Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.24645 Avicennia marina HOM05D005697 ORTHO05D006951 7.7e-124 447.2 232 100.0
MSTRG.21934 Avicennia marina HOM05D005697 ORTHO05D006951 3.6e-65 252.3 229 64.2
Oeu008818.1 Olea europaea HOM05D005697 ORTHO05D006951 2.8e-57 226.1 221 62.9
SalBow3G1865 Salvia bowleyana HOM05D005697 ORTHO05D006951 2.4e-56 223.0 225 59.1
SalBow3G3550 Salvia bowleyana HOM05D005697 ORTHO05D006951 1.2e-55 220.7 225 58.7
Oeu007537.1 Olea europaea HOM05D005697 ORTHO05D006951 4.9e-54 215.3 215 60.5
Cc03_g06970 Coffea canephora HOM05D005697 ORTHO05D006951 1.5e-47 193.7 217 53.9
Peaxi162Scf01007g00013 Petunia axillaris HOM05D005697 ORTHO05D006951 7.6e-47 191.4 231 50.2
Nitab4.5_0002738g0060 Nicotiana tabacum HOM05D005697 ORTHO05D006951 4.2e-45 185.7 228 52.2
Dinv27139 Davidia involucrata HOM05D005697 ORTHO05D006951 6.0e-44 181.8 232 50.4
FAN07G2767 Fragaria x ananassa HOM05D005697 ORTHO05D006951 3.9e-43 179.1 239 47.3
FvH4_4g05260 Fragaria vesca HOM05D005697 ORTHO05D006951 5.1e-43 178.7 240 46.7
FAN12G1366 Fragaria x ananassa HOM05D005697 ORTHO05D006951 6.7e-43 178.3 240 46.7
FAN22G1047 Fragaria x ananassa HOM05D005697 ORTHO05D006951 1.1e-42 177.6 239 46.9
QL06p022167 Quercus lobata HOM05D005697 ORTHO05D006951 1.5e-42 177.2 206 49.5
CiPaw.02G104000 Carya illinoinensis HOM05D005697 ORTHO05D006951 1.9e-42 176.8 209 48.3
CiPaw.01G174800 Carya illinoinensis HOM05D005697 ORTHO05D006951 2.5e-42 176.4 205 50.2
FAN17G2424 Fragaria x ananassa HOM05D005697 ORTHO05D006951 4.3e-42 175.6 239 46.9
RcHm_v2.0_Chr4g0396171 Rosa chinensis HOM05D005697 ORTHO05D006951 9.6e-42 174.5 240 47.1
Prupe.1G054100 Prunus persica HOM05D005697 ORTHO05D006951 4.8e-41 172.2 220 48.6
Nitab4.5_0001998g0050 Nicotiana tabacum HOM05D005697 ORTHO05D006951 6.2e-41 171.8 221 50.2
PGSC0003DMG400008629 Solanum tuberosum HOM05D005697 ORTHO05D006951 6.2e-41 171.8 226 46.5
AUR62035897 Chenopodium quinoa HOM05D005697 ORTHO05D006951 1.4e-40 170.6 248 46.0
Thecc.04G218700 Theobroma cacao HOM05D005697 ORTHO05D006951 1.8e-40 170.2 221 50.2
AUR62035343 Chenopodium quinoa HOM05D005697 ORTHO05D006951 2.4e-40 169.9 232 48.7
Solyc12g097060.1 Solanum lycopersicum HOM05D005697 ORTHO05D006951 2.4e-40 169.9 226 45.6
MD13G1226700 Malus domestica HOM05D005697 ORTHO05D006951 5.3e-40 168.7 220 47.7
Solyc09g091060.3 Solanum lycopersicum HOM05D005697 ORTHO05D006951 5.3e-40 168.7 227 47.6
CSS0038279 Camellia sinensis var. sinensis HOM05D005697 ORTHO05D006951 9.0e-40 167.9 256 44.9
Nn1g03052 Nelumbo nucifera HOM05D005697 ORTHO05D006951 9.0e-40 167.9 229 47.2
Sabra10G0044100 Salix brachista HOM05D005697 ORTHO05D006951 1.2e-39 167.5 204 49.5
Haze_11522 Corylus avellana HOM05D005697 ORTHO05D006951 2.0e-39 166.8 204 49.5
Migut.N00325 Erythranthe guttata HOM05D005697 ORTHO05D006951 2.6e-39 166.4 231 51.5
