Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.24638 Avicennia marina HOM05D006492 ORTHO05D008432 0.0e+00 1961.8 1004 100.0
Migut.N00332 Erythranthe guttata HOM05D006492 ORTHO05D008432 0.0e+00 1354.0 963 72.9
SGA_v2.0_scaffold2G00843 Striga asiatica HOM05D006492 ORTHO05D008432 0.0e+00 1313.1 1007 68.5
SalBow3G2597 Salvia bowleyana HOM05D006492 ORTHO05D008432 0.0e+00 1197.2 937 66.9
Dinv38285 Davidia involucrata HOM05D006492 ORTHO05D008432 0.0e+00 1135.9 941 62.3
Actinidia25080 Actinidia chinensis HOM05D006492 ORTHO05D008432 0.0e+00 1127.1 1006 59.2
Sopen09g034300 Solanum pennellii HOM05D006492 ORTHO05D008432 0.0e+00 1110.5 1028 55.6
Nitab4.5_0012325g0010 Nicotiana tabacum HOM05D006492 ORTHO05D008432 0.0e+00 1086.6 1052 54.2
TAR365G0557 Trochodendron aralioides HOM05D006492 ORTHO05D008432 0.0e+00 1085.1 1017 57.1
unitig_899.g15531 Utricularia gibba HOM05D006492 ORTHO05D008432 0.0e+00 1082.8 1009 57.8
GSVIVG01029042001 Vitis vinifera HOM05D006492 ORTHO05D008432 0.0e+00 1082.8 1017 56.1
Haze_11549 Corylus avellana HOM05D006492 ORTHO05D008432 0.0e+00 1081.6 1009 57.0
Nitab4.5_0000493g0030 Nicotiana tabacum HOM05D006492 ORTHO05D008432 0.0e+00 1080.5 994 55.8
Cfa014875 Carpinus fangiana HOM05D006492 ORTHO05D008432 2.7e-311 1072.0 959 58.3
TAR365G0379 Trochodendron aralioides HOM05D006492 ORTHO05D008432 6.2e-311 1070.8 1017 56.8
vmacro00516 Vaccinium macrocarpon HOM05D006492 ORTHO05D008432 8.9e-310 1067.0 1017 56.2
Potri.003G175300 Populus trichocarpa HOM05D006492 ORTHO05D008432 7.5e-309 1063.9 1009 55.4
QL05p063769 Quercus lobata HOM05D006492 ORTHO05D008432 2.4e-307 1058.9 1056 53.7
Prupe.1G060300 Prunus persica HOM05D006492 ORTHO05D008432 1.5e-301 1039.6 1017 54.8
Cc03_g07180 Coffea canephora HOM05D006492 ORTHO05D008432 2.0e-298 1029.2 1020 54.7
Potri.001G053000 Populus trichocarpa HOM05D006492 ORTHO05D008432 4.6e-298 1028.1 1006 54.1
Manes.15G049000 Manihot esculenta HOM05D006492 ORTHO05D008432 3.3e-296 1021.9 1004 55.0
Gorai.006G055600 Gossypium raimondii HOM05D006492 ORTHO05D008432 4.7e-295 1018.1 1011 52.1
Thecc.04G212600 Theobroma cacao HOM05D006492 ORTHO05D008432 1.4e-294 1016.5 1005 52.7
Gohir.D09G053008 Gossypium hirsutum HOM05D006492 ORTHO05D008432 3.1e-294 1015.4 1011 52.1
Oeu051651.1 Olea europaea HOM05D006492 ORTHO05D008432 5.2e-294 1014.6 773 67.9
MD00G1101100 Malus domestica HOM05D006492 ORTHO05D008432 8.9e-294 1013.8 1017 54.1
CSS0015325 Camellia sinensis var. sinensis HOM05D006492 ORTHO05D008432 1.2e-290 1003.4 883 59.8
