Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.23979 Avicennia marina HOM05D005581 ORTHO05D006792 6.1e-140 500.7 241 100.0
Migut.H00163 Erythranthe guttata HOM05D005581 ORTHO05D006792 6.8e-91 337.8 207 77.8
Oeu031508.1 Olea europaea HOM05D005581 ORTHO05D006792 8.9e-91 337.4 204 76.0
Oeu062376.1 Olea europaea HOM05D005581 ORTHO05D006792 7.5e-90 334.3 204 78.4
SalBow1G8695 Salvia bowleyana HOM05D005581 ORTHO05D006792 1.1e-85 320.5 209 71.8
SGA_v2.0_scaffold135G34832 Striga asiatica HOM05D005581 ORTHO05D006792 1.1e-85 320.5 209 71.3
Peaxi162Scf00129g00828 Petunia axillaris HOM05D000793 ORTHO05D000783 3.3e-85 318.9 195 76.4
Hma1.2p1_1975F.1_g309690 Hydrangea macrophylla HOM05D005581 ORTHO05D006792 7.3e-85 317.8 199 76.4
PGSC0003DMG400001392 Solanum tuberosum HOM05D005581 ORTHO05D006792 9.5e-85 317.4 193 75.1
Dinv33676 Davidia involucrata HOM05D005581 ORTHO05D006792 1.2e-84 317.0 217 68.7
Nitab4.5_0007185g0080 Nicotiana tabacum HOM05D005581 ORTHO05D006792 1.2e-84 317.0 203 73.9
Sopen02g032000 Solanum pennellii HOM05D005581 ORTHO05D006792 3.6e-84 315.5 192 75.5
Solyc02g087250.4 Solanum lycopersicum HOM05D000793 ORTHO05D000783 1.1e-83 313.9 187 75.9
Nitab4.5_0004905g0030 Nicotiana tabacum HOM05D000793 ORTHO05D006792 1.8e-83 313.2 197 74.6
CAN.G206.63 Capsicum annuum HOM05D005581 ORTHO05D006792 2.3e-83 312.8 194 74.7
GSVIVG01032543001 Vitis vinifera HOM05D005581 ORTHO05D006792 2.9e-81 305.8 201 72.6
Actinidia36059 Actinidia chinensis HOM05D005581 ORTHO05D006792 4.9e-81 305.1 206 71.8
Potri.001G470300 Populus trichocarpa HOM05D005581 ORTHO05D006792 4.9e-81 305.1 190 76.8
DCAR_003657 Daucus carota HOM05D005581 ORTHO05D006792 3.2e-80 302.4 196 71.4
Actinidia06044 Actinidia chinensis HOM05D005581 ORTHO05D006792 7.1e-80 301.2 204 72.1
Sabra16G0319200 Salix brachista HOM05D005581 ORTHO05D006792 4.6e-79 298.5 190 75.3
RhsimUnG0168100 Rhododendron simsii HOM05D005581 ORTHO05D006792 7.8e-79 297.7 174 79.3
TAR629G0716 Trochodendron aralioides HOM05D005581 ORTHO05D006792 7.8e-79 297.7 211 65.9
Manes.15G178800 Manihot esculenta HOM05D005581 ORTHO05D006792 3.0e-78 295.8 205 69.8
CSS0034562 Camellia sinensis var. sinensis HOM05D005581 ORTHO05D006792 1.9e-77 293.1 175 76.6
CSS0041908 Camellia sinensis var. sinensis HOM05D005581 ORTHO05D006792 1.9e-77 293.1 175 76.6
Thecc.04G002800 Theobroma cacao HOM05D005581 ORTHO05D006792 1.9e-77 293.1 208 69.2
Eucgr.J02171 Eucalyptus grandis HOM05D005581 ORTHO05D006792 9.6e-77 290.8 202 69.3
Ciclev10016724m.g Citrus clementina HOM05D005581 ORTHO05D006792 2.8e-76 289.3 194 70.6
Prupe.3G278300 Prunus persica HOM05D005581 ORTHO05D006792 3.6e-76 288.9 211 66.8
PGR083G1021 Punica granatum HOM05D005581 ORTHO05D006792 3.6e-76 288.9 201 69.7
COL.COLO4_06153 Corchorus olitorius HOM05D000793 ORTHO05D000783 8.1e-76 287.7 207 66.7
ECA240G2828 Erigeron canadensis HOM05D005581 ORTHO05D006792 2.4e-75 286.2 193 72.0
Lsat_1_v5_gn_0_16520 Lactuca sativa HOM05D005581 ORTHO05D006792 2.4e-75 286.2 234 61.1
