Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.24817 Avicennia marina HOM05D006322 ORTHO05D007716 1.0e-128 463.4 225 100.0
Migut.N00046 Erythranthe guttata HOM05D006322 ORTHO05D007716 3.0e-101 372.1 222 76.6
SGA_v2.0_scaffold119G32659 Striga asiatica HOM05D006322 ORTHO05D007716 8.6e-96 354.0 214 75.2
Oeu019970.1 Olea europaea HOM05D006322 ORTHO05D007716 9.5e-95 350.5 220 72.3
QL06p011774 Quercus lobata HOM05D006322 ORTHO05D007716 2.0e-92 342.8 221 70.6
Peaxi162Scf00244g00413 Petunia axillaris HOM05D006322 ORTHO05D007716 4.4e-92 341.7 217 71.9
PGSC0003DMG400027315 Solanum tuberosum HOM05D006322 ORTHO05D007716 5.8e-92 341.3 214 71.0
Solyc11g007570.2 Solanum lycopersicum HOM05D006322 ORTHO05D007716 7.5e-92 340.9 223 69.1
COL.COLO4_34636 Corchorus olitorius HOM05D006322 ORTHO05D007716 9.8e-92 340.5 222 69.8
Sopen11g003410 Solanum pennellii HOM05D006322 ORTHO05D007716 1.3e-91 340.1 223 69.1
Atru.chr4.3025 Acer truncatum HOM05D006322 ORTHO05D007716 2.9e-91 339.0 222 70.7
Nitab4.5_0001807g0060 Nicotiana tabacum HOM05D006322 ORTHO05D007716 3.7e-91 338.6 214 70.6
Nitab4.5_0002259g0050 Nicotiana tabacum HOM05D006322 ORTHO05D007716 3.7e-91 338.6 214 71.0
SalBow5G5236 Salvia bowleyana HOM05D006322 ORTHO05D007716 3.7e-91 338.6 217 70.0
Haze_01283 Corylus avellana HOM05D006322 ORTHO05D007716 4.9e-91 338.2 221 70.1
Thecc.04G298700 Theobroma cacao HOM05D006322 ORTHO05D007716 1.4e-90 336.7 222 71.2
Cfa015332 Carpinus fangiana HOM05D006322 ORTHO05D007716 1.9e-90 336.3 221 70.1
Glyma.17G032700 Glycine max HOM05D006322 ORTHO05D007716 2.4e-90 335.9 223 69.5
Medtr4g121940 Medicago truncatula HOM05D006322 ORTHO05D007716 2.4e-90 335.9 223 69.1
arahy.Tifrunner.gnm1.ann1.WPA2XH Arachis hypogaea HOM05D006322 ORTHO05D007716 4.1e-90 335.1 223 68.2
VMungo1215G3118 Vigna mungo HOM05D006322 ORTHO05D007716 9.2e-90 334.0 224 67.9
Phvul.003G113400 Phaseolus vulgaris HOM05D006322 ORTHO05D007716 1.2e-89 333.6 223 66.8
arahy.Tifrunner.gnm1.ann1.57P81C Arachis hypogaea HOM05D006322 ORTHO05D007716 4.6e-89 331.6 223 67.3
CANSAT78G1173 Cannabis sativa HOM05D006322 ORTHO05D007716 3.0e-88 328.9 218 69.7
Lalb_Chr13g0298441 Lupinus albus HOM05D006322 ORTHO05D007716 3.0e-88 328.9 220 66.8
Duzib052G0456 Durio zibethinus HOM05D006322 ORTHO05D007716 3.9e-88 328.6 218 70.2
Hma1.2p1_0078F.1_g040000 Hydrangea macrophylla HOM05D006322 ORTHO05D007716 1.5e-87 326.6 216 71.8
TWI09G0431 Tripterygium wilfordii HOM05D006322 ORTHO05D007716 1.5e-87 326.6 220 69.5
TAR636G2967 Trochodendron aralioides HOM05D006322 ORTHO05D007716 1.5e-87 326.6 222 68.9
Manes.03G203000 Manihot esculenta HOM05D006322 ORTHO05D007716 3.3e-87 325.5 224 67.4
Lju470A16T21 Lonicera japonica HOM05D006322 ORTHO05D007716 4.3e-87 325.1 210 72.4
