Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.24709 Avicennia marina HOM05D006636 ORTHO05D008266 6.8e-54 213.8 110 100.0
Migut.N00229 Erythranthe guttata HOM05D006636 ORTHO05D008266 2.3e-30 135.6 74 89.2
Oeu029765.1 Olea europaea HOM05D006636 ORTHO05D008266 4.0e-30 134.8 74 87.8
SalBow2G2841 Salvia bowleyana HOM05D006636 ORTHO05D008266 3.4e-29 131.7 77 83.1
Dinv44607 Davidia involucrata HOM05D006636 ORTHO05D008266 5.8e-29 131.0 74 85.1
Gohir.D02G041800 Gossypium hirsutum HOM05D006636 ORTHO05D008266 5.8e-29 131.0 78 82.1
Gorai.005G046200 Gossypium raimondii HOM05D006636 ORTHO05D008266 5.8e-29 131.0 78 82.1
CSS0008233 Camellia sinensis var. sinensis HOM05D006636 ORTHO05D008266 7.5e-29 130.6 73 86.3
CSS0036965 Camellia sinensis var. sinensis HOM05D006636 ORTHO05D008266 7.5e-29 130.6 73 86.3
Cc03_g04590 Coffea canephora HOM05D006636 ORTHO05D008266 7.5e-29 130.6 77 83.1
ECA240G3921 Erigeron canadensis HOM05D006636 ORTHO05D008266 7.5e-29 130.6 75 85.3
Atru.chr4.2290 Acer truncatum HOM05D006636 ORTHO05D008266 1.3e-28 129.8 77 84.4
Gohir.D10G147800 Gossypium hirsutum HOM05D006636 ORTHO05D008266 1.3e-28 129.8 77 81.8
Gorai.011G165000 Gossypium raimondii HOM05D006636 ORTHO05D008266 1.3e-28 129.8 77 81.8
Gohir.A02G035000 Gossypium hirsutum HOM05D006636 ORTHO05D008266 2.2e-28 129.0 77 81.8
Lsat_1_v5_gn_3_124880 Lactuca sativa HOM05D006636 ORTHO05D008266 2.2e-28 129.0 77 83.1
Gohir.A10G118900 Gossypium hirsutum HOM05D006636 ORTHO05D008266 2.9e-28 128.6 77 80.5
Oeu032618.1 Olea europaea HOM05D006636 ORTHO05D008266 6.4e-28 127.5 74 83.8
Thecc.04G243200 Theobroma cacao HOM05D006636 ORTHO05D008266 6.4e-28 127.5 74 85.1
vmacro15399 Vaccinium macrocarpon HOM05D006636 ORTHO05D008266 6.4e-28 127.5 74 82.4
CiPaw.02G118100 Carya illinoinensis HOM05D006636 ORTHO05D008266 8.3e-28 127.1 77 81.8
Manes.03G170500 Manihot esculenta HOM05D006636 ORTHO05D008266 4.1e-27 124.8 74 82.4
Lsat_1_v5_gn_6_37261 Lactuca sativa HOM05D006636 ORTHO05D008266 7.1e-27 124.0 73 83.6
Eucgr.H03183 Eucalyptus grandis HOM05D006636 ORTHO05D008266 9.2e-27 123.6 78 78.2
CSS0035223 Camellia sinensis var. sinensis HOM05D006636 ORTHO05D008266 1.2e-26 123.2 74 78.4
CiPaw.01G192900 Carya illinoinensis HOM05D006636 ORTHO05D008266 1.2e-26 123.2 77 80.5
Dinv14071 Davidia involucrata HOM05D006636 ORTHO05D008266 1.6e-26 122.9 66 89.4
Duzib212G0484 Durio zibethinus HOM05D006636 ORTHO05D008266 1.6e-26 122.9 77 77.9
Cfa008404 Carpinus fangiana HOM05D006636 ORTHO05D008266 2.1e-26 122.5 75 78.7
Nn3g19491 Nelumbo nucifera HOM05D006636 ORTHO05D008266 2.1e-26 122.5 74 81.1
