Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.24738 Avicennia marina HOM05D007425 ORTHO05D009334 1.0e-94 350.1 186 100.0
Oeu031224.1 Olea europaea HOM05D007425 ORTHO05D009334 8.8e-38 161.0 178 55.6
Oeu031227.1 Olea europaea HOM05D007425 ORTHO05D009334 8.8e-38 161.0 178 55.6
Oeu031228.1 Olea europaea HOM05D007425 ORTHO05D009334 8.8e-38 161.0 178 55.6
SalBow3G4464 Salvia bowleyana HOM05D007425 ORTHO05D009334 4.8e-36 155.2 175 54.9
SGA_v2.0_scaffold39G15229 Striga asiatica HOM05D007425 ORTHO05D009334 1.8e-35 153.3 175 56.0
Migut.G00341 Erythranthe guttata HOM05D007425 ORTHO05D009334 2.4e-35 152.9 181 55.8
RcHm_v2.0_Chr7g0190521 Rosa chinensis HOM05D007425 ORTHO05D009334 2.7e-31 139.4 182 52.2
Duzib212G0056 Durio zibethinus HOM05D007425 ORTHO05D009334 1.2e-29 134.0 112 65.2
Duzib151G0901 Durio zibethinus HOM05D007425 ORTHO05D009334 2.0e-29 133.3 185 48.1
PGR142G3696 Punica granatum HOM05D007425 ORTHO05D009334 1.3e-28 130.6 117 63.2
PGSC0003DMG400032277 Solanum tuberosum HOM05D007425 ORTHO05D009334 1.3e-28 130.6 85 77.6
Thecc.04G232500 Theobroma cacao HOM05D007425 ORTHO05D009334 1.3e-28 130.6 175 48.6
Eucgr.L01274 Eucalyptus grandis HOM05D007425 ORTHO05D009334 2.2e-28 129.8 182 48.4
MD13G1193800 Malus domestica HOM05D007425 ORTHO05D009334 2.2e-28 129.8 183 48.1
MELO3C006532.2 Cucumis melo HOM05D007425 ORTHO05D009334 4.8e-28 128.6 181 48.1
Lj3P734T17 Lonicera japonica HOM05D007425 ORTHO05D009334 1.1e-27 127.5 183 47.5
Rhsim04G0201800 Rhododendron simsii HOM05D007425 ORTHO05D009334 1.1e-27 127.5 174 48.3
FAN13G1551 Fragaria x ananassa HOM05D007425 ORTHO05D009334 1.4e-27 127.1 162 49.4
Sabra08G0117000 Salix brachista HOM05D007425 ORTHO05D009334 1.4e-27 127.1 185 47.0
Sopen09g030940 Solanum pennellii HOM05D007425 ORTHO05D009334 1.4e-27 127.1 185 49.2
Ah.14g089400 Amaranthus hybridus HOM05D007425 ORTHO05D009334 1.8e-27 126.7 134 57.5
Eucgr.L02493 Eucalyptus grandis HOM05D007425 ORTHO05D009334 1.8e-27 126.7 118 63.6
Sed0025719 Sechium edule HOM05D007425 ORTHO05D009334 1.8e-27 126.7 126 60.3
Cpa.g.sc9.287 Carica papaya HOM05D007425 ORTHO05D009334 2.4e-27 126.3 115 61.7
Cc03_g03840 Coffea canephora HOM05D007425 ORTHO05D009334 2.4e-27 126.3 187 48.7
Potri.008G153400 Populus trichocarpa HOM05D007425 ORTHO05D009334 3.1e-27 125.9 184 46.7
CANSAT78G0262 Cannabis sativa HOM05D007425 ORTHO05D009334 4.1e-27 125.6 99 69.7
Atru.chr4.2458 Acer truncatum HOM05D007425 ORTHO05D009334 5.4e-27 125.2 116 61.2
Gorai.006G239600 Gossypium raimondii HOM05D007425 ORTHO05D009334 5.4e-27 125.2 182 45.6
CSS0011351 Camellia sinensis var. sinensis HOM05D007425 ORTHO05D009334 7.0e-27 124.8 118 61.9
Gohir.A09G216200 Gossypium hirsutum HOM05D007425 ORTHO05D009334 9.1e-27 124.4 114 61.4
Nitab4.5_0004258g0010 Nicotiana tabacum HOM05D007425 ORTHO05D009334 9.1e-27 124.4 182 51.1
Eucgr.B01085 Eucalyptus grandis HOM05D007425 ORTHO05D009334 1.2e-26 124.0 134 56.0
Prupe.1G014400 Prunus persica HOM05D007425 ORTHO05D009334 1.2e-26 124.0 117 60.7
