Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.24588 Avicennia marina HOM05D007575 ORTHO05D009611 9.7e-292 1006.1 522 100.0
Migut.N00470 Erythranthe guttata HOM05D007575 ORTHO05D009611 4.1e-173 612.1 525 65.7
SalBow6G5467 Salvia bowleyana HOM05D007575 ORTHO05D009611 8.5e-163 577.8 530 62.5
SGA_v2.0_scaffold406G51053 Striga asiatica HOM05D007575 ORTHO05D009611 4.4e-151 538.9 532 58.6
Oeu050351.1 Olea europaea HOM05D007575 ORTHO05D009611 3.5e-132 476.1 527 54.5
CSS0031716 Camellia sinensis var. sinensis HOM05D007575 ORTHO05D009611 8.9e-120 434.9 582 48.1
CAN.G710.64 Capsicum annuum HOM05D007575 ORTHO05D009611 2.0e-116 423.7 541 48.2
Rhsim09G0032600 Rhododendron simsii HOM05D007575 ORTHO05D009611 1.6e-113 414.1 546 46.9
Cc03_g13380 Coffea canephora HOM05D007575 ORTHO05D009611 8.0e-113 411.8 527 49.1
QL10p045159 Quercus lobata HOM05D007575 ORTHO05D009611 3.4e-111 406.4 549 47.4
Actinidia39859 Actinidia chinensis HOM05D007575 ORTHO05D009611 5.8e-111 405.6 559 45.8
CiPaw.01G103900 Carya illinoinensis HOM05D007575 ORTHO05D009611 7.0e-109 398.7 549 46.4
Cfa015783 Carpinus fangiana HOM05D007575 ORTHO05D009611 9.2e-109 398.3 548 44.9
GSVIVG01013567001 Vitis vinifera HOM05D007575 ORTHO05D009611 3.9e-107 392.9 548 45.6
unitig_8.g3630 Utricularia gibba HOM05D007575 ORTHO05D009611 1.1e-106 391.3 554 47.1
Haze_00711 Corylus avellana HOM05D007575 ORTHO05D009611 7.3e-106 388.7 548 44.5
Gorai.011G145500 Gossypium raimondii HOM05D007575 ORTHO05D009611 1.8e-104 384.0 548 45.4
Gohir.D10G131800 Gossypium hirsutum HOM05D007575 ORTHO05D009611 3.1e-104 383.3 548 45.4
MD04G1038600 Malus domestica HOM05D007575 ORTHO05D009611 8.9e-104 381.7 550 44.4
Prupe.1G189300 Prunus persica HOM05D007575 ORTHO05D009611 8.9e-104 381.7 558 44.4
Thecc.04G183800 Theobroma cacao HOM05D007575 ORTHO05D009611 3.4e-103 379.8 547 46.3
Manes.11G115700 Manihot esculenta HOM05D007575 ORTHO05D009611 5.8e-103 379.0 549 44.3
Gohir.A10G134800 Gossypium hirsutum HOM05D007575 ORTHO05D009611 7.5e-103 378.6 546 45.8
Sabra07G0100200 Salix brachista HOM05D007575 ORTHO05D009611 7.5e-103 378.6 552 45.5
Potri.017G036600 Populus trichocarpa HOM05D007575 ORTHO05D009611 2.2e-102 377.1 551 45.7
Sopen09g036470 Solanum pennellii HOM05D007575 ORTHO05D009611 3.7e-102 376.3 530 45.5
Duzib151G0056 Durio zibethinus HOM05D007575 ORTHO05D009611 6.4e-102 375.6 542 46.3
Lj6A70T54 Lonicera japonica HOM05D007575 ORTHO05D009611 1.9e-101 374.0 653 40.4
TAR633G2419 Trochodendron aralioides HOM05D007575 ORTHO05D009611 3.2e-101 373.2 545 43.5
Actinidia11312 Actinidia chinensis HOM05D007575 ORTHO05D009611 1.6e-100 370.9 544 43.6
Ciclev10019508m.g Citrus clementina HOM05D007575 ORTHO05D009611 2.3e-99 367.1 579 42.7
THA.LOC104803562 Tarenaya hassleriana HOM05D007575 ORTHO05D009611 3.9e-99 366.3 546 44.0
HanXRQChr02g0057801 Helianthus annuus HOM05D007575 ORTHO05D009611 5.1e-99 365.9 526 44.7
