Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.24172 Avicennia marina HOM05D006622 ORTHO05D007939 2.0e-153 545.8 293 100.0
CSS0023480 Camellia sinensis var. sinensis HOM05D006622 ORTHO05D007939 2.2e-120 436.0 272 80.9
CSS0048522 Camellia sinensis var. sinensis HOM05D006622 ORTHO05D007939 2.2e-120 436.0 272 80.9
Oeu040412.1 Olea europaea HOM05D006622 ORTHO05D007939 4.7e-118 428.3 274 79.2
Actinidia29467 Actinidia chinensis HOM05D006622 ORTHO05D007939 1.8e-117 426.4 272 79.0
SGA_v2.0_scaffold24G10458 Striga asiatica HOM05D006622 ORTHO05D007939 6.7e-117 424.5 276 79.7
vmacro00835 Vaccinium macrocarpon HOM05D006622 ORTHO05D007939 3.3e-116 422.2 269 80.7
Migut.N03281 Erythranthe guttata HOM05D006622 ORTHO05D007939 5.7e-116 421.4 273 78.4
RhsimUnG0092500 Rhododendron simsii HOM05D006622 ORTHO05D007939 1.1e-114 417.2 269 78.1
Dinv27309 Davidia involucrata HOM05D006622 ORTHO05D007939 1.9e-111 406.4 273 76.2
Cfa016021 Carpinus fangiana HOM05D006622 ORTHO05D007939 3.6e-110 402.1 275 73.1
Potri.002G083300 Populus trichocarpa HOM05D006622 ORTHO05D007939 7.5e-108 394.4 274 74.1
HanXRQChr09g0260611 Helianthus annuus HOM05D006622 ORTHO05D007939 1.7e-107 393.3 277 72.6
Lsat_1_v5_gn_4_135580 Lactuca sativa HOM05D006622 ORTHO05D007939 2.2e-107 392.9 272 74.6
CiPaw.06G031300 Carya illinoinensis HOM05D006622 ORTHO05D007939 9.1e-106 387.5 274 70.8
MD15G1347700 Malus domestica HOM05D006622 ORTHO05D007939 1.6e-105 386.7 276 72.1
PGR044G1562 Punica granatum HOM05D006622 ORTHO05D007939 2.7e-105 386.0 266 72.9
Cc10_g11940 Coffea canephora HOM05D006622 ORTHO05D007939 3.5e-105 385.6 268 73.9
Sabra05G0134700 Salix brachista HOM05D006622 ORTHO05D007939 3.5e-105 385.6 274 71.9
Manes.18G077500 Manihot esculenta HOM05D006622 ORTHO05D007939 4.5e-105 385.2 272 73.5
Thecc.08G125800 Theobroma cacao HOM05D006622 ORTHO05D007939 1.0e-104 384.0 276 70.3
Duzib093G0047 Durio zibethinus HOM05D006622 ORTHO05D007939 1.3e-104 383.6 263 72.6
DCAR_003552 Daucus carota HOM05D006622 ORTHO05D007939 1.7e-104 383.3 275 70.5
TAR628G0332 Trochodendron aralioides HOM05D006622 ORTHO05D007939 8.5e-104 380.9 276 70.7
Prupe.1G495500 Prunus persica HOM05D006622 ORTHO05D007939 1.9e-103 379.8 276 70.7
Potri.005G178200 Populus trichocarpa HOM05D006622 ORTHO05D007939 3.2e-103 379.0 272 71.0
Gohir.D05G270800 Gossypium hirsutum HOM05D006622 ORTHO05D007939 9.4e-103 377.5 276 68.5
Ciclev10001495m.g Citrus clementina HOM05D006622 ORTHO05D007939 1.6e-102 376.7 276 68.8
TWI60G0608 Tripterygium wilfordii HOM05D006622 ORTHO05D007939 1.6e-102 376.7 262 72.9