CsaV3_3G013300 Cucumis sativus L. HOM05D007425 ORTHO05D009334 1.6e-26 123.6 181 47.5
HanXRQChr08g0229221 Helianthus annuus HOM05D007425 ORTHO05D009334 1.6e-26 123.6 88 73.9
unitig_32.g10818 Utricularia gibba HOM05D007425 ORTHO05D009334 1.6e-26 123.6 112 65.2
Gohir.D09G218600 Gossypium hirsutum HOM05D007425 ORTHO05D009334 2.7e-26 122.9 114 61.4
Hma1.2p1_0275F.1_g110893 Hydrangea macrophylla HOM05D007425 ORTHO05D009334 3.5e-26 122.5 126 62.7
Hma1.2p1_0275F.1_g110900 Hydrangea macrophylla HOM05D007425 ORTHO05D009334 3.5e-26 122.5 126 62.7
MD16G1194500 Malus domestica HOM05D007425 ORTHO05D009334 3.5e-26 122.5 156 53.2
Manes.03G178200 Manihot esculenta HOM05D007425 ORTHO05D009334 3.5e-26 122.5 112 63.4
BcaNung00324 Brassica carinata HOM05D007425 ORTHO05D009334 4.5e-26 122.1 119 59.7
Cfa015652 Carpinus fangiana HOM05D007425 ORTHO05D009334 4.5e-26 122.1 113 63.7
Haze_00892 Corylus avellana HOM05D007425 ORTHO05D009334 5.9e-26 121.7 113 64.6
BcaC09g50166 Brassica carinata HOM05D007425 ORTHO05D009334 7.7e-26 121.3 138 55.8
C01p28260 Brassica napus HOM05D007425 ORTHO05D009334 7.7e-26 121.3 138 55.8
BolC1t02755H Brassica oleracea HOM05D007425 ORTHO05D009334 7.7e-26 121.3 138 55.8
BraA01t02180Z Brassica rapa HOM05D007425 ORTHO05D009334 7.7e-26 121.3 125 59.2
COL.COLO4_21483 Corchorus olitorius HOM05D007425 ORTHO05D009334 1.0e-25 120.9 126 58.7
Sc13g0004450 Simmondsia chinensis HOM05D007425 ORTHO05D009334 1.0e-25 120.9 166 48.8
THA.LOC104822268 Tarenaya hassleriana HOM05D007425 ORTHO05D009334 1.3e-25 120.6 155 50.3
CiPaw.01G166700 Carya illinoinensis HOM05D007425 ORTHO05D009334 1.7e-25 120.2 186 47.3
Lsat_1_v5_gn_9_18440 Lactuca sativa HOM05D007425 ORTHO05D009334 1.7e-25 120.2 101 65.3
Nn4g26476 Nelumbo nucifera HOM05D007425 ORTHO05D009334 1.7e-25 120.2 96 66.7
VMungo1215G1239 Vigna mungo HOM05D007425 ORTHO05D009334 1.7e-25 120.2 119 61.3
QL06p002223 Quercus lobata HOM05D007425 ORTHO05D009334 2.3e-25 119.8 137 54.7
THA.LOC104803027 Tarenaya hassleriana HOM05D007425 ORTHO05D009334 2.3e-25 119.8 124 58.9
Sed0000110 Sechium edule HOM05D007425 ORTHO05D009334 2.9e-25 119.4 107 62.6
AL7G40980 Arabidopsis lyrata HOM05D007425 ORTHO05D009334 8.6e-25 117.9 114 61.4
EL10Ac3g06446 Beta vulgaris HOM05D007425 ORTHO05D009334 8.6e-25 117.9 144 54.9
CARHR221470 Cardamine hirsuta HOM05D007425 ORTHO05D009334 8.6e-25 117.9 126 58.7
FAN04G2988 Fragaria x ananassa HOM05D007425 ORTHO05D009334 8.6e-25 117.9 159 48.4
Sp7g13010 Schrenkiella parvula HOM05D007425 ORTHO05D009334 8.6e-25 117.9 120 60.0
Aa31LG9G2430 Aethionema arabicum HOM05D007425 ORTHO05D009334 1.1e-24 117.5 133 55.6
Carub.0007s2724 Capsella rubella HOM05D007425 ORTHO05D009334 1.1e-24 117.5 94 69.1
TAR636G0682 Trochodendron aralioides HOM05D007425 ORTHO05D009334 1.1e-24 117.5 114 60.5
Dinv13997 Davidia involucrata HOM05D001000 ORTHO05D002976 1.5e-24 117.1 115 60.0
Thhalv10026366m.g Eutrema salsugineum HOM05D007425 ORTHO05D009334 1.5e-24 117.1 96 65.6