Ah.02g129360 Amaranthus hybridus HOM05D006636 ORTHO05D008266 7.8e-26 120.6 77 76.6
arahy.Tifrunner.gnm1.ann1.G1PS4Z Arachis hypogaea HOM05D006636 ORTHO05D008266 1.0e-25 120.2 99 67.7
PSO210G2897 Papaver somniferum HOM05D006636 ORTHO05D008266 1.0e-25 120.2 74 74.3
QL06p014938 Quercus lobata HOM05D006636 ORTHO05D008266 1.3e-25 119.8 74 81.1
Peaxi162Scf00788g00311 Petunia axillaris HOM05D006636 ORTHO05D008266 1.7e-25 119.4 74 77.0
Ah.03g134670 Amaranthus hybridus HOM05D006636 ORTHO05D008266 2.3e-25 119.0 75 77.3
Manes.15G035100 Manihot esculenta HOM05D006636 ORTHO05D008266 2.3e-25 119.0 77 75.3
PSO832G4373 Papaver somniferum HOM05D006636 ORTHO05D008266 3.9e-25 118.2 74 75.7
Hund25206 Selenicereus undatus HOM05D006636 ORTHO05D008266 3.9e-25 118.2 75 76.0
BcaB04g18245 Brassica carinata HOM05D006636 ORTHO05D008266 6.6e-25 117.5 76 75.0
A08p11260 Brassica napus HOM05D006636 ORTHO05D008266 6.6e-25 117.5 76 75.0
BraA08t33120Z Brassica rapa HOM05D006636 ORTHO05D008266 6.6e-25 117.5 76 75.0
AUR62032843 Chenopodium quinoa HOM05D006636 ORTHO05D008266 6.6e-25 117.5 76 73.7
Lalb_Chr03g0037601 Lupinus albus HOM05D006636 ORTHO05D008266 6.6e-25 117.5 75 77.3
PGR142G1808 Punica granatum HOM05D006636 ORTHO05D008266 8.6e-25 117.1 75 73.3
Ciclev10006361m.g Citrus clementina HOM05D006636 ORTHO05D008266 1.1e-24 116.7 74 77.0
FAN22G1829 Fragaria x ananassa HOM05D006636 ORTHO05D008266 1.1e-24 116.7 77 71.4
Hund05854 Selenicereus undatus HOM05D006636 ORTHO05D008266 1.1e-24 116.7 75 74.7
Thhalv10026714m.g Eutrema salsugineum HOM05D006636 ORTHO05D008266 1.5e-24 116.3 74 77.0
RcHm_v2.0_Chr4g0388961 Rosa chinensis HOM05D006636 ORTHO05D008266 1.5e-24 116.3 77 71.4
Sp7g12710 Schrenkiella parvula HOM05D006636 ORTHO05D008266 1.5e-24 116.3 74 77.0
Aqoxy5G00371 Aquilegia oxysepala HOM05D006636 ORTHO05D008266 1.9e-24 115.9 74 75.7
BcaC07g37832 Brassica carinata HOM05D006636 ORTHO05D008266 1.9e-24 115.9 76 73.7
BolC8t48218H Brassica oleracea HOM05D006636 ORTHO05D008266 1.9e-24 115.9 76 73.7
Duzib151G1121 Durio zibethinus HOM05D006636 ORTHO05D008266 1.9e-24 115.9 73 76.7
Prupe.1G025800 Prunus persica HOM05D006636 ORTHO05D008266 1.9e-24 115.9 77 75.3
AUR62005850 Chenopodium quinoa HOM05D006636 ORTHO05D008266 2.5e-24 115.5 76 72.4
FAN12G3161 Fragaria x ananassa HOM05D006636 ORTHO05D008266 2.5e-24 115.5 77 70.1
Phvul.006G006400 Phaseolus vulgaris HOM05D006636 ORTHO05D008266 5.6e-24 114.4 75 76.0
Glyma.02G001300 Glycine max HOM05D006636 ORTHO05D008266 7.3e-24 114.0 75 76.0
GSVIVG01018087001 Vitis vinifera HOM05D006636 ORTHO05D008266 7.3e-24 114.0 77 70.1