ECA233G3130 Erigeron canadensis HOM05D007575 ORTHO05D009611 8.6e-99 365.2 529 44.8
FAN17G1632 Fragaria x ananassa HOM05D007575 ORTHO05D009611 1.1e-98 364.8 609 40.7
Nn1g09745 Nelumbo nucifera HOM05D007575 ORTHO05D009611 3.3e-98 363.2 569 41.3
RcHm_v2.0_Chr4g0407361 Rosa chinensis HOM05D007575 ORTHO05D009611 5.6e-98 362.5 605 41.5
CANSAT78G0404 Cannabis sativa HOM05D007575 ORTHO05D009611 1.2e-97 361.3 538 42.2
PGR083G2249 Punica granatum HOM05D007575 ORTHO05D009611 6.2e-97 359.0 538 43.3
ClCG08G004240 Citrullus lanatus HOM05D007575 ORTHO05D009611 1.4e-96 357.8 544 43.8
Peaxi162Scf00286g00233 Petunia axillaris HOM05D007575 ORTHO05D009611 1.8e-96 357.5 548 43.8
Aa31LG1G25020 Aethionema arabicum HOM05D007575 ORTHO05D009611 5.2e-96 355.9 532 42.9
CsaV3_6G003720 Cucumis sativus L. HOM05D007575 ORTHO05D009611 3.4e-95 353.2 545 42.4
FvH4_4g11270 Fragaria vesca HOM05D007575 ORTHO05D009611 3.4e-95 353.2 600 40.2
DCAR_027534 Daucus carota HOM05D007575 ORTHO05D009611 7.6e-95 352.1 531 42.0
Eucgr.A00245 Eucalyptus grandis HOM05D007575 ORTHO05D009611 1.7e-94 350.9 547 42.6
Sed0001943 Sechium edule HOM05D007575 ORTHO05D009611 2.2e-94 350.5 546 42.5
MELO3C011621.2 Cucumis melo HOM05D007575 ORTHO05D009611 3.8e-94 349.7 543 42.7
vmacro00586 Vaccinium macrocarpon HOM05D007575 ORTHO05D009611 1.4e-93 347.8 593 40.8
Gorai.009G350900 Gossypium raimondii HOM05D007575 ORTHO05D009611 7.1e-93 345.5 536 43.1
FAN07G0850 Fragaria x ananassa HOM05D007575 ORTHO05D009611 9.2e-93 345.1 602 40.2
Gohir.A05G326900 Gossypium hirsutum HOM05D007575 ORTHO05D009611 4.6e-92 342.8 538 44.1
Gohir.D05G326300 Gossypium hirsutum HOM05D007575 ORTHO05D009611 4.6e-92 342.8 536 42.9
Lsat_1_v5_gn_6_54841 Lactuca sativa HOM05D007575 ORTHO05D009611 6.6e-91 339.0 536 42.2
Atru.chr3.1619 Acer truncatum HOM05D007575 ORTHO05D009611 3.6e-89 333.2 502 44.6
Thhalv10001393m.g Eutrema salsugineum HOM05D007575 ORTHO05D009611 4.8e-89 332.8 537 42.3
Sp4g25330 Schrenkiella parvula HOM05D007575 ORTHO05D009611 8.1e-89 332.0 539 40.4
AL4G41870 Arabidopsis lyrata HOM05D007575 ORTHO05D009611 1.1e-88 331.6 538 40.9
Potri.007G123800 Populus trichocarpa HOM05D007575 ORTHO05D009611 1.2e-87 328.2 473 45.0
Carub.0004s2568 Capsella rubella HOM05D007575 ORTHO05D009611 1.5e-87 327.8 537 39.5
AT2G43210 Arabidopsis thaliana HOM05D007575 ORTHO05D009611 1.3e-86 324.7 539 39.7
FAN22G0659 Fragaria x ananassa HOM05D007575 ORTHO05D009611 4.6e-84 316.2 614 38.8
Sabra17G0024000 Salix brachista HOM05D007575 ORTHO05D009611 9.6e-82 308.5 605 39.2
BraA04t18714Z Brassica rapa HOM05D001811 ORTHO05D001738 1.7e-78 297.7 528 37.7
CDE09G0236 Ceratophyllum demersum HOM05D007575 ORTHO05D009611 8.4e-78 295.4 532 36.3
C04p70190 Brassica napus HOM05D007575 ORTHO05D009611 2.4e-77 293.9 553 37.6
MBI08_g10298_MAGBIO Magnolia biondii HOM05D007575 ORTHO05D009611 1.6e-76 291.2 609 36.1
A04p32490 Brassica napus HOM05D007575 ORTHO05D009611 1.0e-75 288.5 578 37.4
