Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.24154 Avicennia marina HOM05D005913 ORTHO05D007138 1.1e-147 526.6 267 100.0
SGA_v2.0_scaffold25G11107 Striga asiatica HOM05D005913 ORTHO05D007138 9.2e-105 384.0 266 74.4
Oeu008301.1 Olea europaea HOM05D005913 ORTHO05D007138 4.6e-104 381.7 264 71.2
Migut.N03298 Erythranthe guttata HOM05D005913 ORTHO05D007138 7.3e-102 374.4 266 72.2
CSS0006724 Camellia sinensis var. sinensis HOM05D005913 ORTHO05D007138 3.3e-94 349.0 270 68.9
Peaxi162Scf00228g00514 Petunia axillaris HOM05D000044 ORTHO05D007138 1.5e-91 340.1 264 67.0
CAN.G324.3 Capsicum annuum HOM05D005913 ORTHO05D007138 1.3e-90 337.0 267 64.8
Hma1.2p1_1287F.1_g273300 Hydrangea macrophylla HOM05D005913 ORTHO05D007138 2.9e-90 335.9 272 65.4
PGSC0003DMG402011001 Solanum tuberosum HOM05D005913 ORTHO05D007138 1.1e-89 334.0 266 65.8
CSS0022052 Camellia sinensis var. sinensis HOM05D005913 ORTHO05D007138 3.2e-89 332.4 232 73.3
Sopen10g034140 Solanum pennellii HOM05D005913 ORTHO05D007138 4.1e-89 332.0 266 65.0
PGSC0003DMG400016288 Solanum tuberosum HOM05D005913 ORTHO05D007138 5.4e-89 331.6 266 65.0
Nitab4.5_0000037g0040 Nicotiana tabacum HOM05D005913 ORTHO05D007138 7.1e-89 331.3 235 70.6
Rhsim01G0236700 Rhododendron simsii HOM05D005913 ORTHO05D007138 1.6e-88 330.1 267 64.0
Solyc10g084700.2 Solanum lycopersicum HOM05D005913 ORTHO05D007138 3.5e-88 328.9 266 64.7
TAR633G1775 Trochodendron aralioides HOM05D005913 ORTHO05D007138 6.6e-87 324.7 259 65.3
Dinv28648 Davidia involucrata HOM05D005913 ORTHO05D007138 1.1e-86 323.9 267 62.2
Sc21g0006400 Simmondsia chinensis HOM05D005913 ORTHO05D007138 6.8e-84 314.7 267 63.3
Sc21g0006380 Simmondsia chinensis HOM05D005913 ORTHO05D007138 3.4e-83 312.4 267 63.3
Dinv25093 Davidia involucrata HOM05D005913 ORTHO05D007138 6.4e-82 308.1 256 64.8
QL05p072708 Quercus lobata HOM05D005913 ORTHO05D007138 1.9e-81 306.6 264 61.7
GSVIVG01024730001 Vitis vinifera HOM05D005913 ORTHO05D007138 5.4e-81 305.1 255 64.7
vmacro14595 Vaccinium macrocarpon HOM05D005913 ORTHO05D007138 6.0e-80 301.6 234 66.7
CiPaw.13G076700 Carya illinoinensis HOM05D005913 ORTHO05D007138 3.9e-79 298.9 271 60.1
TWI31G0765 Tripterygium wilfordii HOM05D005913 ORTHO05D007138 1.1e-78 297.4 271 58.7
Nn2g15825 Nelumbo nucifera HOM05D005913 ORTHO05D007138 1.5e-78 297.0 261 63.6
Peaxi162Scf00384g00045 Petunia axillaris HOM05D005913 ORTHO05D007138 3.3e-78 295.8 256 61.7
ECA247G1367 Erigeron canadensis HOM05D005913 ORTHO05D007138 1.8e-76 290.0 265 58.9
Lsat_1_v5_gn_9_20000 Lactuca sativa HOM05D005913 ORTHO05D007138 3.1e-76 289.3 264 57.6
Thecc.09G300200 Theobroma cacao HOM05D005913 ORTHO05D007138 2.0e-75 286.6 267 59.6
Duzib150G0854 Durio zibethinus HOM05D005913 ORTHO05D007138 4.4e-75 285.4 266 59.0
TAR369G0609 Trochodendron aralioides HOM05D005913 ORTHO05D007138 2.2e-74 283.1 243 62.1