COL.COLO4_15761 Corchorus olitorius HOM05D006636 ORTHO05D008266 9.5e-24 113.6 75 76.0
CARHR220860 Cardamine hirsuta HOM05D006636 ORTHO05D008266 1.2e-23 113.2 74 74.3
Nitab4.5_0001787g0030 Nicotiana tabacum HOM05D006636 ORTHO05D008266 1.2e-23 113.2 74 73.0
Nitab4.5_0001856g0080 Nicotiana tabacum HOM05D006636 ORTHO05D008266 1.2e-23 113.2 74 73.0
Sc22g0003980 Simmondsia chinensis HOM05D006636 ORTHO05D008266 1.2e-23 113.2 75 73.3
Aa31LG9G2720 Aethionema arabicum HOM05D006636 ORTHO05D008266 1.6e-23 112.8 74 73.0
CANSAT80G2460 Cannabis sativa HOM05D006636 ORTHO05D008266 1.6e-23 112.8 74 74.3
Phvul.010G060600 Phaseolus vulgaris HOM05D006636 ORTHO05D008266 1.6e-23 112.8 74 75.7
TWI53G1752 Tripterygium wilfordii HOM05D006636 ORTHO05D008266 1.6e-23 112.8 77 71.4
TWI53G1902 Tripterygium wilfordii HOM05D006636 ORTHO05D008266 1.6e-23 112.8 77 71.4
EL10Ac6g13264 Beta vulgaris HOM05D006636 ORTHO05D008266 2.1e-23 112.5 74 73.0
Solyc09g083070.3 Solanum lycopersicum HOM05D006636 ORTHO05D008266 2.8e-23 112.1 74 73.0
ClCG06G006590 Citrullus lanatus HOM05D006636 ORTHO05D008266 3.6e-23 111.7 74 74.3
Potri.010G079100 Populus trichocarpa HOM05D006636 ORTHO05D008266 4.7e-23 111.3 77 71.4
AT4G14615 Arabidopsis thaliana HOM05D006636 ORTHO05D008266 8.1e-23 110.5 74 71.6
MD16G1204700 Malus domestica HOM05D006636 ORTHO05D008266 8.1e-23 110.5 73 71.2
Sopen09g031950 Solanum pennellii HOM05D006636 ORTHO05D008266 8.1e-23 110.5 74 71.6
Sed0018024 Sechium edule HOM05D006636 ORTHO05D008266 1.1e-22 110.2 74 73.0
TAR365G0562 Trochodendron aralioides HOM05D006636 ORTHO05D008266 1.1e-22 110.2 74 71.6
Carub.0007s2759 Capsella rubella HOM05D006636 ORTHO05D008266 1.4e-22 109.8 74 71.6
CARHR043050 Cardamine hirsuta HOM05D006636 ORTHO05D008266 1.8e-22 109.4 74 71.6
Thhalv10011910m.g Eutrema salsugineum HOM05D006636 ORTHO05D008266 2.4e-22 109.0 74 71.6
Zm00001eb116910 Zea mays HOM05D006636 ORTHO05D008266 3.1e-22 108.6 73 72.6
AL1G61120 Arabidopsis lyrata HOM05D006636 ORTHO05D008266 5.2e-22 107.8 74 70.3
AL7G41500 Arabidopsis lyrata HOM05D006636 ORTHO05D008266 5.2e-22 107.8 74 70.3
CAN.G749.28 Capsicum annuum HOM05D006636 ORTHO05D008266 5.2e-22 107.8 73 69.9
MD13G1203300 Malus domestica HOM05D006636 ORTHO05D008266 5.2e-22 107.8 73 68.5
Potri.008G160101 Populus trichocarpa HOM05D006636 ORTHO05D008266 6.8e-22 107.5 77 70.1
ATR0665G452 Amborella trichopoda HOM05D006636 ORTHO05D008266 8.9e-22 107.1 67 74.6
Os07g0181800 Oryza sativa ssp. japonica HOM05D006636 ORTHO05D008266 8.9e-22 107.1 73 68.5