Cc03_g00960 Coffea canephora HOM05D006322 ORTHO05D007716 7.3e-87 324.3 221 67.9
FAN07G2163 Fragaria x ananassa HOM05D006322 ORTHO05D007716 7.3e-87 324.3 218 67.9
Gohir.D09G235800 Gossypium hirsutum HOM05D006322 ORTHO05D007716 7.3e-87 324.3 216 68.5
PGR031G3552 Punica granatum HOM05D006322 ORTHO05D007716 9.5e-87 323.9 218 67.0
Ciclev10005751m.g Citrus clementina HOM05D006322 ORTHO05D007716 1.6e-86 323.2 231 67.1
Actinidia40367 Actinidia chinensis HOM05D006322 ORTHO05D007716 2.8e-86 322.4 212 68.4
Gohir.A09G235000 Gossypium hirsutum HOM05D006322 ORTHO05D007716 2.8e-86 322.4 218 67.4
Eucgr.A00353 Eucalyptus grandis HOM05D006322 ORTHO05D007716 4.7e-86 321.6 213 69.5
Gorai.006G258900 Gossypium raimondii HOM05D006322 ORTHO05D007716 6.2e-86 321.2 216 67.6
CSS0012053 Camellia sinensis var. sinensis HOM05D006322 ORTHO05D007716 8.1e-86 320.9 219 68.9
CiPaw.01G139400 Carya illinoinensis HOM05D006322 ORTHO05D007716 1.4e-85 320.1 213 68.1
Dinv44297 Davidia involucrata HOM05D006322 ORTHO05D007716 1.4e-85 320.1 184 77.7
Lj4g0019910 Lotus japonicus HOM05D006322 ORTHO05D007716 1.4e-85 320.1 223 66.8
Duzib151G0960 Durio zibethinus HOM05D006322 ORTHO05D007716 2.3e-85 319.3 219 67.6
MD16G1155500 Malus domestica HOM05D006322 ORTHO05D007716 2.6e-84 315.8 226 63.7
HanXRQChr13g0395571 Helianthus annuus HOM05D006322 ORTHO05D007716 3.4e-84 315.5 221 64.7
ECA233G0552 Erigeron canadensis HOM05D006322 ORTHO05D007716 5.8e-84 314.7 215 65.6
Aqoxy2G02768 Aquilegia oxysepala HOM05D006322 ORTHO05D007716 1.3e-83 313.5 215 68.8
GSVIVG01035010001 Vitis vinifera HOM05D006322 ORTHO05D007716 2.9e-83 312.4 203 70.9
Nn3g21692 Nelumbo nucifera HOM05D006322 ORTHO05D007716 8.3e-83 310.8 221 66.1
Psat4g024280 Pisum sativum HOM05D006322 ORTHO05D007716 3.2e-82 308.9 220 65.9
RcHm_v2.0_Chr4g0424801 Rosa chinensis HOM05D006322 ORTHO05D007716 3.2e-82 308.9 215 65.6
Prupe.1G119400 Prunus persica HOM05D006322 ORTHO05D007716 4.1e-82 308.5 225 62.2
Ca_21447_v3 Cicer arietinum L. HOM05D006322 ORTHO05D007716 7.1e-82 307.8 224 65.2
Psat4g024200 Pisum sativum HOM05D006322 ORTHO05D007716 1.2e-81 307.0 223 64.1
EL10Ac3g05469 Beta vulgaris HOM05D006322 ORTHO05D007716 1.0e-80 303.9 221 64.7
Cpa.g.sc9.74 Carica papaya HOM05D006322 ORTHO05D007716 3.9e-80 302.0 219 63.5
Hund11963 Selenicereus undatus HOM05D006322 ORTHO05D007716 3.9e-80 302.0 212 63.7
Rhsim04G0234900 Rhododendron simsii HOM05D006322 ORTHO05D007716 9.5e-79 297.4 209 64.6
Thhalv10021446m.g Eutrema salsugineum HOM05D006322 ORTHO05D007716 1.2e-78 297.0 222 60.8
Lsat_1_v5_gn_6_16821 Lactuca sativa HOM05D006322 ORTHO05D007716 1.2e-78 297.0 222 63.1
Sc25g0003310 Simmondsia chinensis HOM05D006322 ORTHO05D007716 1.2e-78 297.0 215 63.7