Lj6A61T39 Lonicera japonica HOM05D007575 ORTHO05D009611 5.1e-75 286.2 375 48.0
Nitab4.5_0001049g0060 Nicotiana tabacum HOM05D007575 ORTHO05D009611 6.7e-75 285.8 460 42.6
Os11g0293900 Oryza sativa ssp. japonica HOM05D007575 ORTHO05D009611 4.8e-73 279.6 551 34.8
Nitab4.5_0004962g0010 Nicotiana tabacum HOM05D007575 ORTHO05D009611 6.2e-73 279.3 456 42.5
Solyc09g098550.4 Solanum lycopersicum HOM05D007575 ORTHO05D009611 1.5e-71 274.6 453 42.2
ATR0743G244 Amborella trichopoda HOM05D007575 ORTHO05D009611 7.6e-71 272.3 546 34.6
HPP92_002813 Vanilla planifolia HOM05D007575 ORTHO05D009611 1.0e-70 271.9 534 34.5
HPP92_002869 Vanilla planifolia HOM05D007575 ORTHO05D009611 1.8e-67 261.2 507 34.5
PSO210G6745 Papaver somniferum HOM05D007575 ORTHO05D009611 5.7e-66 256.1 555 33.7
COL.COLO4_24385 Corchorus olitorius HOM05D001792 ORTHO05D001821 2.6e-63 247.3 534 36.5
CARHR138270 Cardamine hirsuta HOM05D007575 ORTHO05D009611 3.2e-61 240.4 462 36.1
BcaNung07370 Brassica carinata HOM05D007575 ORTHO05D009611 3.7e-57 226.9 452 36.5
PSO832G0541 Papaver somniferum HOM05D007575 ORTHO05D009611 5.1e-51 206.5 462 32.5
SalBow5G2148 Salvia bowleyana HOM05D007575 ORTHO05D009611 1.3e-46 191.8 173 60.1
SalBow5G4021 Salvia bowleyana HOM05D007575 ORTHO05D009611 1.3e-46 191.8 173 60.1
Hma1.2p1_1477F.1_g285910 Hydrangea macrophylla HOM05D007575 ORTHO05D009611 1.1e-42 178.7 411 37.5
Pp3c20_2320 Physcomitrium patens HOM05D007575 ORTHO05D009611 4.2e-37 160.2 535 26.4
SEGI_13760 Sequoiadendron giganteum HOM05D007575 ORTHO05D009611 1.0e-35 155.6 397 33.5
Mapoly0164s0007 Marchantia polymorpha HOM05D007575 ORTHO05D009611 4.8e-33 146.7 484 27.1
Zm00001eb198990 Zea mays HOM05D007575 ORTHO05D009611 3.1e-32 144.1 225 37.8
BcaB06g29288 Brassica carinata HOM05D007575 ORTHO05D009611 6.1e-28 129.8 128 51.6
AagrBONN_evm.TU.Sc2ySwM_344.3290 Anthoceros agrestis HOM05D007575 ORTHO05D009611 1.0e-27 129.0 439 29.4
TAR633G1182 Trochodendron aralioides HOM05D007575 ORTHO05D009611 1.0e-27 129.0 173 45.7
Eucgr.A00051 Eucalyptus grandis HOM05D007575 ORTHO05D009611 1.3e-25 122.1 171 45.6
CSS0007449 Camellia sinensis var. sinensis HOM05D007575 ORTHO05D009611 1.7e-25 121.7 355 31.8
Lsat_1_v5_gn_5_138981 Lactuca sativa HOM05D007575 ORTHO05D009611 1.5e-21 108.6 326 31.0
SMO116G0403 Selaginella moellendorffii HOM05D007575 ORTHO05D009611 1.9e-21 108.2 535 23.9
PGSC0003DMG400021612 Solanum tuberosum HOM05D007575 ORTHO05D009611 3.2e-21 107.5 122 50.0
SEGI_03248 Sequoiadendron giganteum HOM05D007575 ORTHO05D009611 5.2e-19 100.1 170 37.6
CBR_g123 Chara braunii HOM05D007575 ORTHO05D009611 3.4e-18 97.4 751 22.6
MBI08_g05086_MAGBIO Magnolia biondii HOM05D007575 ORTHO05D009611 3.5e-07 60.8 52 59.6
MSTRG.12015 Avicennia marina HOM05D002884 ORTHO05D003178 6.6e-06 56.6 70 41.4


User provided reference genes

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