CiPaw.04G022300 Carya illinoinensis HOM05D005581 ORTHO05D006792 3.1e-75 285.8 214 65.0
Ciclev10012718m.g Citrus clementina HOM05D005581 ORTHO05D006792 5.2e-75 285.0 206 66.0
Lalb_Chr05g0228941 Lupinus albus HOM05D005581 ORTHO05D006792 5.2e-75 285.0 194 69.1
RcHm_v2.0_Chr2g0170291 Rosa chinensis HOM05D005581 ORTHO05D006792 5.2e-75 285.0 211 65.4
Duzib187G0556 Durio zibethinus HOM05D005581 ORTHO05D006792 6.8e-75 284.6 204 68.1
Duzib147G0516 Durio zibethinus HOM05D005581 ORTHO05D006792 1.2e-74 283.9 207 67.6
Cfa007475 Carpinus fangiana HOM05D005581 ORTHO05D006792 1.5e-74 283.5 191 70.7
Hma1.2p1_0375F.1_g139010 Hydrangea macrophylla HOM05D005581 ORTHO05D006792 1.5e-74 283.5 180 71.1
QL02p078462 Quercus lobata HOM05D005581 ORTHO05D006792 1.5e-74 283.5 206 68.4
Sc06g0002610 Simmondsia chinensis HOM05D005581 ORTHO05D006792 2.0e-74 283.1 174 73.6
TWI12G0742 Tripterygium wilfordii HOM05D005581 ORTHO05D006792 4.4e-74 282.0 191 71.7
Hund12510 Selenicereus undatus HOM05D005581 ORTHO05D006792 7.6e-74 281.2 178 74.2
Medtr7g030020 Medicago truncatula HOM05D005581 ORTHO05D006792 9.9e-74 280.8 185 69.7
Medtr7g038730 Medicago truncatula HOM05D005581 ORTHO05D006792 9.9e-74 280.8 185 69.7
Glyma.13G116200 Glycine max HOM05D005581 ORTHO05D006792 2.2e-73 279.6 191 68.1
EL10Ac7g18001 Beta vulgaris HOM05D005581 ORTHO05D006792 2.9e-73 279.3 224 63.4
Gohir.A05G361700 Gossypium hirsutum HOM05D005581 ORTHO05D006792 3.8e-73 278.9 193 69.9
Gorai.012G059200 Gossypium raimondii HOM05D005581 ORTHO05D006792 3.8e-73 278.9 197 69.5
DCAR_011192 Daucus carota HOM05D005581 ORTHO05D006792 6.4e-73 278.1 207 67.6
Lj2g0014392 Lotus japonicus HOM05D005581 ORTHO05D006792 6.4e-73 278.1 170 74.7
Gohir.D04G052800 Gossypium hirsutum HOM05D005581 ORTHO05D006792 1.4e-72 276.9 197 69.0
VMungo1215G0614 Vigna mungo HOM05D005581 ORTHO05D006792 1.4e-72 276.9 194 66.5
TPR.G39154 Trifolium pratense HOM05D005581 ORTHO05D006792 2.4e-72 276.2 183 69.4
Lj2g0006948 Lotus japonicus HOM05D005581 ORTHO05D006792 3.2e-72 275.8 167 75.4
Nn3g17019 Nelumbo nucifera HOM05D005581 ORTHO05D006792 3.2e-72 275.8 187 68.4
PSO063G2781 Papaver somniferum HOM05D005581 ORTHO05D006792 3.2e-72 275.8 204 65.2
arahy.Tifrunner.gnm1.ann1.E9CGF1 Arachis hypogaea HOM05D005581 ORTHO05D006792 5.4e-72 275.0 183 69.9
MELO3C033644.2 Cucumis melo HOM05D005581 ORTHO05D006792 5.4e-72 275.0 175 71.4
PSO591G0467 Papaver somniferum HOM05D005581 ORTHO05D006792 5.4e-72 275.0 195 67.7
PSO832G0275 Papaver somniferum HOM05D005581 ORTHO05D006792 5.4e-72 275.0 199 66.3
CsaV3_5G037490 Cucumis sativus L. HOM05D005581 ORTHO05D006792 7.1e-72 274.6 185 67.6
Gohir.A07G217500 Gossypium hirsutum HOM05D005581 ORTHO05D006792 1.2e-71 273.9 195 66.2
Sed0016453 Sechium edule HOM05D005581 ORTHO05D006792 1.2e-71 273.9 191 64.9
FvH4_6g50030 Fragaria vesca HOM05D005581 ORTHO05D006792 1.6e-71 273.5 210 64.8
FAN09G0871 Fragaria x ananassa HOM05D005581 ORTHO05D006792 2.1e-71 273.1 205 66.3
MBI15_g35865_MAGBIO Magnolia biondii HOM05D005581 ORTHO05D006792 2.1e-71 273.1 203 65.5