Carub.0003s1674 Capsella rubella HOM05D006322 ORTHO05D007716 2.1e-78 296.2 219 62.6
Potri.008G106600 Populus trichocarpa HOM05D006322 ORTHO05D007716 2.1e-78 296.2 222 61.3
vmacro08057 Vaccinium macrocarpon HOM05D006322 ORTHO05D007716 2.1e-78 296.2 219 61.2
Aa31LG8G4030 Aethionema arabicum HOM05D006322 ORTHO05D007716 1.1e-77 293.9 220 61.8
CARHR092240 Cardamine hirsuta HOM05D006322 ORTHO05D007716 1.1e-77 293.9 222 61.3
BraA03t13148Z Brassica rapa HOM05D006322 ORTHO05D007716 1.8e-77 293.1 222 61.3
Sabra08G0080400 Salix brachista HOM05D006322 ORTHO05D007716 2.3e-77 292.7 220 60.0
A03p40000 Brassica napus HOM05D006322 ORTHO05D007716 8.9e-77 290.8 222 60.8
AL3G29970 Arabidopsis lyrata HOM05D006322 ORTHO05D007716 2.6e-76 289.3 219 60.7
C03p48530 Brassica napus HOM05D006322 ORTHO05D007716 7.6e-76 287.7 222 59.9
DCAR_027007 Daucus carota HOM05D006322 ORTHO05D007716 7.6e-76 287.7 276 51.8
MBI19_g07237_MAGBIO Magnolia biondii HOM05D006322 ORTHO05D007716 7.6e-76 287.7 211 64.0
BcaB04g18916 Brassica carinata HOM05D006322 ORTHO05D007716 9.9e-76 287.3 222 59.9
BcaC01g03797 Brassica carinata HOM05D006322 ORTHO05D007716 9.9e-76 287.3 222 59.9
BolC3t17131H Brassica oleracea HOM05D006322 ORTHO05D007716 9.9e-76 287.3 222 59.9
PSO357G0527 Papaver somniferum HOM05D006322 ORTHO05D007716 9.9e-76 287.3 215 62.3
FAN12G2263 Fragaria x ananassa HOM05D006322 ORTHO05D007716 1.3e-75 287.0 198 67.2
CsaV3_6G022370 Cucumis sativus L. HOM05D006322 ORTHO05D007716 3.7e-75 285.4 214 60.7
AT3G16990 Arabidopsis thaliana HOM05D006322 ORTHO05D007716 1.4e-74 283.5 219 59.4
PSO170G6693 Papaver somniferum HOM05D006322 ORTHO05D007716 2.4e-74 282.7 214 62.1
Sp3g15210 Schrenkiella parvula HOM05D006322 ORTHO05D007716 3.5e-73 278.9 214 59.3
MELO3C021273.2 Cucumis melo HOM05D006322 ORTHO05D007716 4.6e-73 278.5 210 61.9
CAN.G135.71 Capsicum annuum HOM05D006322 ORTHO05D007716 6.0e-73 278.1 175 71.4
HPP92_001241 Vanilla planifolia HOM05D006322 ORTHO05D007716 2.3e-72 276.2 214 60.7
DCAR_030477 Daucus carota HOM05D006322 ORTHO05D007716 1.6e-70 270.0 217 58.1
Sed0017771 Sechium edule HOM05D006322 ORTHO05D007716 6.2e-70 268.1 210 58.6
ClCG06G004620 Citrullus lanatus HOM05D006322 ORTHO05D007716 2.4e-69 266.2 210 57.1
Peaxi162Scf00244g00510 Petunia axillaris HOM05D006322 ORTHO05D007716 2.6e-68 262.7 216 56.9
BcaB04g18918 Brassica carinata HOM05D006322 ORTHO05D007716 4.4e-68 261.9 222 56.3
ATR0796G257 Amborella trichopoda HOM05D006322 ORTHO05D007716 9.9e-68 260.8 220 53.6
Os03g0306900 Oryza sativa ssp. japonica HOM05D006322 ORTHO05D007716 4.9e-67 258.5 211 56.4
Zm00001eb396140 Zea mays HOM05D006322 ORTHO05D007716 9.3e-66 254.2 213 55.4
FvH4_4g19550 Fragaria vesca HOM05D006322 ORTHO05D007716 1.0e-64 250.8 181 65.2