Peaxi162Scf00047g01324 Petunia axillaris HOM05D006492 ORTHO05D008432 2.1e-290 1002.7 993 53.1
RcHm_v2.0_Chr4g0396881 Rosa chinensis HOM05D006492 ORTHO05D008432 7.8e-290 1000.7 1016 53.3
FAN12G2087 Fragaria x ananassa HOM05D006492 ORTHO05D008432 1.6e-287 993.0 1009 52.6
FAN22G2187 Fragaria x ananassa HOM05D006492 ORTHO05D008432 8.1e-287 990.7 1018 52.7
Rhsim09G0049200 Rhododendron simsii HOM05D006492 ORTHO05D008432 4.4e-285 984.9 1067 51.3
FAN07G0933 Fragaria x ananassa HOM05D006492 ORTHO05D008432 7.6e-285 984.2 1029 52.2
Ciclev10004244m.g Citrus clementina HOM05D006492 ORTHO05D008432 1.1e-283 980.3 1010 51.7
Duzib212G0418 Durio zibethinus HOM05D006492 ORTHO05D008432 5.4e-283 978.0 946 53.5
COL.COLO4_34090 Corchorus olitorius HOM05D006492 ORTHO05D008432 1.0e-281 973.8 1007 51.8
ECA233G5226 Erigeron canadensis HOM05D006492 ORTHO05D008432 1.5e-280 969.9 999 52.7
Nn1g03104 Nelumbo nucifera HOM05D006492 ORTHO05D008432 1.2e-279 966.8 1015 51.2
Sabra01G0037500 Salix brachista HOM05D006492 ORTHO05D008432 2.1e-279 966.1 1006 52.4
HanXRQChr07g0185861 Helianthus annuus HOM05D006492 ORTHO05D008432 3.4e-277 958.7 1000 51.7
TWI09G1643 Tripterygium wilfordii HOM05D006492 ORTHO05D008432 3.4e-277 958.7 1050 50.1
CiPaw.01G204100 Carya illinoinensis HOM05D006492 ORTHO05D008432 1.6e-274 949.9 904 55.5
CAN.G1552.5 Capsicum annuum HOM05D006492 ORTHO05D008432 4.6e-274 948.3 887 54.5
CANSAT78G0108 Cannabis sativa HOM05D006492 ORTHO05D008432 1.8e-270 936.4 1019 50.1
Hund24849 Selenicereus undatus HOM05D006492 ORTHO05D008432 4.2e-267 925.2 1011 49.9
arahy.Tifrunner.gnm1.ann1.TP3X9S Arachis hypogaea HOM05D006492 ORTHO05D008432 4.6e-266 921.8 1002 48.0
Lju414A5T31 Lonicera japonica HOM05D006492 ORTHO05D008432 1.3e-265 920.2 837 57.7
EL10Ac3g06781 Beta vulgaris HOM05D006492 ORTHO05D008432 1.8e-262 909.8 1015 48.9
FAN17G1964 Fragaria x ananassa HOM05D006492 ORTHO05D008432 3.8e-260 902.1 1044 48.9
ClCG05G003620 Citrullus lanatus HOM05D006492 ORTHO05D008432 1.1e-259 900.6 1039 47.6
PGR142G2376 Punica granatum HOM05D006492 ORTHO05D008432 7.1e-259 897.9 1005 48.8
Sed0001454 Sechium edule HOM05D006492 ORTHO05D008432 3.3e-256 889.0 1015 48.1
DCAR_002278 Daucus carota HOM05D006492 ORTHO05D008432 9.6e-256 887.5 907 52.6
Glyma.10G192800 Glycine max HOM05D006492 ORTHO05D008432 1.6e-255 886.7 1012 46.8
MBI10_g16832_MAGBIO Magnolia biondii HOM05D006492 ORTHO05D008432 1.4e-254 883.6 970 50.9
Glyma.20G197700 Glycine max HOM05D006492 ORTHO05D008432 2.6e-253 879.4 966 47.8
CsaV3_3G011330 Cucumis sativus L. HOM05D006492 ORTHO05D008432 9.3e-251 870.9 1027 46.5
