Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.23968 Avicennia marina HOM05D007804 ORTHO05D009828 1.5e-81 306.2 167 100.0
SGA_v2.0_scaffold135G34801 Striga asiatica HOM05D007804 ORTHO05D009828 2.3e-29 132.9 156 57.1
SalBow1G7839 Salvia bowleyana HOM05D007804 ORTHO05D009828 5.7e-28 128.3 158 53.2
Migut.K01348 Erythranthe guttata HOM05D007804 ORTHO05D009828 3.2e-23 112.5 158 52.5
unitig_899.g15501 Utricularia gibba HOM05D007804 ORTHO05D009828 1.0e-21 107.5 149 48.3
Peaxi162Scf00129g00628 Petunia axillaris HOM05D007804 ORTHO05D009828 2.0e-20 103.2 157 43.9
Nitab4.5_0002265g0080 Nicotiana tabacum HOM05D007804 ORTHO05D009828 7.4e-20 101.3 157 44.6
Oeu017303.1 Olea europaea HOM05D007804 ORTHO05D009828 1.3e-19 100.5 154 46.1
Nitab4.5_0001239g0070 Nicotiana tabacum HOM05D007804 ORTHO05D009828 3.7e-19 99.0 161 42.2
Migut.H00872 Erythranthe guttata HOM05D007804 ORTHO05D009828 6.3e-19 98.2 159 48.4
ECA232G1800 Erigeron canadensis HOM05D007804 ORTHO05D009828 1.1e-18 97.4 159 42.8
Lsat_1_v5_gn_4_180340 Lactuca sativa HOM05D007804 ORTHO05D009828 1.1e-18 97.4 155 49.0
Sopen02g032190 Solanum pennellii HOM05D007804 ORTHO05D009828 1.8e-18 96.7 165 42.4
DCAR_011178 Daucus carota HOM05D007804 ORTHO05D009828 9.1e-18 94.4 157 47.1
Solyc02g087440.4 Solanum lycopersicum HOM05D007804 ORTHO05D009828 4.5e-17 92.0 165 42.4
CiPaw.03G032600 Carya illinoinensis HOM05D007804 ORTHO05D009828 7.7e-17 91.3 155 40.6
Cfa007487 Carpinus fangiana HOM05D007804 ORTHO05D009828 1.0e-16 90.9 156 39.7
PGSC0003DMG402001401 Solanum tuberosum HOM05D007804 ORTHO05D009828 2.2e-16 89.7 162 40.7
CSS0004616 Camellia sinensis var. sinensis HOM05D007804 ORTHO05D009828 3.8e-16 89.0 160 42.5
CAN.G206.83 Capsicum annuum HOM05D007804 ORTHO05D009828 2.5e-15 86.3 179 39.1
Actinidia02723 Actinidia chinensis HOM05D007804 ORTHO05D009828 3.2e-15 85.9 150 39.3
Prupe.3G275600 Prunus persica HOM05D007804 ORTHO05D009828 1.2e-14 84.0 153 41.2
Cpa.g.sc14.66 Carica papaya HOM05D007804 ORTHO05D009828 2.1e-14 83.2 149 40.3
QL02p079311 Quercus lobata HOM05D007804 ORTHO05D009828 4.7e-14 82.0 154 40.3
Oeu027756.1 Olea europaea HOM05D007804 ORTHO05D009828 6.1e-14 81.6 146 43.2
Duzib147G0590 Durio zibethinus HOM05D007804 ORTHO05D009828 1.8e-13 80.1 153 37.9
Rhsim08G0063700 Rhododendron simsii HOM05D007804 ORTHO05D009828 1.5e-12 77.0 154 39.0
Thecc.04G069800 Theobroma cacao HOM05D007804 ORTHO05D009828 1.5e-12 77.0 150 36.0
COL.COLO4_36996 Corchorus olitorius HOM05D007804 ORTHO05D009828 2.0e-12 76.6 138 37.7
Manes.15G177500 Manihot esculenta HOM05D007804 ORTHO05D009828 2.6e-12 76.3 162 36.4
Gohir.D09G022600 Gossypium hirsutum HOM05D007804 ORTHO05D009828 3.3e-12 75.9 153 40.5