Haze_11516 Corylus avellana HOM05D005697 ORTHO05D006951 4.5e-39 165.6 204 49.0
Duzib151G0493 Durio zibethinus HOM05D005697 ORTHO05D006951 4.5e-39 165.6 219 47.9
Cpa.g.sc59.48 Carica papaya HOM05D005697 ORTHO05D006951 1.3e-38 164.1 207 50.2
Lsat_1_v5_gn_6_67840 Lactuca sativa HOM05D005697 ORTHO05D006951 1.7e-38 163.7 193 50.3
Rhsim02G0049300 Rhododendron simsii HOM05D005697 ORTHO05D006951 2.2e-38 163.3 210 48.6
SGA_v2.0_scaffold31G12607 Striga asiatica HOM05D005697 ORTHO05D006951 1.1e-37 161.0 226 49.1
arahy.Tifrunner.gnm1.ann1.BKX7X4 Arachis hypogaea HOM05D005697 ORTHO05D006951 1.4e-37 160.6 228 47.4
Cfa014837 Carpinus fangiana HOM05D005697 ORTHO05D006951 1.4e-37 160.6 215 46.0
Eucgr.H02876 Eucalyptus grandis HOM05D005697 ORTHO05D006951 1.9e-37 160.2 209 52.2
Potri.010G062600 Populus trichocarpa HOM05D005697 ORTHO05D006951 5.5e-37 158.7 203 48.3
Glyma.20G081000 Glycine max HOM05D005697 ORTHO05D006951 2.1e-36 156.8 230 44.3
Sopen09g034040 Solanum pennellii HOM05D005697 ORTHO05D006951 3.5e-36 156.0 227 44.5
TWI53G2060 Tripterygium wilfordii HOM05D005697 ORTHO05D006951 7.9e-36 154.8 225 47.6
EL10Ac3g06730 Beta vulgaris HOM05D005697 ORTHO05D006951 1.3e-35 154.1 209 45.5
arahy.Tifrunner.gnm1.ann1.1SMG72 Arachis hypogaea HOM05D005697 ORTHO05D006951 3.9e-35 152.5 233 45.1
Ah.13g075010 Amaranthus hybridus HOM05D005697 ORTHO05D006951 5.1e-35 152.1 225 44.0
TPR.G23989 Trifolium pratense HOM05D005697 ORTHO05D006951 1.1e-34 151.0 234 40.6
vmacro15494 Vaccinium macrocarpon HOM05D005697 ORTHO05D006951 1.1e-34 151.0 227 46.3
TWI09G0842 Tripterygium wilfordii HOM05D005697 ORTHO05D006951 1.9e-34 150.2 217 48.4
DCAR_024305 Daucus carota HOM05D005697 ORTHO05D006951 2.5e-34 149.8 229 42.8
TAR365G1050 Trochodendron aralioides HOM05D005697 ORTHO05D006951 4.3e-34 149.1 210 46.2
Glyma.10G130200 Glycine max HOM05D005697 ORTHO05D006951 5.6e-34 148.7 222 44.1
Manes.03G155600 Manihot esculenta HOM05D005697 ORTHO05D006951 1.3e-33 147.5 227 44.1
Hund24861 Selenicereus undatus HOM05D005697 ORTHO05D006951 1.3e-33 147.5 234 44.9
Atru.chr4.1856 Acer truncatum HOM05D005697 ORTHO05D006951 3.7e-33 146.0 219 45.2
CAN.G812.40 Capsicum annuum HOM05D005697 ORTHO05D006951 3.7e-33 146.0 239 42.7
Peaxi162Scf00125g01016 Petunia axillaris HOM05D005697 ORTHO05D006951 6.2e-33 145.2 236 45.3
ECA233G3140 Erigeron canadensis HOM05D005697 ORTHO05D006951 1.8e-32 143.7 177 49.7
VMungo0720G1671 Vigna mungo HOM05D005697 ORTHO05D006951 2.4e-32 143.3 211 46.0
Sabra08G0132900 Salix brachista HOM05D005697 ORTHO05D006951 4.0e-32 142.5 205 45.4
MBI07_g15425_MAGBIO Magnolia biondii HOM05D005697 ORTHO05D006951 5.3e-32 142.1 230 43.9
Duzib212G0179 Durio zibethinus HOM05D005697 ORTHO05D006951 1.5e-31 140.6 222 44.6
