Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.23730 Avicennia marina HOM05D002633 ORTHO05D002815 4.0e-81 304.7 150 100.0
MSTRG.2868 Avicennia marina HOM05D002633 ORTHO05D002815 1.5e-08 63.5 197 29.4
CSS0000427 Camellia sinensis var. sinensis HOM05D002633 ORTHO05D002815 2.9e-07 59.3 39 71.8
Phvul.003G047400 Phaseolus vulgaris HOM05D002633 ORTHO05D002815 3.8e-07 58.9 59 52.5
Lalb_Chr05g0219341 Lupinus albus HOM05D002633 ORTHO05D002815 5.0e-07 58.5 59 50.8
Oeu001770.1 Olea europaea HOM05D002633 ORTHO05D002815 5.0e-07 58.5 59 50.8
FvH4_1g16360 Fragaria vesca HOM05D002633 ORTHO05D002815 6.5e-07 58.2 39 71.8
FAN19G2619 Fragaria x ananassa HOM05D002633 ORTHO05D002815 6.5e-07 58.2 39 71.8
FAN23G1997 Fragaria x ananassa HOM05D002633 ORTHO05D002815 6.5e-07 58.2 39 71.8
FAN26G2702 Fragaria x ananassa HOM05D002633 ORTHO05D002815 6.5e-07 58.2 39 71.8
FAN28G0068 Fragaria x ananassa HOM05D002633 ORTHO05D002815 6.5e-07 58.2 39 71.8
Prupe.6G231600 Prunus persica HOM05D002633 ORTHO05D002815 6.5e-07 58.2 39 74.4
RcHm_v2.0_Chr2g0106231 Rosa chinensis HOM05D002633 ORTHO05D002815 6.5e-07 58.2 39 71.8
Ca_18713_v3 Cicer arietinum L. HOM05D002633 ORTHO05D002815 8.5e-07 57.8 96 41.7
Ca_18717_v3 Cicer arietinum L. HOM05D002633 ORTHO05D002815 8.5e-07 57.8 96 41.7
ClCG01G012570 Citrullus lanatus HOM05D002633 ORTHO05D002815 8.5e-07 57.8 39 71.8
Ciclev10029198m.g Citrus clementina HOM05D002633 ORTHO05D002815 8.5e-07 57.8 39 69.2
Dinv26846 Davidia involucrata HOM05D002633 ORTHO05D002815 8.5e-07 57.8 39 69.2
Migut.H00412 Erythranthe guttata HOM05D002633 ORTHO05D002815 8.5e-07 57.8 39 71.8
PGR102G3143 Punica granatum HOM05D002633 ORTHO05D002815 8.5e-07 57.8 66 51.5
Medtr4g485640 Medicago truncatula HOM05D000090 ORTHO05D000083 1.1e-06 57.4 39 66.7
Oeu044297.2 Olea europaea HOM05D002633 ORTHO05D002815 1.1e-06 57.4 39 66.7
Potri.007G046400 Populus trichocarpa HOM05D002633 ORTHO05D002815 1.1e-06 57.4 39 71.8
SGA_v2.0_scaffold15G07341 Striga asiatica HOM05D002633 ORTHO05D002815 1.4e-06 57.0 39 64.1
COL.COLO4_11453 Corchorus olitorius HOM05D002633 ORTHO05D002815 1.9e-06 56.6 39 69.2
Duzib147G0055 Durio zibethinus HOM05D002633 ORTHO05D002815 1.9e-06 56.6 39 66.7
Duzib264G0568 Durio zibethinus HOM05D002633 ORTHO05D002815 1.9e-06 56.6 39 69.2
Psat7g126600 Pisum sativum HOM05D002633 ORTHO05D002815 1.9e-06 56.6 59 49.2
TPR.G12600 Trifolium pratense HOM05D002633 ORTHO05D009113 1.9e-06 56.6 59 54.2
Atru.chr3.281 Acer truncatum HOM05D002633 ORTHO05D002815 2.5e-06 56.2 39 69.2
Cc07_g06210 Coffea canephora HOM05D002633 ORTHO05D002815 2.5e-06 56.2 39 66.7
Glyma.02G104200 Glycine max HOM05D002633 ORTHO05D002815 2.5e-06 56.2 59 50.8
Glyma.07G215400 Glycine max HOM05D002633 ORTHO05D002815 2.5e-06 56.2 59 50.8
VMungo0251G2274 Vigna mungo HOM05D002633 ORTHO05D002815 2.5e-06 56.2 59 50.8
