Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.23805 Avicennia marina HOM05D007578 ORTHO05D009497 4.1e-95 351.7 215 100.0
SGA_v2.0_scaffold15G07205 Striga asiatica HOM05D007578 ORTHO05D009497 1.6e-38 163.7 162 77.2
Cc07_g05400 Coffea canephora HOM05D007578 ORTHO05D009497 1.7e-32 143.7 168 69.0
Nitab4.5_0000108g0140 Nicotiana tabacum HOM05D007578 ORTHO05D009497 1.7e-32 143.7 162 69.1
Nitab4.5_0007463g0020 Nicotiana tabacum HOM05D007578 ORTHO05D009497 2.2e-32 143.3 162 69.1
Migut.H00501 Erythranthe guttata HOM05D007578 ORTHO05D009497 9.2e-31 137.9 125 80.0
Peaxi162Scf00535g00071 Petunia axillaris HOM05D007578 ORTHO05D009497 4.0e-26 122.5 163 62.6
Oeu032922.1 Olea europaea HOM05D007578 ORTHO05D009497 8.9e-26 121.3 163 62.6
Lj4P136T24 Lonicera japonica HOM05D007578 ORTHO05D009497 2.0e-25 120.2 133 70.7
SalBow1G1613 Salvia bowleyana HOM05D007578 ORTHO05D009497 2.0e-25 120.2 130 73.1
DCAR_010946 Daucus carota HOM05D007578 ORTHO05D009497 2.9e-24 116.3 164 64.0
Sopen02g034790 Solanum pennellii HOM05D007578 ORTHO05D009497 4.9e-24 115.5 163 62.0
CAN.G836.20 Capsicum annuum HOM05D007578 ORTHO05D009497 1.4e-23 114.0 132 71.2
TPR.G29848 Trifolium pratense HOM05D007578 ORTHO05D009497 1.9e-23 113.6 127 72.4
Ca_24809_v3 Cicer arietinum L. HOM05D007578 ORTHO05D009497 3.2e-23 112.8 127 66.1
Psat0s4627g0160 Pisum sativum HOM05D007578 ORTHO05D009497 3.2e-23 112.8 129 72.1
Solyc02g090100.1 Solanum lycopersicum HOM05D007578 ORTHO05D009497 7.1e-23 111.7 163 61.3
QL06p044247 Quercus lobata HOM05D007578 ORTHO05D009497 4.6e-22 109.0 168 60.1
Prupe.7G145300 Prunus persica HOM05D007578 ORTHO05D009497 1.0e-21 107.8 156 60.3
CiPaw.01G029100 Carya illinoinensis HOM05D007578 ORTHO05D009497 2.3e-21 106.7 127 70.9
CSS0031523 Camellia sinensis var. sinensis HOM05D007578 ORTHO05D009497 6.6e-21 105.1 172 61.0
CSS0032257 Camellia sinensis var. sinensis HOM05D007578 ORTHO05D009497 6.6e-21 105.1 172 61.0
Sabra07G0029900 Salix brachista HOM05D007578 ORTHO05D009497 6.6e-21 105.1 148 62.8
PGSC0003DMG400037576 Solanum tuberosum HOM05D007578 ORTHO05D009497 6.6e-21 105.1 163 59.5
Lalb_Chr16g0378091 Lupinus albus HOM05D007578 ORTHO05D009497 2.5e-20 103.2 173 54.9
Lalb_Chr16g0378311 Lupinus albus HOM05D007578 ORTHO05D009497 2.5e-20 103.2 173 54.9
Glyma.01G182600 Glycine max HOM05D007578 ORTHO05D009497 3.3e-20 102.8 133 69.2
Manes.13G132100 Manihot esculenta HOM05D007578 ORTHO05D009497 3.3e-20 102.8 164 61.6
unitig_21.g20937 Utricularia gibba HOM05D000261 ORTHO05D001168 3.3e-20 102.8 156 59.6
Potri.007G034300 Populus trichocarpa HOM05D007578 ORTHO05D009497 5.6e-20 102.1 168 58.3
Sc03g0001220 Simmondsia chinensis HOM05D007578 ORTHO05D009497 5.6e-20 102.1 164 48.8
Medtr5g018590 Medicago truncatula HOM05D007578 ORTHO05D009497 7.3e-20 101.7 127 67.7
Sed0003773 Sechium edule HOM05D007578 ORTHO05D009497 7.3e-20 101.7 163 63.2