Eucgr.F04350 Eucalyptus grandis HOM05D006622 ORTHO05D007939 2.1e-102 376.3 271 69.7
PGSC0003DMG400044436 Solanum tuberosum HOM05D006622 ORTHO05D007939 2.7e-102 375.9 280 71.8
PGSC0003DMG402008996 Solanum tuberosum HOM05D006622 ORTHO05D007939 2.7e-102 375.9 280 71.8
Gorai.009G283400 Gossypium raimondii HOM05D006622 ORTHO05D007939 3.6e-102 375.6 276 68.5
CAN.G69.14 Capsicum annuum HOM05D006622 ORTHO05D007939 8.0e-102 374.4 277 71.8
THA.LOC104800197 Tarenaya hassleriana HOM05D006622 ORTHO05D007939 8.0e-102 374.4 272 69.5
QL09p034510 Quercus lobata HOM05D006622 ORTHO05D007939 1.0e-101 374.0 273 67.4
Gohir.A05G268900 Gossypium hirsutum HOM05D006622 ORTHO05D007939 1.4e-101 373.6 276 68.1
FvH4_2g26990 Fragaria vesca HOM05D006622 ORTHO05D007939 1.8e-101 373.2 263 73.0
FAN24G2914 Fragaria x ananassa HOM05D006622 ORTHO05D007939 1.8e-101 373.2 263 73.0
COL.COLO4_20860 Corchorus olitorius HOM05D006622 ORTHO05D007939 2.3e-101 372.9 294 66.7
AL1G34990 Arabidopsis lyrata HOM05D006622 ORTHO05D007939 8.8e-101 370.9 269 71.0
Atru.chr13.1464 Acer truncatum HOM05D006622 ORTHO05D007939 1.2e-100 370.5 264 71.2
AT1G21790 Arabidopsis thaliana HOM05D006622 ORTHO05D007939 1.5e-100 370.2 269 70.6
Solyc01g079770.2 Solanum lycopersicum HOM05D006622 ORTHO05D007939 2.6e-100 369.4 280 70.4
FAN15G0029 Fragaria x ananassa HOM05D006622 ORTHO05D007939 4.4e-100 368.6 263 72.2
TPR.G21062 Trifolium pratense HOM05D006622 ORTHO05D007939 5.7e-100 368.2 271 68.6
Carub.0001s2125 Capsella rubella HOM05D006622 ORTHO05D007939 7.5e-100 367.9 273 69.6
Atru.chr13.1486 Acer truncatum HOM05D006622 ORTHO05D007939 9.8e-100 367.5 265 70.6
Thhalv10008385m.g Eutrema salsugineum HOM05D006622 ORTHO05D007939 9.8e-100 367.5 273 70.0
Hund26807 Selenicereus undatus HOM05D006622 ORTHO05D007939 9.8e-100 367.5 267 70.8
Sopen01g031530 Solanum pennellii HOM05D006622 ORTHO05D007939 2.2e-99 366.3 280 70.4
ECA232G1829 Erigeron canadensis HOM05D006622 ORTHO05D007939 2.8e-99 365.9 273 69.2
Aa31LG7G5770 Aethionema arabicum HOM05D006622 ORTHO05D007939 3.7e-99 365.5 267 70.4
RcHm_v2.0_Chr6g0295871 Rosa chinensis HOM05D006622 ORTHO05D007939 3.7e-99 365.5 276 69.2
MELO3C010612.2 Cucumis melo HOM05D006622 ORTHO05D007939 4.8e-99 365.2 275 68.4
Aqoxy5G02345 Aquilegia oxysepala HOM05D006622 ORTHO05D007939 6.3e-99 364.8 274 68.2
EL10Ac1g01019 Beta vulgaris HOM05D006622 ORTHO05D007939 6.3e-99 364.8 275 66.9
GSVIVG01008863001 Vitis vinifera HOM05D006622 ORTHO05D007939 8.3e-99 364.4 256 72.3
BcaB07g32178 Brassica carinata HOM05D006622 ORTHO05D007939 4.1e-98 362.1 275 69.1
