHO05D008656 5.7e-143 511.5 412 60.2
Gohir.A02G167800 Gossypium hirsutum HOM05D006805 ORTHO05D008656 7.5e-143 511.1 399 60.2
Medtr8g076840 Medicago truncatula HOM05D006805 ORTHO05D008656 9.8e-143 510.8 384 61.2
Carub.0007s0387 Capsella rubella HOM05D006805 ORTHO05D008656 1.7e-142 510.0 390 60.3
arahy.Tifrunner.gnm1.ann1.P9L48X Arachis hypogaea HOM05D006805 ORTHO05D008656 1.4e-141 506.9 394 60.2
BraA01t00229Z Brassica rapa HOM05D006805 ORTHO05D008656 2.4e-141 506.1 404 59.7
A01p02400 Brassica napus HOM05D000394 ORTHO05D008656 7.0e-141 504.6 411 58.4
DCAR_025973 Daucus carota HOM05D006805 ORTHO05D008656 7.0e-141 504.6 400 60.5
CARHR244770 Cardamine hirsuta HOM05D006805 ORTHO05D008656 1.6e-140 503.4 402 58.0
MELO3C007867.2 Cucumis melo HOM05D006805 ORTHO05D008656 1.6e-140 503.4 430 55.3
Ciclev10025725m.g Citrus clementina HOM05D006805 ORTHO05D008656 3.5e-140 502.3 349 66.5
arahy.Tifrunner.gnm1.ann1.FKKR7E Arachis hypogaea HOM05D006805 ORTHO05D008656 1.3e-139 500.4 368 62.0
Nitab4.5_0000723g0180 Nicotiana tabacum HOM05D006805 ORTHO05D008656 1.1e-138 497.3 391 62.1
AT4G36440 Arabidopsis thaliana HOM05D006805 ORTHO05D008656 1.6e-137 493.4 388 59.8
vmacro17722 Vaccinium macrocarpon HOM05D006805 ORTHO05D008656 1.0e-136 490.7 350 64.9
AUR62007618 Chenopodium quinoa HOM05D006805 ORTHO05D008656 1.7e-134 483.4 374 62.3
FAN23G0481 Fragaria x ananassa HOM05D006805 ORTHO05D008656 1.4e-133 480.3 406 57.6
Duzib264G1030 Durio zibethinus HOM05D006805 ORTHO05D008656 8.6e-131 471.1 408 57.4
HPP92_008328 Vanilla planifolia HOM05D006805 ORTHO05D008656 3.4e-127 459.1 386 57.0
Ca_22341_v3 Cicer arietinum L. HOM05D006805 ORTHO05D008656 1.3e-126 457.2 383 57.2
BcaNung05308 Brassica carinata HOM05D000394 ORTHO05D000299 7.0e-125 451.4 344 58.4
ATR1154G040 Amborella trichopoda HOM05D006805 ORTHO05D008656 1.7e-123 446.8 351 60.7
ClCG01G019940 Citrullus lanatus HOM05D006531 ORTHO05D008656 1.7e-123 446.8 446 50.2
unitig_61.g26353 Utricularia gibba HOM05D006805 ORTHO05D008656 1.9e-122 443.4 402 57.0
Hma1.2p1_0913F.1_g235940 Hydrangea macrophylla HOM05D006805 ORTHO05D008656 2.6e-119 433.0 288 69.1
Hma1.2p1_2955F.1_g330740 Hydrangea macrophylla HOM05D006805 ORTHO05D008656 3.7e-118 429.1 340 61.2
MBI16_g23836_MAGBIO Magnolia biondii HOM05D006805 ORTHO05D008656 1.1e-112 411.0 348 58.0
CDE06G0805 Ceratophyllum demersum HOM05D006805 ORTHO05D008656 6.8e-112 408.3 346 57.2
FAN26G3258 Fragaria x ananassa HOM05D006805 ORTHO05D008656 2.1e-108 396.7 407 51.1
Aa31LG6G13250 Aethionema arabicum HOM05D006805 ORTHO05D008656 2.8e-105 386.3 307 60.3
Lj4C209T2 Lonicera japonica HOM05D006805 ORTHO05D008656 4.3e-98 362.5 254 65.4
