Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.23836 Avicennia marina HOM05D001568 ORTHO05D004404 2.6e-44 181.8 101 100.0
CSS0005518 Camellia sinensis var. sinensis HOM05D001568 ORTHO05D004404 8.0e-09 63.9 90 46.7
CSS0039733 Camellia sinensis var. sinensis HOM05D001568 ORTHO05D004404 8.0e-09 63.9 90 46.7
Eucgr.I02108 Eucalyptus grandis HOM05D001568 ORTHO05D004404 2.3e-08 62.4 96 43.8
Thecc.04G144700 Theobroma cacao HOM05D001568 ORTHO05D004404 7.5e-07 57.4 60 50.0
TAR622G0735 Trochodendron aralioides HOM05D000764 ORTHO05D002006 7.5e-07 57.4 64 50.0
QL02p053549 Quercus lobata HOM05D001568 ORTHO05D004404 1.3e-06 56.6 83 48.2
FvH4_6g45650 Fragaria vesca HOM05D001568 ORTHO05D004404 1.7e-06 56.2 56 53.6
Hma1.2p1_0588F.1_g184400 Hydrangea macrophylla HOM05D001568 ORTHO05D004404 1.7e-06 56.2 53 56.6
Potri.017G109900 Populus trichocarpa HOM05D001568 ORTHO05D004404 1.7e-06 56.2 61 54.1
RcHm_v2.0_Chr2g0163791 Rosa chinensis HOM05D001568 ORTHO05D004404 1.7e-06 56.2 55 54.5
FAN14G3562 Fragaria x ananassa HOM05D001568 ORTHO05D004404 2.2e-06 55.8 68 45.6
CiPaw.04G004300 Carya illinoinensis HOM05D001568 ORTHO05D004404 2.8e-06 55.5 52 57.7
COL.COLO4_08509 Corchorus olitorius HOM05D001568 ORTHO05D004404 2.8e-06 55.5 63 49.2
FAN05G3918 Fragaria x ananassa HOM05D001568 ORTHO05D004404 2.8e-06 55.5 56 53.6
Lj1g0007549 Lotus japonicus HOM05D001568 ORTHO05D004404 2.8e-06 55.5 53 52.8
Manes.01G107200 Manihot esculenta HOM05D001568 ORTHO05D004404 2.8e-06 55.5 53 54.7
Manes.02G064800 Manihot esculenta HOM05D001568 ORTHO05D004404 2.8e-06 55.5 53 54.7
Medtr7g019160 Medicago truncatula HOM05D001568 ORTHO05D004404 2.8e-06 55.5 53 56.6
Oeu032864.1 Olea europaea HOM05D001568 ORTHO05D004404 2.8e-06 55.5 67 52.2
Migut.H00549 Erythranthe guttata HOM05D001568 ORTHO05D004404 3.7e-06 55.1 65 52.3
Gohir.D07G077600 Gossypium hirsutum HOM05D001568 ORTHO05D004404 3.7e-06 55.1 70 47.1
Potri.017G109800 Populus trichocarpa HOM05D001568 ORTHO05D004404 3.7e-06 55.1 61 54.1
TAR371G0241 Trochodendron aralioides HOM05D001568 ORTHO05D004404 3.7e-06 55.1 52 55.8
ECA246G2394 Erigeron canadensis HOM05D001568 ORTHO05D004404 4.8e-06 54.7 68 47.1
Glyma.18G279700 Glycine max HOM05D001568 ORTHO05D004404 6.3e-06 54.3 53 52.8
Glyma.19G042000 Glycine max HOM05D001568 ORTHO05D004404 8.2e-06 53.9 54 53.7
Gorai.001G082100 Gossypium raimondii HOM05D001568 ORTHO05D004404 8.2e-06 53.9 70 47.1
Prupe.3G242600 Prunus persica HOM05D001568 ORTHO05D004404 8.2e-06 53.9 53 50.9
SalBow1G1780 Salvia bowleyana HOM05D001568 ORTHO05D004404 8.2e-06 53.9 62 56.5
SalBow1G7911 Salvia bowleyana HOM05D001568 ORTHO05D004404 8.2e-06 53.9 62 56.5


User provided reference genes

Program Settings