Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.24243 Avicennia marina HOM05D007760 ORTHO05D008337 6.9e-168 594.0 315 100.0
MSTRG.1190 Avicennia marina HOM05D007760 ORTHO05D008337 4.5e-66 255.8 312 53.5
Migut.N03163 Erythranthe guttata HOM05D007760 ORTHO05D008337 3.2e-64 249.6 301 53.5
Migut.C00840 Erythranthe guttata HOM05D007760 ORTHO05D008337 1.2e-55 221.1 322 47.2
SGA_v2.0_scaffold11G05919 Striga asiatica HOM05D007760 ORTHO05D008337 2.1e-52 210.3 308 48.1
SalBow8G4233 Salvia bowleyana HOM05D007760 ORTHO05D008337 6.2e-52 208.8 305 54.1
SalBow7G2592 Salvia bowleyana HOM05D007760 ORTHO05D008337 4.6e-47 192.6 312 47.1
Oeu027538.2 Olea europaea HOM05D007760 ORTHO05D008337 1.5e-42 177.6 324 42.3
Oeu046271.1 Olea europaea HOM05D007760 ORTHO05D008337 6.5e-41 172.2 298 43.6
SGA_v2.0_scaffold47G17496 Striga asiatica HOM05D007760 ORTHO05D008337 2.7e-39 166.8 311 42.1
CSS0044946 Camellia sinensis var. sinensis HOM05D007760 ORTHO05D008337 5.9e-34 149.1 323 40.9
Rhsim06G0021400 Rhododendron simsii HOM05D007760 ORTHO05D008337 2.2e-25 120.6 319 37.9
Dinv39521 Davidia involucrata HOM05D007760 ORTHO05D008337 2.5e-24 117.1 213 45.5
Nitab4.5_0009651g0030 Nicotiana tabacum HOM05D007760 ORTHO05D008337 1.2e-23 114.8 321 36.1
RhsimUnG0065900 Rhododendron simsii HOM05D007760 ORTHO05D008337 3.0e-22 110.2 321 36.4
Peaxi162Scf00438g00084 Petunia axillaris HOM05D021694 ORTHO05D008337 8.8e-22 108.6 297 35.4
RhsimUnG0066000 Rhododendron simsii HOM05D007760 ORTHO05D008337 1.1e-21 108.2 312 37.2
Dinv31848 Davidia involucrata HOM05D007760 ORTHO05D008337 1.3e-20 104.8 317 36.3
Solyc04g081480.3 Solanum lycopersicum HOM05D021694 ORTHO05D008337 6.3e-20 102.4 321 34.3
Sopen04g035090 Solanum pennellii HOM05D021694 ORTHO05D008337 8.2e-20 102.1 318 33.6
Duzib116G0858 Durio zibethinus HOM05D007760 ORTHO05D008337 1.1e-19 101.7 326 31.3
SGA_v2.0_scaffold35G14252 Striga asiatica HOM05D007760 ORTHO05D008337 3.1e-19 100.1 158 39.9
Thecc.08G044900 Theobroma cacao HOM05D007760 ORTHO05D008337 7.7e-18 95.5 329 33.4
TAR381G0719 Trochodendron aralioides HOM05D007760 ORTHO05D008337 1.0e-17 95.1 339 33.0
Manes.18G013300 Manihot esculenta HOM05D007760 ORTHO05D008337 2.9e-17 93.6 315 31.4
Glyma.04G024000 Glycine max HOM05D007760 ORTHO05D008337 5.0e-17 92.8 304 30.3
Phvul.009G017200 Phaseolus vulgaris HOM05D007760 ORTHO05D008337 6.5e-17 92.4 306 30.7
Nitab4.5_0000192g0190 Nicotiana tabacum HOM05D021694 ORTHO05D008337 4.2e-16 89.7 301 32.2
Duzib041G0564 Durio zibethinus HOM05D007760 ORTHO05D008337 5.5e-16 89.4 321 31.8
TAR625G0557 Trochodendron aralioides HOM05D007760 ORTHO05D008337 5.5e-16 89.4 287 32.1
VMungo1309G0539 Vigna mungo HOM05D007760 ORTHO05D008337 9.4e-16 88.6 306 30.1
Rhsim07G0247700 Rhododendron simsii HOM05D007760 ORTHO05D008337 3.6e-15 86.7 182 42.9
Gorai.010G004100 Gossypium raimondii HOM05D007760 ORTHO05D008337 1.8e-14 84.3 298 30.9
SGA_v2.0_scaffold390G50602 Striga asiatica HOM05D007760 ORTHO05D008337 3.0e-14 83.6 131 48.1
Eucgr.F00585 Eucalyptus grandis HOM05D007760 ORTHO05D008337 4.0e-14 83.2 172 36.6
TPR.G20837 Trifolium pratense HOM05D007760 ORTHO05D008337 5.2e-14 82.8 319 29.5
Gohir.A06G003800 Gossypium hirsutum HOM05D007760 ORTHO05D008337 2.6e-13 80.5 284 31.0
Actinidia15424 Actinidia chinensis HOM05D007760 ORTHO05D008337 3.3e-13 80.1 305 32.5
Glyma.06G024200 Glycine max HOM05D007760 ORTHO05D008337 3.3e-13 80.1 302 30.1
Gorai.010G003900 Gossypium raimondii HOM05D007760 ORTHO05D008337 5.7e-13 79.3 297 30.3
MD08G1012900 Malus domestica HOM05D015458 ORTHO05D008337 5.7e-13 79.3 341 26.4
Sabra05G0185300 Salix brachista HOM05D007760 ORTHO05D008337 1.3e-12 78.2 331 30.2