AUR62004104 Chenopodium quinoa HOM05D006805 ORTHO05D008656 2.1e-89 333.6 251 62.9
SGA_v2.0_scaffold7G03543 Striga asiatica HOM05D006805 ORTHO05D003527 2.8e-89 333.2 207 77.8
Sc03g0003200 Simmondsia chinensis HOM05D006805 ORTHO05D004508 3.1e-88 329.7 251 62.2
AagrBONN_evm.TU.Sc2ySwM_228.1023 Anthoceros agrestis HOM05D006805 ORTHO05D001783 1.1e-85 321.2 384 41.7
EL10As8g23891 Beta vulgaris HOM05D006805 ORTHO05D008656 7.1e-85 318.5 212 66.0
SMO141G0060 Selaginella moellendorffii HOM05D006805 ORTHO05D008656 1.2e-84 317.8 337 46.3
Mapoly0033s0048 Marchantia polymorpha HOM05D006805 ORTHO05D008656 2.3e-83 313.5 398 41.7
arahy.Tifrunner.gnm1.ann1.CY3TH7 Arachis hypogaea HOM05D006805 ORTHO05D008656 1.4e-80 304.3 424 41.0
Pp3c15_5920 Physcomitrium patens HOM05D006805 ORTHO05D008656 8.4e-78 295.0 371 41.5
Pp3c9_15730 Physcomitrium patens HOM05D006805 ORTHO05D008656 8.4e-78 295.0 398 40.2
Sc03g0003190 Simmondsia chinensis HOM05D006805 ORTHO05D008656 1.6e-73 280.8 228 60.1
Cpa.g.sc6.179 Carica papaya HOM05D006805 ORTHO05D008656 2.6e-71 273.5 390 41.3
TPR.G21535 Trifolium pratense HOM05D006805 ORTHO05D008656 3.4e-63 246.5 170 65.9
Lsat_1_v5_gn_2_78040 Lactuca sativa HOM05D006805 ORTHO05D008656 6.5e-62 242.3 221 53.8
HanXRQChr12g0370271 Helianthus annuus HOM05D006805 ORTHO05D008656 8.2e-57 225.3 213 53.1
AL6G38800 Arabidopsis lyrata HOM05D006805 ORTHO05D008656 1.1e-53 214.9 159 66.0
Zm00001eb128340 Zea mays HOM05D006805 ORTHO05D008656 1.4e-53 214.5 201 50.7
Dinv10224 Davidia involucrata HOM05D006805 ORTHO05D008656 1.0e-46 191.8 137 62.0
HanXRQChr16g0499431 Helianthus annuus HOM05D006805 ORTHO05D008656 1.7e-46 191.0 314 38.9
Glyma.16G133100 Glycine max HOM05D006805 ORTHO05D008656 1.5e-42 177.9 118 62.7
HanXRQChr09g0256121 Helianthus annuus HOM05D006805 ORTHO05D008656 1.4e-40 171.4 294 40.5
TPR.G21539 Trifolium pratense HOM05D000894 ORTHO05D001833 3.1e-40 170.2 128 57.8
Lj2g0002148 Lotus japonicus HOM05D006805 ORTHO05D008656 7.2e-37 159.1 122 59.8
Glyma.10G129950 Glycine max HOM05D006805 ORTHO05D008656 5.0e-30 136.3 107 56.1
EL10Ac7g17413 Beta vulgaris HOM05D006805 ORTHO05D008656 8.8e-27 125.6 90 57.8
MD02G1139100 Malus domestica HOM05D006805 ORTHO05D008656 8.3e-25 119.0 103 52.4
Os01g0262700 Oryza sativa ssp. japonica HOM05D006805 ORTHO05D008656 7.0e-24 115.9 125 46.4
HanXRQChr12g0370281 Helianthus annuus HOM05D006805 ORTHO05D008656 4.6e-15 86.7 87 52.9
Pp3c26_9360 Physcomitrium patens HOM05D006805 ORTHO05D008656 2.0e-10 71.2 108 37.0
RcHm_v2.0_Chr2g0136281 Rosa chinensis HOM05D006805 ORTHO05D008656 1.9e-08 64.7 42 71.4


User provided reference genes

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