Atru.chr5.2638 Acer truncatum HOM05D002633 ORTHO05D002815 3.2e-06 55.8 39 66.7
Actinidia12032 Actinidia chinensis HOM05D002633 ORTHO05D002815 3.2e-06 55.8 59 50.8
Actinidia36472 Actinidia chinensis HOM05D002633 ORTHO05D002815 3.2e-06 55.8 59 50.8
Gorai.003G026000 Gossypium raimondii HOM05D002633 ORTHO05D002815 3.2e-06 55.8 44 59.1
Hma1.2p1_0017F.1_g011580 Hydrangea macrophylla HOM05D002633 ORTHO05D002815 3.2e-06 55.8 39 66.7
Eucgr.H02093 Eucalyptus grandis HOM05D002633 ORTHO05D002815 4.2e-06 55.5 39 69.2
Gohir.D03G024450 Gossypium hirsutum HOM05D002633 ORTHO05D002815 4.2e-06 55.5 39 66.7
Manes.13G120500 Manihot esculenta HOM05D002633 ORTHO05D002815 4.2e-06 55.5 39 69.2
Rhsim10G0114000 Rhododendron simsii HOM05D002633 ORTHO05D002815 4.2e-06 55.5 41 63.4
RcHm_v2.0_Chr6g0256581 Rosa chinensis HOM05D002633 ORTHO05D002815 4.2e-06 55.5 59 49.2
Cpa.g.sc55.114 Carica papaya HOM05D002633 ORTHO05D002815 5.5e-06 55.1 39 66.7
Ciclev10026357m.g Citrus clementina HOM05D002633 ORTHO05D002815 5.5e-06 55.1 39 66.7
Gohir.A02G156200 Gossypium hirsutum HOM05D002633 ORTHO05D002815 5.5e-06 55.1 39 64.1
Lj4g0011527 Lotus japonicus HOM05D002633 ORTHO05D002815 5.5e-06 55.1 59 49.2
MD02G1176100 Malus domestica HOM05D002633 ORTHO05D002815 5.5e-06 55.1 39 69.2
Nn5g30364 Nelumbo nucifera HOM05D002633 ORTHO05D002815 5.5e-06 55.1 39 66.7
Peaxi162Scf00549g00113 Petunia axillaris HOM05D002633 ORTHO05D002815 5.5e-06 55.1 39 66.7
GSVIVG01022078001 Vitis vinifera HOM05D002633 ORTHO05D002815 5.5e-06 55.1 39 66.7
CiPaw.04G131300 Carya illinoinensis HOM05D002633 ORTHO05D002815 7.2e-06 54.7 39 64.1
MELO3C004761.2 Cucumis melo HOM05D002633 ORTHO05D002815 7.2e-06 54.7 39 69.2
CsaV3_1G014580 Cucumis sativus L. HOM05D002633 ORTHO05D002815 7.2e-06 54.7 39 69.2
Migut.N01176 Erythranthe guttata HOM05D002633 ORTHO05D002815 7.2e-06 54.7 59 49.2
FvH4_2g05710 Fragaria vesca HOM05D002633 ORTHO05D002815 7.2e-06 54.7 39 64.1
FAN15G3599 Fragaria x ananassa HOM05D002633 ORTHO05D002815 7.2e-06 54.7 39 64.1
FAN20G2248 Fragaria x ananassa HOM05D002633 ORTHO05D002815 7.2e-06 54.7 39 64.1
FAN24G1354 Fragaria x ananassa HOM05D002633 ORTHO05D002815 7.2e-06 54.7 39 64.1
FAN27G2082 Fragaria x ananassa HOM05D002633 ORTHO05D002815 7.2e-06 54.7 39 64.1
QL06p040557 Quercus lobata HOM05D002633 ORTHO05D002815 7.2e-06 54.7 39 66.7
TAR381G1526 Trochodendron aralioides HOM05D002633 ORTHO05D002815 7.2e-06 54.7 39 64.1
TAR625G1208 Trochodendron aralioides HOM05D002633 ORTHO05D002815 7.2e-06 54.7 39 64.1
CANSAT01G2936 Cannabis sativa HOM05D002633 ORTHO05D002815 9.4e-06 54.3 39 66.7
Nn1g04776 Nelumbo nucifera HOM05D002633 ORTHO05D002815 9.4e-06 54.3 39 61.5
Nitab4.5_0002740g0080 Nicotiana tabacum HOM05D002633 ORTHO05D002815 9.4e-06 54.3 59 49.2


User provided reference genes

Program Settings