Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.2488 Avicennia marina HOM05D006531 ORTHO05D007905 2.8e-57 224.9 106 100.0
Migut.H02514 Erythranthe guttata HOM05D006531 ORTHO05D007905 1.2e-18 96.7 95 56.8
SGA_v2.0_scaffold12G06335 Striga asiatica HOM05D006531 ORTHO05D007905 1.9e-16 89.4 75 58.7
MSTRG.23258 Avicennia marina HOM05D006531 ORTHO05D007905 3.2e-16 88.6 75 60.0
SalBow8G4669 Salvia bowleyana HOM05D006531 ORTHO05D007905 2.1e-15 85.9 75 57.3
Oeu056763.1 Olea europaea HOM05D006531 ORTHO05D007905 3.9e-14 81.6 75 54.7
Cc07_g10020 Coffea canephora HOM05D006531 ORTHO05D007905 6.2e-12 74.3 95 44.2
Actinidia35619 Actinidia chinensis HOM05D006531 ORTHO05D007905 8.1e-12 73.9 75 53.3
TAR628G0973 Trochodendron aralioides HOM05D006531 ORTHO05D007905 1.1e-11 73.6 78 53.8
GSVIVG01018883001 Vitis vinifera HOM05D006531 ORTHO05D007905 2.3e-11 72.4 75 50.7
Lj2C458T7 Lonicera japonica HOM05D006531 ORTHO05D007905 5.2e-11 71.2 75 50.7
Atru.chr3.665 Acer truncatum HOM05D006531 ORTHO05D007905 6.8e-11 70.9 75 46.7
unitig_0.g471 Utricularia gibba HOM05D006531 ORTHO05D007905 6.8e-11 70.9 75 50.7
EL10As8g23896 Beta vulgaris HOM05D006531 ORTHO05D007905 8.9e-11 70.5 76 52.6
Hma1.2p1_3019F.1_g331750 Hydrangea macrophylla HOM05D006531 ORTHO05D007905 8.9e-11 70.5 75 52.0
CANSAT21G1927 Cannabis sativa HOM05D006531 ORTHO05D007905 2.0e-10 69.3 75 45.3
Atru.BG.101.p Acer truncatum HOM05D006531 ORTHO05D007905 2.6e-10 68.9 74 45.9
Dinv05610 Davidia involucrata HOM05D006531 ORTHO05D007905 2.6e-10 68.9 75 50.7
Ciclev10025250m.g Citrus clementina HOM05D006531 ORTHO05D007905 4.4e-10 68.2 75 49.3
Rhsim08G0121800 Rhododendron simsii HOM05D006531 ORTHO05D007905 4.4e-10 68.2 75 48.0
Sc07g0000880 Simmondsia chinensis HOM05D006531 ORTHO05D007905 7.6e-10 67.4 89 41.6
CiPaw.07G051400 Carya illinoinensis HOM05D006531 ORTHO05D007905 9.9e-10 67.0 75 50.7
Manes.02G098000 Manihot esculenta HOM05D006531 ORTHO05D007905 1.3e-09 66.6 77 44.2
Nitab4.5_0001289g0010 Nicotiana tabacum HOM05D006531 ORTHO05D007905 1.3e-09 66.6 75 46.7
Solyc03g033720.4 Solanum lycopersicum HOM05D006531 ORTHO05D007905 2.9e-09 65.5 75 48.0
Sopen03g006510 Solanum pennellii HOM05D006531 ORTHO05D007905 4.9e-09 64.7 75 48.0
PGSC0003DMG400022568 Solanum tuberosum HOM05D006531 ORTHO05D007905 4.9e-09 64.7 75 48.0
Lalb_Chr16g0391021 Lupinus albus HOM05D006531 ORTHO05D007905 6.4e-09 64.3 75 48.0
QL06p035210 Quercus lobata HOM05D006531 ORTHO05D007905 6.4e-09 64.3 75 45.3
CAN.G753.1 Capsicum annuum HOM05D006531 ORTHO05D007905 8.4e-09 63.9 75 46.7
vmacro17801 Vaccinium macrocarpon HOM05D006531 ORTHO05D007905 8.4e-09 63.9 75 46.7