MD11G1073200 Malus domestica HOM05D005913 ORTHO05D007138 2.9e-74 282.7 271 60.5
Eucgr.J01039 Eucalyptus grandis HOM05D005913 ORTHO05D007138 1.9e-73 280.0 256 60.9
HanXRQChr16g0518331 Helianthus annuus HOM05D005913 ORTHO05D007138 7.1e-73 278.1 262 57.6
Gohir.D13G228900 Gossypium hirsutum HOM05D005913 ORTHO05D007138 1.2e-72 277.3 271 59.0
Gorai.013G259900 Gossypium raimondii HOM05D005913 ORTHO05D007138 1.2e-72 277.3 271 59.4
CANSAT56G2716 Cannabis sativa HOM05D005913 ORTHO05D007138 1.7e-71 273.5 259 57.5
Prupe.6G056500 Prunus persica HOM05D005913 ORTHO05D007138 1.7e-71 273.5 261 59.4
FAN11G0587 Fragaria x ananassa HOM05D005913 ORTHO05D007138 8.7e-71 271.2 271 57.9
Cfa011705 Carpinus fangiana HOM05D005913 ORTHO05D007138 1.1e-70 270.8 273 55.3
RcHm_v2.0_Chr5g0069871 Rosa chinensis HOM05D005913 ORTHO05D007138 1.5e-70 270.4 269 58.4
FvH4_3g38720 Fragaria vesca HOM05D005913 ORTHO05D007138 3.3e-70 269.2 271 57.6
Hund09257 Selenicereus undatus HOM05D005913 ORTHO05D007138 1.3e-69 267.3 249 60.2
Cc01_g14290 Coffea canephora HOM05D005913 ORTHO05D007138 1.6e-69 266.9 207 66.7
Sed0020527 Sechium edule HOM05D005913 ORTHO05D007138 2.1e-69 266.5 267 54.7
FAN25G2063 Fragaria x ananassa HOM05D005913 ORTHO05D007138 2.8e-69 266.2 271 57.2
Lj3A585T46 Lonicera japonica HOM05D005913 ORTHO05D007138 2.8e-69 266.2 222 64.0
Gohir.A13G224200 Gossypium hirsutum HOM05D005913 ORTHO05D007138 4.8e-69 265.4 270 56.3
Lalb_Chr19g0128221 Lupinus albus HOM05D005913 ORTHO05D007138 4.8e-69 265.4 266 55.6
FAN21G0630 Fragaria x ananassa HOM05D005913 ORTHO05D007138 8.1e-69 264.6 271 57.2
DCAR_002129 Daucus carota HOM05D005913 ORTHO05D007138 2.4e-68 263.1 282 55.3
CsaV3_6G016190 Cucumis sativus L. HOM05D005913 ORTHO05D007138 1.2e-67 260.8 270 52.6
AUR62020144 Chenopodium quinoa HOM05D005913 ORTHO05D007138 1.5e-67 260.4 267 54.7
AUR62001638 Chenopodium quinoa HOM05D005913 ORTHO05D007138 2.6e-67 259.6 267 53.9
VMungo0647G0764 Vigna mungo HOM05D005913 ORTHO05D007138 5.8e-67 258.5 269 54.6
Haze_24336 Corylus avellana HOM05D005913 ORTHO05D007138 2.9e-66 256.1 259 56.0
MELO3C025845.2 Cucumis melo HOM05D005913 ORTHO05D007138 1.1e-65 254.2 290 51.0
Psat3g002480 Pisum sativum HOM05D005913 ORTHO05D007138 1.9e-65 253.4 262 53.1
Sabra06G0131300 Salix brachista HOM05D005913 ORTHO05D007138 1.9e-65 253.4 240 60.4
Ciclev10029073m.g Citrus clementina HOM05D005913 ORTHO05D007138 2.4e-65 253.1 259 55.2
Manes.10G106300 Manihot esculenta HOM05D005913 ORTHO05D007138 2.4e-65 253.1 261 54.8
DCAR_012499 Daucus carota HOM05D005913 ORTHO05D007138 5.5e-65 251.9 245 58.8
Cpa.g.sc112.8 Carica papaya HOM05D005913 ORTHO05D007138 7.1e-65 251.5 275 53.8
SalBow6G3913 Salvia bowleyana HOM05D005913 ORTHO05D007138 7.1e-65 251.5 355 45.4
Glyma.05G235600 Glycine max HOM05D005913 ORTHO05D007138 9.3e-65 251.1 269 53.9