THA.LOC104808586 Tarenaya hassleriana HOM05D006636 ORTHO05D008266 8.9e-22 107.1 74 73.0
AT1G52825 Arabidopsis thaliana HOM05D006636 ORTHO05D008266 4.4e-21 104.8 73 69.9
HPP92_009619 Vanilla planifolia HOM05D006636 ORTHO05D008266 2.9e-20 102.1 72 69.4
Medtr1g040905 Medicago truncatula HOM05D006636 ORTHO05D008266 3.8e-20 101.7 78 69.2
CDE07G1452 Ceratophyllum demersum HOM05D006636 ORTHO05D008266 6.4e-20 100.9 75 62.7
Psat4g201760 Pisum sativum HOM05D000716 ORTHO05D009512 1.1e-19 100.1 80 65.0
Haze_11264 Corylus avellana HOM05D006636 ORTHO05D008266 1.4e-19 99.8 105 54.3
TPR.G32796 Trifolium pratense HOM05D006636 ORTHO05D008266 1.4e-19 99.8 76 68.4
Ca_12203_v3 Cicer arietinum L. HOM05D006636 ORTHO05D008266 1.9e-19 99.4 76 67.1
Psat6g136920 Pisum sativum HOM05D006636 ORTHO05D008266 1.9e-19 99.4 76 68.4
TWI73G0386 Tripterygium wilfordii HOM05D006636 ORTHO05D008266 2.4e-19 99.0 74 64.9
Lj3g0021432 Lotus japonicus HOM05D006636 ORTHO05D008266 5.4e-19 97.8 76 69.7
Carub.0001s4194 Capsella rubella HOM05D006636 ORTHO05D008266 7.8e-18 94.0 67 68.7
Psat4g152400 Pisum sativum HOM05D006636 ORTHO05D008266 3.0e-17 92.0 76 64.5
Pp3c4_21990 Physcomitrium patens HOM05D006636 ORTHO05D008266 6.6e-17 90.9 68 57.4
Sabra10G0063800 Salix brachista HOM05D006636 ORTHO05D008266 2.5e-16 89.0 119 45.4
Psat4g152480 Pisum sativum HOM05D000716 ORTHO05D009512 9.6e-16 87.0 70 65.7
HanXRQChr13g0424641 Helianthus annuus HOM05D006636 ORTHO05D008266 8.1e-15 84.0 47 85.1
Mapoly0075s0084 Marchantia polymorpha HOM05D006636 ORTHO05D008266 8.1e-15 84.0 68 52.9
SalBow4G0852 Salvia bowleyana HOM05D006636 ORTHO05D008266 3.4e-13 78.6 43 86.0
unitig_26.g9474 Utricularia gibba HOM05D006636 ORTHO05D008266 2.9e-12 75.5 43 81.4
Actinidia40100 Actinidia chinensis HOM05D006636 ORTHO05D008266 8.4e-12 73.9 45 77.8
AagrBONN_evm.TU.Sc2ySwM_117.3049 Anthoceros agrestis HOM05D006636 ORTHO05D008266 1.1e-11 73.6 62 54.8
PGSC0003DMG400006103 Solanum tuberosum HOM05D006636 ORTHO05D008266 2.7e-10 68.9 41 75.6
Psat0s152g0080 Pisum sativum HOM05D006636 ORTHO05D008266 2.3e-09 65.9 57 59.6
MCO07G270 Micromonas commoda HOM05D006636 ORTHO05D008266 6.6e-09 64.3 63 47.6
SHI00567 Sapria himalayana HOM05D006636 ORTHO05D008266 6.6e-09 64.3 43 74.4
Rhsim02G0032300 Rhododendron simsii HOM05D006636 ORTHO05D008266 6.2e-07 57.8 32 78.1
GSVIVG01002945001 Vitis vinifera HOM05D006636 ORTHO05D008266 8.1e-07 57.4 50 56.0
MBI04_g19760_MAGBIO Magnolia biondii HOM05D006636 ORTHO05D008266 6.9e-06 54.3 31 74.2


User provided reference genes

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