VMungo0251G0240 Vigna mungo HOM05D006531 ORTHO05D007905 1.1e-08 63.5 75 45.3
Lsat_1_v5_gn_4_151921 Lactuca sativa HOM05D006531 ORTHO05D007905 1.4e-08 63.2 79 48.1
Sabra07G0016900 Salix brachista HOM05D006531 ORTHO05D007905 1.4e-08 63.2 77 42.9
AUR62007614 Chenopodium quinoa HOM05D006531 ORTHO05D007905 1.9e-08 62.8 75 46.7
TPR.G21544 Trifolium pratense HOM05D006531 ORTHO05D007905 1.9e-08 62.8 75 46.7
Nitab4.5_0011360g0010 Nicotiana tabacum HOM05D006531 ORTHO05D007905 4.1e-08 61.6 75 45.3
Psat4g096120 Pisum sativum HOM05D006531 ORTHO05D007905 4.1e-08 61.6 75 44.0
AUR62004101 Chenopodium quinoa HOM05D006531 ORTHO05D007905 5.4e-08 61.2 75 46.7
Medtr8g076860 Medicago truncatula HOM05D006531 ORTHO05D007905 5.4e-08 61.2 75 45.3
Hund14004 Selenicereus undatus HOM05D006531 ORTHO05D007905 7.1e-08 60.8 75 46.7
TWI53G1729 Tripterygium wilfordii HOM05D006531 ORTHO05D007905 9.2e-08 60.5 75 46.7
Haze_03846 Corylus avellana HOM05D006531 ORTHO05D007905 1.6e-07 59.7 75 45.3
Ah.03g141200 Amaranthus hybridus HOM05D006531 ORTHO05D007905 2.7e-07 58.9 77 44.2
Ca_22340_v3 Cicer arietinum L. HOM05D006531 ORTHO05D007905 2.7e-07 58.9 75 44.0
DCAR_001553 Daucus carota HOM05D006531 ORTHO05D007905 2.7e-07 58.9 64 46.9
Lj4g0004916 Lotus japonicus HOM05D006531 ORTHO05D007905 2.7e-07 58.9 75 44.0
PGR102G2490 Punica granatum HOM05D006531 ORTHO05D007905 2.7e-07 58.9 75 44.0
Phvul.003G257232 Phaseolus vulgaris HOM05D006531 ORTHO05D007905 4.6e-07 58.2 75 42.7
CSS0007477 Camellia sinensis var. sinensis HOM05D006531 ORTHO05D007905 6.0e-07 57.8 62 48.4
Potri.007G019733 Populus trichocarpa HOM05D006531 ORTHO05D007905 6.0e-07 57.8 77 40.3
Potri.007G019800 Populus trichocarpa HOM05D006531 ORTHO05D007905 6.0e-07 57.8 77 40.3
Gohir.D11G188400 Gossypium hirsutum HOM05D006531 ORTHO05D007905 7.8e-07 57.4 75 42.7
Eucgr.J02379 Eucalyptus grandis HOM05D006531 ORTHO05D007905 1.0e-06 57.0 75 38.7
Peaxi162Scf00010g00816 Petunia axillaris HOM05D006531 ORTHO05D007905 1.0e-06 57.0 75 44.0
ECA232G0312 Erigeron canadensis HOM05D006531 ORTHO05D007905 1.3e-06 56.6 76 44.7
Glyma.02G053000 Glycine max HOM05D006531 ORTHO05D007905 1.3e-06 56.6 75 42.7
Gohir.A11G181766 Gossypium hirsutum HOM05D006531 ORTHO05D007905 1.3e-06 56.6 75 41.3
Gohir.D11G322533 Gossypium hirsutum HOM05D006531 ORTHO05D007905 1.3e-06 56.6 75 41.3
Gorai.007G200500 Gossypium raimondii HOM05D006531 ORTHO05D007905 3.9e-06 55.1 75 41.3
arahy.Tifrunner.gnm1.ann1.P54VLQ Arachis hypogaea HOM05D006531 ORTHO05D007905 6.6e-06 54.3 78 42.3
COL.COLO4_22012 Corchorus olitorius HOM05D006531 ORTHO05D007905 8.6e-06 53.9 75 42.7


User provided reference genes

Program Settings