Gohir.A06G003900 Gossypium hirsutum HOM05D007760 ORTHO05D008337 1.7e-12 77.8 296 29.4
Medtr1g025290 Medicago truncatula HOM05D007760 ORTHO05D008337 1.7e-12 77.8 297 29.6
Sc15g0004960 Simmondsia chinensis HOM05D007760 ORTHO05D008337 2.8e-12 77.0 173 38.2
Gorai.010G004000 Gossypium raimondii HOM05D007760 ORTHO05D008337 3.7e-12 76.6 286 29.0
Actinidia37934 Actinidia chinensis HOM05D068263 ORTHO05D008337 4.8e-12 76.3 229 32.8
vmacro22892 Vaccinium macrocarpon HOM05D007760 ORTHO05D008337 4.8e-12 76.3 321 30.2
Gohir.D06G006600 Gossypium hirsutum HOM05D007760 ORTHO05D008337 8.2e-12 75.5 297 29.6
Nitab4.5_0025981g0010 Nicotiana tabacum HOM05D007760 ORTHO05D008337 1.8e-11 74.3 165 40.0
Gohir.A06G003700 Gossypium hirsutum HOM05D007760 ORTHO05D008337 4.1e-11 73.2 297 29.6
CiPaw.08G066600 Carya illinoinensis HOM05D007760 ORTHO05D008337 9.1e-11 72.0 311 30.9
Gohir.D06G006700 Gossypium hirsutum HOM05D007760 ORTHO05D008337 9.1e-11 72.0 286 28.3
Potri.002G021900 Populus trichocarpa HOM05D007760 ORTHO05D008337 1.2e-10 71.6 202 36.6
Hund05187 Selenicereus undatus HOM05D030748 ORTHO05D008337 1.2e-10 71.6 306 29.4
MBI05_g33714_MAGBIO Magnolia biondii HOM05D007760 ORTHO05D008337 2.0e-10 70.9 310 31.0
Potri.005G239800 Populus trichocarpa HOM05D007760 ORTHO05D008337 2.7e-10 70.5 330 28.5
TWI36G1437 Tripterygium wilfordii HOM05D007760 ORTHO05D008337 2.7e-10 70.5 188 38.3
MELO3C011015.2 Cucumis melo HOM05D016278 ORTHO05D008337 3.5e-10 70.1 279 32.3
ClCG08G014270 Citrullus lanatus HOM05D016278 ORTHO05D008337 4.5e-10 69.7 193 32.1
Lalb_Chr23g0266151 Lupinus albus HOM05D007760 ORTHO05D008337 1.3e-09 68.2 290 33.1
Lalb_Chr14g0369911 Lupinus albus HOM05D007760 ORTHO05D008337 3.8e-09 66.6 314 30.6
Ciclev10001832m.g Citrus clementina HOM05D007760 ORTHO05D008337 8.5e-09 65.5 323 30.0
Cfa013954 Carpinus fangiana HOM05D007760 ORTHO05D008337 1.1e-08 65.1 288 28.5
COL.COLO4_26143 Corchorus olitorius HOM05D007760 ORTHO05D008337 1.9e-08 64.3 319 30.1
CiPaw.07G149400 Carya illinoinensis HOM05D007760 ORTHO05D008337 3.2e-08 63.5 159 41.5
Cpa.g.sc26.48 Carica papaya HOM05D007760 ORTHO05D008337 5.5e-08 62.8 175 32.6
Medtr1g025310 Medicago truncatula HOM05D007760 ORTHO05D008337 7.2e-08 62.4 205 30.7
CAN.G311.33 Capsicum annuum HOM05D021694 ORTHO05D008337 2.1e-07 60.8 171 32.2
CsaV3_2G029560 Cucumis sativus L. HOM05D016278 ORTHO05D008337 3.6e-07 60.1 268 29.1
Psat6g002560 Pisum sativum HOM05D007760 ORTHO05D008337 3.6e-07 60.1 256 30.9
Lj4P797T23 Lonicera japonica HOM05D007760 ORTHO05D008337 4.7e-07 59.7 192 31.8
Lalb_Chr11g0061901 Lupinus albus HOM05D007760 ORTHO05D008337 6.1e-07 59.3 255 30.2
Lj1g0003650 Lotus japonicus HOM05D007760 ORTHO05D008337 8.0e-07 58.9 288 26.4
Nn5g29094 Nelumbo nucifera HOM05D007760 ORTHO05D008337 8.0e-07 58.9 307 26.4
arahy.Tifrunner.gnm1.ann1.WD1IN2 Arachis hypogaea HOM05D007760 ORTHO05D008337 1.0e-06 58.5 238 30.7
MD15G1011900 Malus domestica HOM05D015458 ORTHO05D008337 1.0e-06 58.5 290 26.2
Psat6g002760 Pisum sativum HOM05D007760 ORTHO05D008337 1.0e-06 58.5 287 29.6
Actinidia29751 Actinidia chinensis HOM05D068263 ORTHO05D008337 1.8e-06 57.8 280 29.3
Lalb_Chr24g0398711 Lupinus albus HOM05D007760 ORTHO05D008337 2.3e-06 57.4 314 29.0
GSVIVG01009912001 Vitis vinifera HOM05D007760 ORTHO05D008337 2.3e-06 57.4 165 35.8
arahy.Tifrunner.gnm1.ann1.EU98QJ Arachis hypogaea HOM05D007760 ORTHO05D008337 5.2e-06 56.2 319 27.9
Prupe.1G364900 Prunus persica HOM05D015458 ORTHO05D008337 5.2e-06 56.2 191 31.9
QL02p011665 Quercus lobata HOM05D007760 ORTHO05D008337 8.8e-06 55.5 186 33.3
GSVIVG01009892001 Vitis vinifera HOM05D000594 ORTHO05D002521 8.8e-06 55.5 156 33.3


User provided reference genes

Program Settings