CAN.G490.15 Capsicum annuum HOM05D007425 ORTHO05D009334 1.9e-24 116.7 74 79.7
AT4G14870 Arabidopsis thaliana HOM05D007425 ORTHO05D009334 4.2e-24 115.5 91 68.1
AUR62033636 Chenopodium quinoa HOM05D007425 ORTHO05D009334 4.2e-24 115.5 120 55.0
DCAR_002385 Daucus carota HOM05D007425 ORTHO05D009334 5.5e-24 115.2 175 43.4
Phvul.002G045100 Phaseolus vulgaris HOM05D007425 ORTHO05D009334 9.5e-24 114.4 95 67.4
ECA247G1832 Erigeron canadensis HOM05D007425 ORTHO05D009334 2.1e-23 113.2 93 65.6
Glyma.01G237800 Glycine max HOM05D007425 ORTHO05D009334 2.1e-23 113.2 144 52.8
FvH4_5g07900 Fragaria vesca HOM05D007425 ORTHO05D009334 4.7e-23 112.1 136 50.7
FAN18G2754 Fragaria x ananassa HOM05D007425 ORTHO05D009334 4.7e-23 112.1 136 50.7
Ciclev10006055m.g Citrus clementina HOM05D007425 ORTHO05D009334 6.1e-23 111.7 71 78.9
LjContig00408g0025154 Lotus japonicus HOM05D007425 ORTHO05D009334 6.1e-23 111.7 96 62.5
PSO017G2433 Papaver somniferum HOM05D007425 ORTHO05D009334 6.8e-22 108.2 147 49.7
PSO170G1990 Papaver somniferum HOM05D007425 ORTHO05D009334 2.0e-21 106.7 116 56.9
Nitab4.5_0000043g0080 Nicotiana tabacum HOM05D007425 ORTHO05D009334 5.7e-21 105.1 169 46.2
arahy.Tifrunner.gnm1.ann1.CGGZ98 Arachis hypogaea HOM05D007425 ORTHO05D009334 7.5e-21 104.8 79 69.6
MBI16_g00841_MAGBIO Magnolia biondii HOM05D007425 ORTHO05D009334 7.5e-21 104.8 135 54.1
Aqoxy7G02632 Aquilegia oxysepala HOM05D007425 ORTHO05D009334 9.8e-21 104.4 137 49.6
ATR0626G045 Amborella trichopoda HOM05D007425 ORTHO05D009334 2.8e-20 102.8 65 76.9
TAR636G0596 Trochodendron aralioides HOM05D007425 ORTHO05D009334 3.7e-20 102.4 67 77.6
Ca_04746_v3 Cicer arietinum L. HOM05D007425 ORTHO05D009334 6.3e-20 101.7 76 72.4
Medtr5g038520 Medicago truncatula HOM05D007425 ORTHO05D009334 6.3e-20 101.7 118 51.7
SGA_v2.0_scaffold52G19002 Striga asiatica HOM05D006387 ORTHO05D008533 6.3e-20 101.7 88 67.0
CDE04G2079 Ceratophyllum demersum HOM05D007425 ORTHO05D009334 2.4e-19 99.8 115 53.9
Psat2g124560 Pisum sativum HOM05D007425 ORTHO05D009334 2.4e-19 99.8 153 43.8
HPP92_010419 Vanilla planifolia HOM05D007425 ORTHO05D009334 9.2e-19 97.8 142 45.1
Lalb_Chr05g0211001 Lupinus albus HOM05D007425 ORTHO05D009334 5.9e-18 95.1 84 58.3
Os04g0306750 Oryza sativa ssp. japonica HOM05D007425 ORTHO05D009334 1.9e-16 90.1 60 70.0
Zm00001eb375110 Zea mays HOM05D007425 ORTHO05D009334 1.9e-16 90.1 123 48.8
SEGI_06187 Sequoiadendron giganteum HOM05D007425 ORTHO05D009334 2.0e-13 80.1 61 65.6
AUR62034746 Chenopodium quinoa HOM05D007425 ORTHO05D009334 9.2e-11 71.2 154 37.7
Pp3c2_27330 Physcomitrium patens HOM05D007425 ORTHO05D009334 4.6e-10 68.9 125 37.6
Os08g0399050 Oryza sativa ssp. japonica HOM05D007425 ORTHO05D009334 1.0e-09 67.8 69 55.1
Mapoly0070s0085 Marchantia polymorpha HOM05D007425 ORTHO05D009334 8.6e-09 64.7 107 38.3
SMO358G0357 Selaginella moellendorffii HOM05D013303 ORTHO05D015288 1.8e-06 57.0 102 39.2


User provided reference genes

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