Lalb_Chr19g0128591 Lupinus albus HOM05D005697 ORTHO05D006951 2.0e-31 140.2 196 46.9
CANSAT78G1745 Cannabis sativa HOM05D005697 ORTHO05D006951 5.8e-31 138.7 199 43.7
COL.COLO4_07143 Corchorus olitorius HOM05D005697 ORTHO05D006951 5.8e-31 138.7 235 43.0
TAR362G0923 Trochodendron aralioides HOM05D005697 ORTHO05D006951 1.0e-30 137.9 203 45.3
Nn3g19835 Nelumbo nucifera HOM05D005697 ORTHO05D006951 1.3e-30 137.5 251 40.2
Sc19g0005740 Simmondsia chinensis HOM05D005697 ORTHO05D006951 1.3e-30 137.5 163 52.1
Potri.008G174400 Populus trichocarpa HOM05D005697 ORTHO05D006951 1.7e-30 137.1 215 43.7
Lalb_Chr03g0036851 Lupinus albus HOM05D005697 ORTHO05D006951 2.2e-30 136.7 218 43.1
Gorai.006G218600 Gossypium raimondii HOM05D005697 ORTHO05D006951 4.9e-30 135.6 183 48.1
Medtr1g046070 Medicago truncatula HOM05D005697 ORTHO05D006951 1.4e-29 134.0 232 42.7
Gohir.D09G195200 Gossypium hirsutum HOM05D005697 ORTHO05D006951 2.5e-29 133.3 183 48.1
CsaV3_1G001240 Cucumis sativus L. HOM05D005697 ORTHO05D006951 1.2e-28 131.0 216 41.2
Manes.15G047800 Manihot esculenta HOM05D005697 ORTHO05D006951 1.6e-28 130.6 217 41.0
Sed0003887 Sechium edule HOM05D005697 ORTHO05D006951 2.7e-28 129.8 211 41.2
ClCG06G017260 Citrullus lanatus HOM05D005697 ORTHO05D006951 1.3e-27 127.5 211 40.8
Phvul.007G233100 Phaseolus vulgaris HOM05D005697 ORTHO05D006951 2.3e-27 126.7 187 46.5
Sed0013611 Sechium edule HOM05D005697 ORTHO05D006951 2.3e-27 126.7 216 38.9
Gohir.A09G201000 Gossypium hirsutum HOM05D005697 ORTHO05D006951 1.5e-26 124.0 183 45.4
Lj6g0023034 Lotus japonicus HOM05D005697 ORTHO05D006951 1.5e-26 124.0 187 46.0
PSO063G5372 Papaver somniferum HOM05D005697 ORTHO05D006951 1.9e-26 123.6 221 40.3
PSO339G1845 Papaver somniferum HOM05D005697 ORTHO05D006951 1.6e-25 120.6 230 39.1
CAN.G566.3 Capsicum annuum HOM05D005697 ORTHO05D006951 6.9e-24 115.2 128 53.1
Actinidia39942 Actinidia chinensis HOM05D005697 ORTHO05D006951 3.4e-23 112.8 180 43.9
Actinidia11384 Actinidia chinensis HOM05D005697 ORTHO05D006951 5.9e-23 112.1 99 63.6
GSVIVG01001870001 Vitis vinifera HOM05D005697 ORTHO05D006951 7.6e-23 111.7 114 59.6
MELO3C026270.2 Cucumis melo HOM05D005697 ORTHO05D006951 1.7e-22 110.5 216 37.5
THA.LOC104804567 Tarenaya hassleriana HOM05D005697 ORTHO05D006951 1.7e-22 110.5 200 43.0
THA.LOC104808734 Tarenaya hassleriana HOM05D005697 ORTHO05D006951 6.5e-22 108.6 185 44.9
CDE05G2497 Ceratophyllum demersum HOM05D005697 ORTHO05D006951 7.2e-21 105.1 218 38.5
HPP92_005453 Vanilla planifolia HOM05D005697 ORTHO05D006951 1.2e-20 104.4 201 39.8
unitig_26.g9545 Utricularia gibba HOM05D005697 ORTHO05D006951 3.6e-20 102.8 200 35.5
BcaC02g09418 Brassica carinata HOM05D005697 ORTHO05D006951 4.6e-20 102.4 213 39.0
BolC4t25821H Brassica oleracea HOM05D005697 ORTHO05D006951 4.6e-20 102.4 213 39.0