Gohir.D07G224600 Gossypium hirsutum HOM05D005581 ORTHO05D006792 2.7e-71 272.7 195 66.2
FAN14G0942 Fragaria x ananassa HOM05D005581 ORTHO05D006792 3.5e-71 272.3 205 66.3
MD17G1040700 Malus domestica HOM05D005581 ORTHO05D006792 3.5e-71 272.3 218 63.8
arahy.Tifrunner.gnm1.ann1.2M0NJC Arachis hypogaea HOM05D005581 ORTHO05D006792 4.6e-71 271.9 183 69.4
Cpa.g.sc14.80 Carica papaya HOM05D005581 ORTHO05D006792 4.6e-71 271.9 204 65.2
FAN05G2284 Fragaria x ananassa HOM05D005581 ORTHO05D006792 1.0e-70 270.8 211 64.5
Atru.BG.224.p Acer truncatum HOM05D005581 ORTHO05D006792 1.3e-70 270.4 165 76.4
Gorai.001G259000 Gossypium raimondii HOM05D005581 ORTHO05D006792 1.3e-70 270.4 175 70.3
Lalb_Chr21g0319231 Lupinus albus HOM05D005581 ORTHO05D006792 1.3e-70 270.4 182 70.3
Ca_19611_v3 Cicer arietinum L. HOM05D005581 ORTHO05D006792 5.1e-70 268.5 195 67.7
Aqoxy3G03110 Aquilegia oxysepala HOM05D005581 ORTHO05D006792 1.1e-69 267.3 180 68.3
Phvul.003G125600 Phaseolus vulgaris HOM05D005581 ORTHO05D006792 1.5e-69 266.9 193 65.8
arahy.Tifrunner.gnm1.ann1.B679M5 Arachis hypogaea HOM05D005581 ORTHO05D006792 3.3e-69 265.8 176 69.9
ClCG00G001710 Citrullus lanatus HOM05D005581 ORTHO05D006792 4.3e-69 265.4 211 62.6
ClCG09G018630 Citrullus lanatus HOM05D005581 ORTHO05D006792 4.3e-69 265.4 211 62.6
CDE06G0044 Ceratophyllum demersum HOM05D005581 ORTHO05D006792 5.6e-69 265.0 175 67.4
arahy.Tifrunner.gnm1.ann1.UYM2HQ Arachis hypogaea HOM05D005581 ORTHO05D006792 9.6e-69 264.2 176 69.3
AUR62001208 Chenopodium quinoa HOM05D005581 ORTHO05D006792 1.6e-68 263.5 200 66.0
AUR62022121 Chenopodium quinoa HOM05D005581 ORTHO05D006792 4.8e-68 261.9 204 65.2
HPP92_026859 Vanilla planifolia HOM05D005581 ORTHO05D006792 4.8e-68 261.9 168 71.4
SHI25585 Sapria himalayana HOM05D005581 ORTHO05D006792 1.4e-67 260.4 196 64.3
Psat3g165640 Pisum sativum HOM05D005581 ORTHO05D006792 1.8e-67 260.0 172 69.2
ATR0624G029 Amborella trichopoda HOM05D005581 ORTHO05D006792 3.1e-67 259.2 168 70.8
Os06g0238300 Oryza sativa ssp. japonica HOM05D005581 ORTHO05D006792 6.9e-67 258.1 168 68.5
Carub.0003s2629 Capsella rubella HOM05D005581 ORTHO05D006792 3.4e-66 255.8 197 64.0
Zm00001eb279970 Zea mays HOM05D005581 ORTHO05D006792 2.2e-65 253.1 165 67.3
Aqoxy3G03108 Aquilegia oxysepala HOM05D005581 ORTHO05D006792 4.9e-65 251.9 166 68.7
PSO832G2358 Papaver somniferum HOM05D005581 ORTHO05D006792 4.9e-65 251.9 179 64.8
AT2G04690 Arabidopsis thaliana HOM05D005581 ORTHO05D006792 8.4e-65 251.1 181 67.4
Lj7A408G12 Lonicera japonica HOM05D005581 ORTHO05D006792 8.4e-65 251.1 146 77.4
Hund20033 Selenicereus undatus HOM05D005581 ORTHO05D006792 1.9e-64 250.0 187 66.3
AL3G42310 Arabidopsis lyrata HOM05D005581 ORTHO05D006792 2.4e-64 249.6 177 68.4
CARHR102620 Cardamine hirsuta HOM05D005581 ORTHO05D006792 2.4e-64 249.6 190 64.2
TWI12G0286 Tripterygium wilfordii HOM05D005581 ORTHO05D006792 2.3e-62 243.0 192 64.1
vmacro05787 Vaccinium macrocarpon HOM05D005581 ORTHO05D006792 3.0e-62 242.7 153 73.9
EL10Ac7g18000 Beta vulgaris HOM05D005581 ORTHO05D006792 3.9e-62 242.3 175 66.9