BolC5t30779H Brassica oleracea HOM05D006622 ORTHO05D007939 4.1e-98 362.1 265 71.3
BcaC05g26102 Brassica carinata HOM05D006622 ORTHO05D007939 7.0e-98 361.3 265 71.3
CARHR022170 Cardamine hirsuta HOM05D006622 ORTHO05D007939 9.1e-98 360.9 265 70.9
Haze_00437 Corylus avellana HOM05D006622 ORTHO05D007939 9.1e-98 360.9 344 57.3
CsaV3_6G034460 Cucumis sativus L. HOM05D006622 ORTHO05D007939 9.1e-98 360.9 275 68.0
C05p20800 Brassica napus HOM05D006622 ORTHO05D007939 2.0e-97 359.8 265 70.9
Lj1g0017707 Lotus japonicus HOM05D006622 ORTHO05D007939 4.5e-97 358.6 271 67.5
A06p17900 Brassica napus HOM05D006622 ORTHO05D007939 1.0e-96 357.5 261 70.5
BraA06t24880Z Brassica rapa HOM05D006622 ORTHO05D007939 1.0e-96 357.5 261 70.5
ATR0584G160 Amborella trichopoda HOM05D006622 ORTHO05D007939 2.5e-95 352.8 262 67.6
arahy.Tifrunner.gnm1.ann1.29UIE3 Arachis hypogaea HOM05D006622 ORTHO05D007939 1.2e-94 350.5 277 64.6
Lalb_Chr11g0065931 Lupinus albus HOM05D006622 ORTHO05D007939 1.2e-94 350.5 274 65.3
Medtr3g088060 Medicago truncatula HOM05D006622 ORTHO05D007939 3.6e-94 349.0 268 65.3
arahy.Tifrunner.gnm1.ann1.9BP3HC Arachis hypogaea HOM05D006622 ORTHO05D007939 4.7e-94 348.6 277 64.3
Ca_16559_v3 Cicer arietinum L. HOM05D006622 ORTHO05D007939 4.7e-94 348.6 279 65.6
Zm00001eb366620 Zea mays HOM05D006622 ORTHO05D007939 6.1e-94 348.2 260 67.3
Zm00001eb146520 Zea mays HOM05D006622 ORTHO05D007939 1.4e-93 347.1 260 67.7
Nitab4.5_0000630g0130 Nicotiana tabacum HOM05D006622 ORTHO05D007939 6.8e-93 344.7 276 68.1
VMungo1309G2133 Vigna mungo HOM05D006622 ORTHO05D007939 1.5e-92 343.6 276 65.2
Glyma.06G113400 Glycine max HOM05D006622 ORTHO05D007939 2.0e-92 343.2 274 65.3
HPP92_013761 Vanilla planifolia HOM05D006622 ORTHO05D007939 7.5e-92 341.3 259 65.3
Phvul.009G125300 Phaseolus vulgaris HOM05D006622 ORTHO05D007939 8.3e-91 337.8 269 65.8
Glyma.04G249500 Glycine max HOM05D006622 ORTHO05D007939 1.1e-90 337.4 275 62.9
PSO017G0487 Papaver somniferum HOM05D006622 ORTHO05D007939 1.1e-90 337.4 265 67.9
PSO478G0228 Papaver somniferum HOM05D006622 ORTHO05D007939 3.1e-90 335.9 265 68.7
Os01g0869600 Oryza sativa ssp. japonica HOM05D006622 ORTHO05D007939 4.1e-90 335.5 260 66.2
CANSAT35G1811 Cannabis sativa HOM05D006622 ORTHO05D007939 5.6e-87 325.1 276 67.0
CANSAT35G0359 Cannabis sativa HOM05D006622 ORTHO05D007939 2.1e-86 323.2 276 67.4
Sc15g0002770 Simmondsia chinensis HOM05D006622 ORTHO05D007939 3.7e-83 312.4 263 61.2
AUR62014332 Chenopodium quinoa HOM05D006622 ORTHO05D007939 4.6e-81 305.4 270 60.4
Oeu040413.1 Olea europaea HOM05D006622 ORTHO05D007939 6.4e-75 285.0 174 82.2