SEGI_24166 Sequoiadendron giganteum HOM05D006322 ORTHO05D007716 3.3e-63 245.7 218 55.0
Solyc11g007560.2 Solanum lycopersicum HOM05D006322 ORTHO05D007716 1.6e-62 243.4 212 52.8
CAN.G135.72 Capsicum annuum HOM05D006322 ORTHO05D007716 8.1e-62 241.1 213 51.6
AUR62041396 Chenopodium quinoa HOM05D006322 ORTHO05D007716 8.1e-62 241.1 175 64.6
SHI00180 Sapria himalayana HOM05D006322 ORTHO05D007716 1.2e-60 237.3 252 45.6
AUR62016124 Chenopodium quinoa HOM05D006322 ORTHO05D007716 3.4e-60 235.7 174 63.8
Actinidia27045 Actinidia chinensis HOM05D006322 ORTHO05D007716 1.9e-58 229.9 154 68.2
Ah.13g071980 Amaranthus hybridus HOM05D006322 ORTHO05D007716 4.2e-58 228.8 213 53.5
THA.LOC104802603 Tarenaya hassleriana HOM05D006322 ORTHO05D007716 2.1e-57 226.5 175 56.6
Mapoly0003s0261 Marchantia polymorpha HOM05D006322 ORTHO05D007716 6.6e-56 221.5 218 47.2
TAR362G0340 Trochodendron aralioides HOM05D006322 ORTHO05D007716 1.1e-55 220.7 217 52.1
Nitab4.5_0001807g0070 Nicotiana tabacum HOM05D006322 ORTHO05D007716 1.9e-55 219.9 209 49.8
TPR.G20694 Trifolium pratense HOM05D006322 ORTHO05D007716 2.1e-54 216.5 159 62.9
SMO116G0484 Selaginella moellendorffii HOM05D006322 ORTHO05D007716 9.9e-52 207.6 210 46.2
AagrBONN_evm.TU.Sc2ySwM_117.1930 Anthoceros agrestis HOM05D006322 ORTHO05D007716 2.1e-49 199.9 213 46.9
EL10Ac7g16563 Beta vulgaris HOM05D006322 ORTHO05D007716 6.7e-48 194.9 157 59.2
Pp3c10_15580 Physcomitrium patens HOM05D006322 ORTHO05D007716 3.3e-47 192.6 217 45.2
Lalb_Chr20g0120881 Lupinus albus HOM05D006322 ORTHO05D007716 8.1e-46 188.0 141 61.7
BcaB04g18915 Brassica carinata HOM05D001503 ORTHO05D003820 1.5e-44 183.7 166 54.2
PGSC0003DMG400040588 Solanum tuberosum HOM05D006322 ORTHO05D007716 7.6e-44 181.4 161 53.4
Actinidia15599 Actinidia chinensis HOM05D006322 ORTHO05D007716 5.5e-42 175.3 113 69.9
Glyma.07G240701 Glycine max HOM05D006322 ORTHO05D007716 2.2e-30 136.7 131 51.1
CBR_g45493 Chara braunii HOM05D006322 ORTHO05D007716 1.2e-28 131.0 223 30.5
Atru.chr4.3023 Acer truncatum HOM05D006322 ORTHO05D007716 2.0e-28 130.2 80 73.8
EL10Ac9g22265 Beta vulgaris HOM05D006322 ORTHO05D007716 9.1e-21 104.8 127 42.5
Cre09.g407600 Chlamydomonas reinhardtii HOM05D006322 ORTHO05D007716 1.2e-20 104.4 221 31.7
CANSAT54G0480 Cannabis sativa HOM05D006322 ORTHO05D007716 1.5e-15 87.4 83 53.0
EL10Ac1g02106 Beta vulgaris HOM05D006322 ORTHO05D007716 1.2e-12 77.8 56 62.5
BcaB04g18920 Brassica carinata HOM05D006322 ORTHO05D007716 4.5e-12 75.9 79 48.1
Atru.chr4.2979 Acer truncatum HOM05D006322 ORTHO05D007716 5.0e-11 72.4 61 54.1
Lalb_Chr20g0120891 Lupinus albus HOM05D006322 ORTHO05D007716 1.5e-07 60.8 45 53.3


User provided reference genes

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