Sc14g0004710 Simmondsia chinensis HOM05D006492 ORTHO05D008432 3.9e-249 865.5 1009 46.3
Phvul.007G134600 Phaseolus vulgaris HOM05D006492 ORTHO05D008432 1.3e-247 860.5 1001 45.8
Lsat_1_v5_gn_6_62680 Lactuca sativa HOM05D006492 ORTHO05D008432 1.2e-245 854.0 1008 47.8
Cpa.g.sc59.86 Carica papaya HOM05D006492 ORTHO05D008432 1.7e-244 850.1 891 51.0
Lj5g0018955 Lotus japonicus HOM05D006492 ORTHO05D008432 2.9e-244 849.4 985 46.6
TPR.G13408 Trifolium pratense HOM05D006492 ORTHO05D008432 2.9e-244 849.4 968 46.8
THA.LOC104816017 Tarenaya hassleriana HOM05D006492 ORTHO05D008432 1.0e-241 840.9 999 45.1
CARHR004030 Cardamine hirsuta HOM05D006492 ORTHO05D008432 2.2e-239 833.2 992 44.4
AT1G04650 Arabidopsis thaliana HOM05D006492 ORTHO05D008432 4.8e-239 832.0 998 44.1
AL1G14360 Arabidopsis lyrata HOM05D006492 ORTHO05D008432 4.1e-238 828.9 999 43.2
Medtr1g090050 Medicago truncatula HOM05D006492 ORTHO05D008432 4.1e-238 828.9 971 45.6
Sp1g03490 Schrenkiella parvula HOM05D006492 ORTHO05D008432 2.6e-237 826.2 993 44.2
Aqoxy2G03837 Aquilegia oxysepala HOM05D006492 ORTHO05D008432 3.6e-234 815.8 1015 45.1
AUR62035934 Chenopodium quinoa HOM05D006492 ORTHO05D008432 2.3e-233 813.1 1014 44.2
Carub.0001s0390 Capsella rubella HOM05D006492 ORTHO05D008432 6.7e-233 811.6 991 43.2
BolC8t46943H Brassica oleracea HOM05D006492 ORTHO05D008432 3.3e-232 809.3 996 43.9
Ah.04g153340 Amaranthus hybridus HOM05D006492 ORTHO05D008432 4.3e-232 808.9 915 46.7
C08p01350 Brassica napus HOM05D006492 ORTHO05D008432 6.3e-231 805.1 996 43.7
PSO017G3024 Papaver somniferum HOM05D006492 ORTHO05D008432 1.8e-230 803.5 1038 45.6
BraA08t35581Z Brassica rapa HOM05D006492 ORTHO05D008432 2.4e-230 803.1 1001 43.6
Thhalv10006668m.g Eutrema salsugineum HOM05D006492 ORTHO05D008432 4.1e-230 802.4 1012 42.9
ATR0787G047 Amborella trichopoda HOM05D006492 ORTHO05D008432 1.2e-229 800.8 1031 44.3
PSO063G2396 Papaver somniferum HOM05D006492 ORTHO05D008432 2.0e-229 800.0 1034 46.0
A08p36780 Brassica napus HOM05D006492 ORTHO05D008432 5.0e-228 795.4 992 43.3
Psat6g170280 Pisum sativum HOM05D006492 ORTHO05D008432 5.0e-228 795.4 1026 43.5
Lalb_Chr21g0312661 Lupinus albus HOM05D006492 ORTHO05D008432 4.2e-227 792.3 903 47.7
A10p03080 Brassica napus HOM05D006492 ORTHO05D008432 1.4e-225 787.3 992 43.2
VMungo0720G0701 Vigna mungo HOM05D006492 ORTHO05D008432 6.3e-223 778.5 902 46.1
Eucgr.H00098 Eucalyptus grandis HOM05D006492 ORTHO05D008432 1.4e-222 777.3 896 46.2
Ca_10406_v3 Cicer arietinum L. HOM05D006492 ORTHO05D008432 2.7e-213 746.5 922 45.0