AUR62019075 Chenopodium quinoa HOM05D006622 ORTHO05D007939 1.4e-74 283.9 195 72.8
Sed0026599 Sechium edule HOM05D006622 ORTHO05D007939 8.6e-72 274.6 174 78.2
MD08G1162300 Malus domestica HOM05D006622 ORTHO05D007939 6.4e-67 258.5 178 70.8
Peaxi162Scf01270g00111 Petunia axillaris HOM05D006622 ORTHO05D007939 1.4e-66 257.3 269 53.9
FAN20G1317 Fragaria x ananassa HOM05D006622 ORTHO05D007939 7.1e-66 255.0 173 74.6
Cpa.g.sc64.93 Carica papaya HOM05D006622 ORTHO05D007939 1.2e-60 237.7 170 71.2
ClCG08G005670 Citrullus lanatus HOM05D006622 ORTHO05D007939 1.3e-59 234.2 169 68.6
Mapoly0055s0084 Marchantia polymorpha HOM05D006622 ORTHO05D007939 4.6e-57 225.7 272 46.3
SMO351G0129 Selaginella moellendorffii HOM05D006622 ORTHO05D007939 3.9e-56 222.6 282 45.4
Sp1g19350 Schrenkiella parvula HOM05D006622 ORTHO05D007939 6.2e-54 215.3 135 77.0
Psat5g087320 Pisum sativum HOM05D006622 ORTHO05D007939 9.9e-52 208.0 174 61.5
CDE08G0135 Ceratophyllum demersum HOM05D006622 ORTHO05D007939 2.4e-50 203.4 265 47.9
CDE06G0548 Ceratophyllum demersum HOM05D006622 ORTHO05D007939 4.6e-49 199.1 158 66.5
Pp3c12_11900 Physcomitrium patens HOM05D006622 ORTHO05D007939 1.0e-48 198.0 272 45.2
Nitab4.5_0000968g0040 Nicotiana tabacum HOM05D006622 ORTHO05D007939 6.4e-43 178.7 277 43.7
AagrBONN_evm.TU.Sc2ySwM_117.1000 Anthoceros agrestis HOM05D006622 ORTHO05D007939 9.3e-42 174.9 216 46.3
Nn5g28301 Nelumbo nucifera HOM05D006622 ORTHO05D007939 1.8e-40 170.6 276 40.6
PGSC0003DMG400007898 Solanum tuberosum HOM05D006622 ORTHO05D007939 1.6e-38 164.1 134 64.2
Actinidia03468 Actinidia chinensis HOM05D006622 ORTHO05D007939 3.1e-29 133.3 269 36.1
Lj7C341T13 Lonicera japonica HOM05D006622 ORTHO05D007939 1.4e-26 124.4 92 65.2
Aa31LG4G7650 Aethionema arabicum HOM05D006622 ORTHO05D007939 1.8e-24 117.5 78 75.6
Lj7C341T14 Lonicera japonica HOM05D006622 ORTHO05D007939 2.3e-24 117.1 81 70.4
CBR_g40088 Chara braunii HOM05D006622 ORTHO05D007939 2.5e-23 113.6 160 43.1
AagrBONN_evm.TU.Sc2ySwM_117.972 Anthoceros agrestis HOM05D006622 ORTHO05D007939 3.2e-18 96.7 173 40.5
Prupe.1G512700 Prunus persica HOM05D006622 ORTHO05D007939 9.4e-18 95.1 78 61.5
Aa31LG4G7660 Aethionema arabicum HOM05D006622 ORTHO05D007939 1.1e-15 88.2 65 64.6
AagrBONN_evm.TU.Sc2ySwM_117.993 Anthoceros agrestis HOM05D006622 ORTHO05D007939 1.4e-13 81.3 130 41.5
unitig_748.g7104 Utricularia gibba HOM05D006622 ORTHO05D007939 1.8e-13 80.9 78 51.3
HPP92_013753 Vanilla planifolia HOM05D006622 ORTHO05D007939 6.9e-13 79.0 62 66.1


User provided reference genes

Program Settings