Ah.03g142130 Amaranthus hybridus HOM05D007578 ORTHO05D009497 9.6e-20 101.3 129 67.4
Gohir.A02G161500 Gossypium hirsutum HOM05D007578 ORTHO05D009497 9.6e-20 101.3 158 53.8
COL.COLO4_22180 Corchorus olitorius HOM05D007578 ORTHO05D009497 1.3e-19 100.9 169 57.4
Glyma.11G060900 Glycine max HOM05D007578 ORTHO05D009497 2.1e-19 100.1 133 68.4
Thecc.01G045800 Theobroma cacao HOM05D007578 ORTHO05D009497 2.1e-19 100.1 169 58.6
Gorai.003G019400 Gossypium raimondii HOM05D007578 ORTHO05D009497 2.8e-19 99.8 158 56.3
THA.LOC104804219 Tarenaya hassleriana HOM05D007578 ORTHO05D009497 4.8e-19 99.0 145 62.8
Duzib147G1180 Durio zibethinus HOM05D007578 ORTHO05D009497 6.2e-19 98.6 132 65.2
Hma1.2p1_0261F.1_g104930 Hydrangea macrophylla HOM05D007578 ORTHO05D009497 6.2e-19 98.6 131 64.1
arahy.Tifrunner.gnm1.ann1.25C3YR Arachis hypogaea HOM05D007578 ORTHO05D009497 8.1e-19 98.2 133 68.4
Haze_15166 Corylus avellana HOM05D007578 ORTHO05D009497 1.1e-18 97.8 173 56.6
TAR376G0355 Trochodendron aralioides HOM05D007578 ORTHO05D009497 1.4e-18 97.4 168 59.5
MD15G1273300 Malus domestica HOM05D007578 ORTHO05D009497 3.1e-18 96.3 162 58.6
TAR628G0552 Trochodendron aralioides HOM05D007578 ORTHO05D009497 4.0e-18 95.9 173 56.6
Duzib264G1198 Durio zibethinus HOM05D007578 ORTHO05D009497 6.9e-18 95.1 132 62.9
arahy.Tifrunner.gnm1.ann1.UX6CPD Arachis hypogaea HOM05D007578 ORTHO05D009497 1.5e-17 94.0 173 56.6
CANSAT01G2356 Cannabis sativa HOM05D007578 ORTHO05D009497 2.0e-17 93.6 132 66.7
PGR102G1240 Punica granatum HOM05D007578 ORTHO05D009497 2.0e-17 93.6 169 59.2
MBI07_g23234_MAGBIO Magnolia biondii HOM05D007578 ORTHO05D009497 3.4e-17 92.8 169 57.4
RcHm_v2.0_Chr2g0103251 Rosa chinensis HOM05D007578 ORTHO05D009497 3.4e-17 92.8 160 56.2
Actinidia36527 Actinidia chinensis HOM05D007578 ORTHO05D009497 5.8e-17 92.0 165 58.2
MELO3C020917.2 Cucumis melo HOM05D007578 ORTHO05D009497 9.9e-17 91.3 166 57.2
Phvul.002G023600 Phaseolus vulgaris HOM05D007578 ORTHO05D009497 1.3e-16 90.9 133 68.4
Rhsim06G0070400 Rhododendron simsii HOM05D002920 ORTHO05D009497 1.3e-16 90.9 171 57.3
Dinv39922 Davidia involucrata HOM05D007578 ORTHO05D009497 1.7e-16 90.5 218 48.2
AUR62027241 Chenopodium quinoa HOM05D003724 ORTHO05D009497 2.2e-16 90.1 138 63.0
AL4G13660 Arabidopsis lyrata HOM05D007578 ORTHO05D009497 2.9e-16 89.7 128 64.1
AT2G23670 Arabidopsis thaliana HOM05D007578 ORTHO05D009497 2.9e-16 89.7 128 60.2
CARHR114700 Cardamine hirsuta HOM05D007578 ORTHO05D009497 2.9e-16 89.7 128 64.1
Thhalv10000353m.g Eutrema salsugineum HOM05D007578 ORTHO05D009497 3.8e-16 89.4 149 54.4
Aa31LG7G13200 Aethionema arabicum HOM05D007578 ORTHO05D009497 4.9e-16 89.0 171 54.4
EL10Ac6g14844 Beta vulgaris HOM05D007578 ORTHO05D009497 8.4e-16 88.2 168 47.6
Gohir.D03G019000 Gossypium hirsutum HOM05D007578 ORTHO05D009497 8.4e-16 88.2 149 55.0