Actinidia16099 Actinidia chinensis HOM05D005913 ORTHO05D007138 1.2e-64 250.8 211 61.6
Ca_09509_v3 Cicer arietinum L. HOM05D000390 ORTHO05D007138 1.2e-64 250.8 262 53.4
Ca_30058_v3 Cicer arietinum L. HOM05D000390 ORTHO05D007138 1.2e-64 250.8 262 53.4
FAN16G2194 Fragaria x ananassa HOM05D005913 ORTHO05D007138 2.1e-64 250.0 272 55.9
Medtr7g117410 Medicago truncatula HOM05D005913 ORTHO05D007138 4.6e-64 248.8 244 57.0
Potri.006G170500 Populus trichocarpa HOM05D005913 ORTHO05D007138 1.8e-63 246.9 256 57.4
PSO675G7356 Papaver somniferum HOM05D005913 ORTHO05D007138 1.1e-62 244.2 258 56.6
QL01p038500 Quercus lobata HOM05D005913 ORTHO05D007138 1.1e-62 244.2 219 60.3
PGR044G1475 Punica granatum HOM05D005913 ORTHO05D007138 5.6e-62 241.9 217 59.0
EL10Ac7g16180 Beta vulgaris HOM05D005913 ORTHO05D007138 7.4e-62 241.5 267 51.3
arahy.Tifrunner.gnm1.ann1.6RYY2X Arachis hypogaea HOM05D005913 ORTHO05D007138 1.3e-61 240.7 255 54.1
LjContig00155g0009730 Lotus japonicus HOM05D005913 ORTHO05D007138 2.1e-61 240.0 253 51.0
PSO339G4526 Papaver somniferum HOM05D005913 ORTHO05D007138 3.7e-61 239.2 258 55.4
ATR0681G105 Amborella trichopoda HOM05D005913 ORTHO05D007138 6.2e-61 238.4 216 59.3
Aqoxy4G02545 Aquilegia oxysepala HOM05D005913 ORTHO05D007138 6.2e-61 238.4 271 52.8
PSO801G0017 Papaver somniferum HOM05D005913 ORTHO05D007138 6.2e-61 238.4 256 55.1
CDE04G2145 Ceratophyllum demersum HOM05D005913 ORTHO05D007138 1.0e-58 231.1 213 61.0
Phvul.001G033300 Phaseolus vulgaris HOM05D005913 ORTHO05D007138 4.9e-58 228.8 294 47.6
COL.COLO4_19170 Corchorus olitorius HOM05D005913 ORTHO05D001548 6.5e-58 228.4 247 54.3
HPP92_028632 Vanilla planifolia HOM05D005913 ORTHO05D007138 3.9e-55 219.2 230 55.2
CDE04G2770 Ceratophyllum demersum HOM05D005913 ORTHO05D007138 6.3e-53 211.8 212 58.5
Lj4A493T9 Lonicera japonica HOM05D005913 ORTHO05D007138 4.1e-52 209.1 229 52.8
Thhalv10008508m.g Eutrema salsugineum HOM05D005913 ORTHO05D007138 5.3e-52 208.8 260 50.0
Ah.15g099480 Amaranthus hybridus HOM05D005913 ORTHO05D007138 1.3e-50 204.1 253 48.2
A10p05770 Brassica napus HOM05D005913 ORTHO05D007138 3.5e-48 196.1 271 46.9
BraA10t42838Z Brassica rapa HOM05D005913 ORTHO05D007138 3.5e-48 196.1 271 46.9
HPP92_002930 Vanilla planifolia HOM05D005913 ORTHO05D007138 3.5e-48 196.1 219 52.5
Sp1g05970 Schrenkiella parvula HOM05D005913 ORTHO05D007138 3.9e-47 192.6 258 46.5
Os10g0500500 Oryza sativa ssp. japonica HOM05D005913 ORTHO05D007138 5.1e-47 192.2 206 53.9
C08p50760 Brassica napus HOM05D005913 ORTHO05D007138 6.7e-47 191.8 263 46.0
BolC5t29300H Brassica oleracea HOM05D005913 ORTHO05D007138 6.7e-47 191.8 245 50.6
CARHR006930 Cardamine hirsuta HOM05D005913 ORTHO05D007138 6.7e-47 191.8 256 45.7
unitig_26.g9973 Utricularia gibba HOM05D005913 ORTHO05D007138 8.7e-47 191.4 118 81.4