Solyc09g091370.4 Solanum lycopersicum HOM05D006492 ORTHO05D008432 5.7e-208 728.8 680 55.7
Aa31LG1G20220 Aethionema arabicum HOM05D006492 ORTHO05D008432 2.7e-205 719.9 999 39.2
Zm00001eb003580 Zea mays HOM05D006492 ORTHO05D008432 5.6e-195 685.6 1022 39.7
FvH4_4g05680 Fragaria vesca HOM05D006492 ORTHO05D008432 1.8e-193 680.6 706 51.3
BcaC07g36892 Brassica carinata HOM05D006492 ORTHO05D008432 8.9e-193 678.3 901 41.2
MELO3C006341.2 Cucumis melo HOM05D006492 ORTHO05D008432 1.5e-192 677.6 811 44.4
Atru.chr4.1802 Acer truncatum HOM05D006492 ORTHO05D008432 3.7e-191 672.9 658 52.7
vmacro22821 Vaccinium macrocarpon HOM05D006492 ORTHO05D008432 3.9e-188 662.9 939 44.4
CDE04G0311 Ceratophyllum demersum HOM05D006492 ORTHO05D008432 3.6e-186 656.4 830 43.1
Os03g0144000 Oryza sativa ssp. japonica HOM05D006492 ORTHO05D008432 1.1e-177 628.2 1037 38.1
SHI00019 Sapria himalayana HOM05D006492 ORTHO05D000009 2.1e-162 577.4 892 39.2
SEGI_21616 Sequoiadendron giganteum HOM05D006492 ORTHO05D008432 1.8e-148 531.2 914 36.4
BraA10t42581Z Brassica rapa HOM05D006492 ORTHO05D008432 2.0e-136 491.1 1004 31.9
Pp3c16_18660 Physcomitrium patens HOM05D006492 ORTHO05D008432 1.6e-72 278.9 1007 25.1
HPP92_025559 Vanilla planifolia HOM05D006492 ORTHO05D008432 6.4e-66 256.9 648 31.0
HPP92_025560 Vanilla planifolia HOM05D006492 ORTHO05D008432 9.2e-57 226.5 319 43.3
arahy.Tifrunner.gnm1.ann1.LCJ3P1 Arachis hypogaea HOM05D006492 ORTHO05D008432 1.2e-56 226.1 269 43.5
SMO117G0361 Selaginella moellendorffii HOM05D006492 ORTHO05D008432 4.0e-52 211.1 684 26.9
Atru.chr4.1801 Acer truncatum HOM05D006492 ORTHO05D008432 3.8e-50 204.5 191 53.4
Mapoly0061s0085 Marchantia polymorpha HOM05D006492 ORTHO05D008432 5.6e-38 164.1 628 24.4
Lju414A5G29 Lonicera japonica HOM05D006492 ORTHO05D008432 2.1e-37 162.2 146 62.3
AagrBONN_evm.TU.Sc2ySwM_117.2272 Anthoceros agrestis HOM05D006492 ORTHO05D008432 3.2e-25 121.7 455 25.7
CBR_g61877 Chara braunii HOM05D006492 ORTHO05D008432 1.5e-22 112.8 775 23.1
C05p02850 Brassica napus HOM05D006492 ORTHO05D008432 1.8e-20 105.9 135 40.7
C05p02840 Brassica napus HOM05D006492 ORTHO05D008432 2.8e-13 82.0 124 35.5
Migut.N00333 Erythranthe guttata HOM05D006492 ORTHO05D035178 6.9e-12 77.4 53 81.1
BcaC07g36900 Brassica carinata HOM05D006492 ORTHO05D008432 2.9e-10 72.0 73 49.3
Nitab4.5_0005468g0040 Nicotiana tabacum HOM05D001280 ORTHO05D008432 2.5e-09 68.9 107 40.2
PGSC0003DMG400029639 Solanum tuberosum HOM05D006492 ORTHO05D035178 5.7e-06 57.8 51 62.7


User provided reference genes

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