Carub.0004s0288 Capsella rubella HOM05D007578 ORTHO05D009497 1.4e-15 87.4 167 52.1
CAN.G1525.2 Capsicum annuum HOM05D007578 ORTHO05D009497 2.4e-15 86.7 150 55.3
CDE11G1131 Ceratophyllum demersum HOM05D007578 ORTHO05D009497 2.4e-15 86.7 131 54.2
Ciclev10026636m.g Citrus clementina HOM05D007578 ORTHO05D009497 2.4e-15 86.7 176 48.3
Gohir.A11G045100 Gossypium hirsutum HOM05D007578 ORTHO05D009497 3.2e-15 86.3 132 61.4
TWI53G0440 Tripterygium wilfordii HOM05D007578 ORTHO05D009497 3.2e-15 86.3 121 67.8
BraA04t17423Z Brassica rapa HOM05D007578 ORTHO05D009497 4.2e-15 85.9 128 63.3
ClCG02G013060 Citrullus lanatus HOM05D007578 ORTHO05D009497 4.2e-15 85.9 143 59.4
Dinv26776 Davidia involucrata HOM05D007578 ORTHO05D009497 4.2e-15 85.9 144 56.2
FAN23G2171 Fragaria x ananassa HOM05D007578 ORTHO05D009497 4.2e-15 85.9 128 61.7
Sp4g02640 Schrenkiella parvula HOM05D007578 ORTHO05D009497 4.2e-15 85.9 134 62.7
A04p18050 Brassica napus HOM05D007578 ORTHO05D009497 5.4e-15 85.5 128 63.3
CsaV3_2G017140 Cucumis sativus L. HOM05D007578 ORTHO05D009497 5.4e-15 85.5 168 56.0
Gorai.007G052200 Gossypium raimondii HOM05D007578 ORTHO05D009497 5.4e-15 85.5 132 60.6
FAN26G3047 Fragaria x ananassa HOM05D007578 ORTHO05D009497 1.2e-14 84.3 161 54.7
C04p52990 Brassica napus HOM05D007578 ORTHO05D009497 1.6e-14 84.0 170 54.1
BolC4t26860H Brassica oleracea HOM05D007578 ORTHO05D009497 1.6e-14 84.0 170 54.1
FAN19G1163 Fragaria x ananassa HOM05D007578 ORTHO05D009497 2.1e-14 83.6 160 53.1
Gohir.D11G048600 Gossypium hirsutum HOM05D007578 ORTHO05D009497 2.1e-14 83.6 169 53.8
BcaB06g27923 Brassica carinata HOM05D007578 ORTHO05D009497 7.9e-14 81.6 167 53.3
FvH4_1g14510 Fragaria vesca HOM05D007578 ORTHO05D009497 7.9e-14 81.6 160 52.5
Aqoxy2G01906 Aquilegia oxysepala HOM05D007578 ORTHO05D009497 1.0e-13 81.3 162 53.1
Lsat_1_v5_gn_3_94000 Lactuca sativa HOM05D007578 ORTHO05D009497 1.0e-13 81.3 168 53.6
Peaxi162Scf00150g00132 Petunia axillaris HOM05D007578 ORTHO05D009497 1.3e-13 80.9 109 69.7
Cpa.g.sc15.63 Carica papaya HOM05D007578 ORTHO05D009497 3.0e-13 79.7 177 50.8
MD02G1158500 Malus domestica HOM05D007578 ORTHO05D009497 5.1e-13 79.0 166 54.2
HanXRQChr12g0378461 Helianthus annuus HOM05D007578 ORTHO05D009497 3.3e-12 76.3 124 45.2
HPP92_014833 Vanilla planifolia HOM05D007578 ORTHO05D009497 7.4e-12 75.1 137 46.0
FAN28G2485 Fragaria x ananassa HOM05D007578 ORTHO05D009497 2.8e-11 73.2 103 65.0
Atru.chr3.471 Acer truncatum HOM05D007578 ORTHO05D009497 4.0e-10 69.3 162 54.9
PSO017G5052 Papaver somniferum HOM05D007578 ORTHO05D009497 2.9e-08 63.2 176 49.4
PSO170G5738 Papaver somniferum HOM05D007578 ORTHO05D009497 4.9e-08 62.4 181 38.7
ECA246G0471 Erigeron canadensis HOM05D007578 ORTHO05D009497 8.4e-08 61.6 116 57.8
ATR0787G067 Amborella trichopoda HOM05D007578 ORTHO05D009497 1.1e-07 61.2 153 37.3


User provided reference genes

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