PGSC0003DMG400011585 Solanum tuberosum HOM05D005697 ORTHO05D006951 4.6e-20 102.4 175 41.1
A04p08640 Brassica napus HOM05D005697 ORTHO05D006951 1.0e-19 101.3 174 42.5
BcaB03g16086 Brassica carinata HOM05D005697 ORTHO05D006951 1.4e-19 100.9 217 38.2
Ciclev10005805m.g Citrus clementina HOM05D005697 ORTHO05D006951 1.4e-19 100.9 176 39.2
Sp7g11140 Schrenkiella parvula HOM05D005697 ORTHO05D006951 1.8e-19 100.5 213 38.5
AL7G43130 Arabidopsis lyrata HOM05D005697 ORTHO05D006951 3.0e-19 99.8 200 38.5
C04p42400 Brassica napus HOM05D005697 ORTHO05D006951 3.0e-19 99.8 213 38.5
Carub.0007s2900 Capsella rubella HOM05D005697 ORTHO05D006951 3.9e-19 99.4 227 36.1
THA.LOC104821627 Tarenaya hassleriana HOM05D005697 ORTHO05D006951 1.5e-18 97.4 164 42.7
CARHR219170 Cardamine hirsuta HOM05D005697 ORTHO05D006951 2.5e-18 96.7 227 34.8
Aa31LG9G4120 Aethionema arabicum HOM05D005697 ORTHO05D006951 3.3e-18 96.3 186 39.2
AT4G13540 Arabidopsis thaliana HOM05D005697 ORTHO05D006951 5.7e-18 95.5 210 36.2
Thhalv10026312m.g Eutrema salsugineum HOM05D005697 ORTHO05D006951 1.4e-16 90.9 219 35.2
BraA07t28595Z Brassica rapa HOM05D005697 ORTHO05D006951 1.8e-16 90.5 191 39.3
Nitab4.5_0000451g0070 Nicotiana tabacum HOM05D005697 ORTHO05D006951 1.8e-16 90.5 140 42.9
BcaB06g26605 Brassica carinata HOM05D005697 ORTHO05D006951 4.5e-15 85.9 170 40.0
BcaC06g35669 Brassica carinata HOM05D005697 ORTHO05D006951 4.5e-15 85.9 191 38.2
C07p12260 Brassica napus HOM05D005697 ORTHO05D006951 4.5e-15 85.9 191 38.2
BolC7t41693H Brassica oleracea HOM05D005697 ORTHO05D006951 4.5e-15 85.9 191 38.2
CDE02G0931 Ceratophyllum demersum HOM05D005697 ORTHO05D006951 5.9e-15 85.5 184 36.4
A07p08110 Brassica napus HOM05D005697 ORTHO05D006951 1.0e-14 84.7 187 38.5
CARHR100340 Cardamine hirsuta HOM05D005697 ORTHO05D006951 6.5e-14 82.0 195 36.9
Aa31LG8G10940 Aethionema arabicum HOM05D005697 ORTHO05D006951 7.2e-13 78.6 201 34.3
AL3G39620 Arabidopsis lyrata HOM05D005697 ORTHO05D006951 1.6e-12 77.4 117 43.6
Psat6g106680 Pisum sativum HOM05D005697 ORTHO05D006951 3.6e-12 76.3 96 49.0
Glyma.14G108200 Glycine max HOM05D005697 ORTHO05D006951 7.9e-12 75.1 110 44.5
Carub.0003s2459 Capsella rubella HOM05D005697 ORTHO05D006951 1.0e-11 74.7 115 45.2
AT3G23930 Arabidopsis thaliana HOM05D005697 ORTHO05D006951 1.8e-11 73.9 112 44.6
Thhalv10002645m.g Eutrema salsugineum HOM05D005697 ORTHO05D006951 6.7e-11 72.0 228 33.8
CDE08G0630 Ceratophyllum demersum HOM05D005697 ORTHO05D006951 2.6e-10 70.1 151 33.8
Sp3g22030 Schrenkiella parvula HOM05D005697 ORTHO05D006951 7.4e-10 68.6 119 41.2
Nitab4.5_0000867g0050 Nicotiana tabacum HOM05D005697 ORTHO05D006951 1.3e-09 67.8 144 35.4
BraA04t16558Z Brassica rapa HOM05D005697 ORTHO05D006951 3.7e-09 66.2 120 38.3


User provided reference genes

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