THA.LOC104823921 Tarenaya hassleriana HOM05D005581 ORTHO05D006792 1.6e-60 236.9 198 58.6
Sp7g01930 Schrenkiella parvula HOM05D005581 ORTHO05D006792 1.8e-59 233.4 177 63.3
Thhalv10027934m.g Eutrema salsugineum HOM05D005581 ORTHO05D006792 3.1e-59 232.6 170 63.5
SEGI_16176 Sequoiadendron giganteum HOM05D005581 ORTHO05D006792 9.0e-59 231.1 188 59.6
BraA04t16955Z Brassica rapa HOM05D005581 ORTHO05D006792 1.5e-58 230.3 186 61.3
BcaB06g27424 Brassica carinata HOM05D005581 ORTHO05D006792 5.8e-58 228.4 200 56.5
C04p46650 Brassica napus HOM05D005581 ORTHO05D006792 1.3e-57 227.3 201 56.7
BolC4t26253H Brassica oleracea HOM05D005581 ORTHO05D006792 1.3e-57 227.3 201 56.7
A04p12950 Brassica napus HOM05D005581 ORTHO05D006792 1.7e-57 226.9 186 60.8
Cc07_g02660 Coffea canephora HOM05D005581 ORTHO05D006792 8.4e-57 224.6 137 79.6
MD09G1040100 Malus domestica HOM05D005581 ORTHO05D006792 1.4e-56 223.8 312 42.6
Atru.chr8.2410 Acer truncatum HOM05D005581 ORTHO05D006792 6.0e-55 218.4 129 75.2
SMO356G0730 Selaginella moellendorffii HOM05D005581 ORTHO05D006792 8.1e-52 208.0 171 60.2
Psat3g011960 Pisum sativum HOM05D005581 ORTHO05D006792 2.0e-50 203.4 137 71.5
AagrBONN_evm.TU.Sc2ySwM_368.1768 Anthoceros agrestis HOM05D005581 ORTHO05D006792 1.3e-49 200.7 166 57.8
Mapoly0035s0056 Marchantia polymorpha HOM05D005581 ORTHO05D006792 2.2e-49 199.9 192 49.5
Aa31LG9G1540 Aethionema arabicum HOM05D005581 ORTHO05D006792 6.0e-47 191.8 151 65.6
Haze_14640 Corylus avellana HOM05D005581 ORTHO05D006792 3.3e-45 186.0 141 68.8
Pp3c1_40840 Physcomitrium patens HOM05D005581 ORTHO05D006792 4.1e-43 179.1 165 53.3
MSTRG.21916 Avicennia marina HOM05D005581 ORTHO05D006792 1.1e-40 171.0 169 54.4
CBR_g36833 Chara braunii HOM05D005581 ORTHO05D006792 3.2e-40 169.5 203 44.3
Migut.N00270 Erythranthe guttata HOM05D005581 ORTHO05D006792 7.4e-37 158.3 172 51.2
Migut.H00162 Erythranthe guttata HOM05D005581 ORTHO05D006792 5.3e-35 152.1 154 48.7
Migut.H00166 Erythranthe guttata HOM05D005581 ORTHO05D006792 1.5e-34 150.6 166 48.2
PRCOL_00005184 Prasinoderma coloniale HOM05D005581 ORTHO05D006792 1.7e-33 147.1 172 42.4
SalBow3G2496 Salvia bowleyana HOM05D005581 ORTHO05D006792 1.5e-29 134.0 169 42.6
Cre10.g440700 Chlamydomonas reinhardtii HOM05D005581 ORTHO05D006792 4.4e-29 132.5 207 33.8
Glyma.17G043600 Glycine max HOM05D005581 ORTHO05D006792 4.8e-28 129.0 78 71.8
HPP92_018422 Vanilla planifolia HOM05D005581 ORTHO05D006792 1.7e-20 104.0 65 66.2
PRCOL_00002387 Prasinoderma coloniale HOM05D005581 ORTHO05D006792 4.5e-18 95.9 192 32.8
CDE06G0755 Ceratophyllum demersum HOM05D005581 ORTHO05D006792 7.5e-13 78.6 51 70.6
HanXRQChr17g0548091 Helianthus annuus HOM05D005581 ORTHO05D006792 3.7e-12 76.3 62 54.8
arahy.Tifrunner.gnm1.ann1.C3UJQ4 Arachis hypogaea HOM05D005581 ORTHO05D006792 1.0e-09 68.2 69 49.3
MBI15_g46244_MAGBIO Magnolia biondii HOM05D005581 ORTHO05D006792 3.2e-08 63.2 48 68.8


User provided reference genes

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