Gorai.006G026600 Gossypium raimondii HOM05D007804 ORTHO05D009828 3.3e-12 75.9 160 38.1
Hma1.2p1_0375F.1_g138910 Hydrangea macrophylla HOM05D007804 ORTHO05D009828 7.5e-12 74.7 146 37.7
Gohir.A09G023300 Gossypium hirsutum HOM05D007804 ORTHO05D009828 9.7e-12 74.3 155 37.4
Glyma.13G067400 Glycine max HOM05D007804 ORTHO05D009828 2.8e-11 72.8 177 35.0
ClCG09G018550 Citrullus lanatus HOM05D007804 ORTHO05D009828 6.3e-11 71.6 156 37.8
Manes.17G117500 Manihot esculenta HOM05D007804 ORTHO05D009828 1.1e-10 70.9 150 34.0
VMungo0464G0276 Vigna mungo HOM05D007804 ORTHO05D009828 1.1e-10 70.9 167 37.1
Sed0004613 Sechium edule HOM05D007804 ORTHO05D009828 1.8e-10 70.1 152 37.5
Sed0005835 Sechium edule HOM05D007804 ORTHO05D009828 1.8e-10 70.1 152 37.5
Lj2g0027470 Lotus japonicus HOM05D007804 ORTHO05D009828 2.4e-10 69.7 151 42.4
RcHm_v2.0_Chr2g0169751 Rosa chinensis HOM05D007804 ORTHO05D009828 7.0e-10 68.2 138 41.3
FvH4_6g49720 Fragaria vesca HOM05D007804 ORTHO05D009828 9.1e-10 67.8 141 40.4
FAN14G3729 Fragaria x ananassa HOM05D007804 ORTHO05D009828 9.1e-10 67.8 141 40.4
Phvul.004G023300 Phaseolus vulgaris HOM05D007804 ORTHO05D009828 9.1e-10 67.8 161 37.3
Glyma.19G017000 Glycine max HOM05D007804 ORTHO05D009828 1.2e-09 67.4 167 34.7
FAN05G0497 Fragaria x ananassa HOM05D007804 ORTHO05D009828 2.0e-09 66.6 135 44.4
Ciclev10012771m.g Citrus clementina HOM05D007804 ORTHO05D009828 2.7e-09 66.2 175 37.1
FAN02G3435 Fragaria x ananassa HOM05D007804 ORTHO05D009828 3.5e-09 65.9 153 39.9
Medtr6g009320 Medicago truncatula HOM05D007804 ORTHO05D009828 3.5e-09 65.9 161 34.2
MELO3C021487.2 Cucumis melo HOM05D007804 ORTHO05D009828 4.5e-09 65.5 154 37.0
FAN09G3343 Fragaria x ananassa HOM05D007804 ORTHO05D009828 4.5e-09 65.5 135 39.3
Psat1g077320 Pisum sativum HOM05D007804 ORTHO05D009828 5.9e-09 65.1 156 33.3
THA.LOC104805425 Tarenaya hassleriana HOM05D007804 ORTHO05D009828 5.9e-09 65.1 190 35.3
Sed0002452 Sechium edule HOM05D007804 ORTHO05D009828 1.0e-08 64.3 160 36.2
CsaV3_5G037680 Cucumis sativus L. HOM05D007804 ORTHO05D009828 1.3e-08 63.9 166 34.9
Lalb_Chr21g0319161 Lupinus albus HOM05D007804 ORTHO05D009828 1.7e-08 63.5 162 40.1
Manes.17G120501 Manihot esculenta HOM05D007804 ORTHO05D009828 2.2e-08 63.2 148 34.5
TPR.G32605 Trifolium pratense HOM05D007804 ORTHO05D009828 6.5e-08 61.6 170 34.7
Psat1g077160 Pisum sativum HOM05D007804 ORTHO05D009828 9.4e-07 57.8 168 31.5
TWI36G0430 Tripterygium wilfordii HOM05D007804 ORTHO05D009828 2.1e-06 56.6 138 34.8
Nn3g17058 Nelumbo nucifera HOM05D007804 ORTHO05D009828 3.6e-06 55.8 160 33.1


User provided reference genes

Program Settings