C05p05290 Brassica napus HOM05D005913 ORTHO05D007138 1.1e-46 191.0 245 50.6
BcaC07g42020 Brassica carinata HOM05D005913 ORTHO05D007138 3.3e-46 189.5 263 45.6
Zm00001eb012770 Zea mays HOM05D005913 ORTHO05D007138 3.3e-46 189.5 248 45.6
Aa31LG1G6450 Aethionema arabicum HOM05D005913 ORTHO05D007138 7.4e-46 188.3 232 49.6
BolC8t52604H Brassica oleracea HOM05D005913 ORTHO05D007138 9.7e-46 188.0 262 45.8
BraA09t41996Z Brassica rapa HOM05D005913 ORTHO05D007138 9.7e-46 188.0 262 46.2
A09p66580 Brassica napus HOM05D005913 ORTHO05D007138 4.8e-45 185.7 223 49.8
Carub.0001s0651 Capsella rubella HOM05D005913 ORTHO05D007138 4.1e-44 182.6 260 45.0
AT1G07210 Arabidopsis thaliana HOM05D005913 ORTHO05D007138 3.4e-43 179.5 261 46.0
AL1G17350 Arabidopsis lyrata HOM05D005913 ORTHO05D007138 5.9e-43 178.7 261 46.0
Zm00001eb142300 Zea mays HOM05D005913 ORTHO05D007138 3.8e-42 176.0 155 58.7
BcaC07g42452 Brassica carinata HOM05D005913 ORTHO05D007138 1.2e-40 171.0 168 56.0
TPR.G37238 Trifolium pratense HOM05D005913 ORTHO05D007138 2.8e-37 159.8 204 48.0
MD03G1068700 Malus domestica HOM05D005913 ORTHO05D007138 1.4e-33 147.5 99 75.8
BcaC07g42451 Brassica carinata HOM05D005913 ORTHO05D007138 5.1e-31 139.0 95 71.6
BcaB07g33371 Brassica carinata HOM05D005913 ORTHO05D007138 2.6e-30 136.7 164 45.1
Atru.chr3.4201 Acer truncatum HOM05D005913 ORTHO05D007138 2.2e-26 123.6 178 44.4
TPR.G4738 Trifolium pratense HOM05D005913 ORTHO05D007138 1.5e-25 120.9 162 43.2
TPR.G3936 Trifolium pratense HOM05D005913 ORTHO05D007138 4.2e-25 119.4 80 75.0
arahy.Tifrunner.gnm1.ann1.6CR394 Arachis hypogaea HOM05D005913 ORTHO05D007138 1.2e-24 117.9 71 83.1
MD03G1068600 Malus domestica HOM05D005913 ORTHO05D007138 1.6e-24 117.5 122 54.9
SEGI_23907 Sequoiadendron giganteum HOM05D005913 ORTHO05D007138 1.8e-23 114.0 165 49.1
Pp3c9_1670 Physcomitrium patens HOM05D005913 ORTHO05D007138 6.7e-23 112.1 127 48.0
ClCG02G019520 Citrullus lanatus HOM05D005913 ORTHO05D007138 3.7e-21 106.3 179 38.0
Mapoly0046s0093 Marchantia polymorpha HOM05D005913 ORTHO05D007138 1.4e-20 104.4 208 37.0
Atru.chr3.4202 Acer truncatum HOM05D005913 ORTHO05D007138 1.9e-17 94.0 65 75.4
SEGI_13957 Sequoiadendron giganteum HOM05D005913 ORTHO05D007138 4.2e-17 92.8 70 62.9
Solyc01g058530.4 Solanum lycopersicum HOM05D005913 ORTHO05D007138 2.7e-16 90.1 62 67.7
AagrBONN_evm.TU.Sc2ySwM_362.942 Anthoceros agrestis HOM05D005913 ORTHO05D007138 8.0e-16 88.6 215 31.6
Peaxi162Scf00378g00212 Petunia axillaris HOM05D000011 ORTHO05D010520 1.0e-15 88.2 56 78.6
SHI19145 Sapria himalayana HOM05D000002 ORTHO05D000001 1.5e-09 67.8 130 36.9
CBR_g41534 Chara braunii HOM05D005913 ORTHO05D007138 1.9e-09 67.4 77 45.5
TPR.G39004 Trifolium pratense HOM05D006629 ORTHO05D008430 3.2e-09 66.6 141 36.2


User provided reference genes

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