Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.23673 Avicennia marina HOM05D006223 ORTHO05D009080 2.1e-116 422.5 238 100.0
Migut.H00350 Erythranthe guttata HOM05D006223 ORTHO05D009080 4.7e-60 235.3 216 60.6
Dinv04050 Davidia involucrata HOM05D006223 ORTHO05D009080 1.7e-57 226.9 207 59.4
Actinidia11984 Actinidia chinensis HOM05D006223 ORTHO05D009080 1.0e-54 217.6 225 56.9
Nitab4.5_0000142g0070 Nicotiana tabacum HOM05D006223 ORTHO05D009080 3.9e-54 215.7 215 56.7
GSVIVG01000109001 Vitis vinifera HOM05D006223 ORTHO05D009080 2.1e-52 209.9 216 56.0
TPR.G24252 Trifolium pratense HOM05D006223 ORTHO05D009080 2.8e-52 209.5 206 54.9
Lj7A96T45 Lonicera japonica HOM05D006223 ORTHO05D009080 1.1e-51 207.6 215 55.3
Medtr4g097030 Medicago truncatula HOM05D006223 ORTHO05D009080 1.8e-51 206.8 205 54.1
Nitab4.5_0002119g0100 Nicotiana tabacum HOM05D006223 ORTHO05D009080 3.1e-51 206.1 218 54.1
Sed0023944 Sechium edule HOM05D006223 ORTHO05D009080 1.5e-50 203.8 226 52.2
CSS0009729 Camellia sinensis var. sinensis HOM05D006223 ORTHO05D009080 2.6e-50 203.0 194 55.7
CAN.G1075.35 Capsicum annuum HOM05D006223 ORTHO05D009080 5.8e-50 201.8 216 52.8
Cc06_g22830 Coffea canephora HOM05D006223 ORTHO05D009080 9.8e-50 201.1 201 57.2
Lj4g0019733 Lotus japonicus HOM05D006223 ORTHO05D009080 9.8e-50 201.1 218 52.3
Duzib147G0613 Durio zibethinus HOM05D006223 ORTHO05D009080 1.4e-48 197.2 228 50.9
Glyma.17G160900 Glycine max HOM05D006223 ORTHO05D009080 1.4e-48 197.2 209 51.7
TAR625G1165 Trochodendron aralioides HOM05D006223 ORTHO05D009080 1.4e-48 197.2 208 54.3
Atru.chr3.1008 Acer truncatum HOM05D006223 ORTHO05D009080 1.9e-48 196.8 227 50.2
Psat4g081960 Pisum sativum HOM05D006223 ORTHO05D009080 1.9e-48 196.8 204 51.5
Ca_22107_v3 Cicer arietinum L. HOM05D006223 ORTHO05D009080 3.2e-48 196.1 207 51.7
Ca_22114_v3 Cicer arietinum L. HOM05D006223 ORTHO05D009080 3.2e-48 196.1 207 51.7
GSVIVG01000118001 Vitis vinifera HOM05D006223 ORTHO05D009080 3.2e-48 196.1 208 53.4
TWI73G0604 Tripterygium wilfordii HOM05D006223 ORTHO05D009080 4.1e-48 195.7 202 52.0
Cpa.g.sc6.19 Carica papaya HOM05D006223 ORTHO05D009080 5.4e-48 195.3 217 50.7
TWI09G0585 Tripterygium wilfordii HOM05D006223 ORTHO05D009080 7.0e-48 194.9 207 53.1
Rhsim10G0099700 Rhododendron simsii HOM05D006223 ORTHO05D009080 9.2e-48 194.5 226 56.6
DCAR_025799 Daucus carota HOM05D006223 ORTHO05D009080 1.2e-47 194.1 210 52.4
Phvul.003G235100 Phaseolus vulgaris HOM05D006223 ORTHO05D009080 1.2e-47 194.1 209 52.2
Ciclev10026365m.g Citrus clementina HOM05D006223 ORTHO05D009080 2.1e-47 193.4 233 45.9
Haze_15285 Corylus avellana HOM05D006223 ORTHO05D009080 2.3e-46 189.9 227 47.6
MELO3C020909.2 Cucumis melo HOM05D006223 ORTHO05D009080 5.1e-46 188.7 213 52.1
Eucgr.I00706 Eucalyptus grandis HOM05D006223 ORTHO05D009080 8.6e-46 188.0 219 48.4
Glyma.05G105500 Glycine max HOM05D006223 ORTHO05D009080 1.5e-45 187.2 216 50.0
Gohir.A11G215000 Gossypium hirsutum HOM05D006223 ORTHO05D009080 1.9e-45 186.8 224 48.7
PGSC0003DMG400021418 Solanum tuberosum HOM05D006223 ORTHO05D009080 3.3e-45 186.0 209 48.8
HanXRQChr15g0472641 Helianthus annuus HOM05D006223 ORTHO05D009080 9.5e-45 184.5 206 52.4
Manes.12G113900 Manihot esculenta HOM05D006223 ORTHO05D009080 9.5e-45 184.5 212 50.5
Solyc02g092390.3 Solanum lycopersicum HOM05D006223 ORTHO05D009080 2.8e-44 183.0 227 47.6
PSO170G6824 Papaver somniferum HOM05D006223 ORTHO05D009080 3.6e-44 182.6 207 52.2
Aqoxy5G00869 Aquilegia oxysepala HOM05D006223 ORTHO05D009080 8.1e-44 181.4 215 47.0
Thecc.01G072400 Theobroma cacao HOM05D006223 ORTHO05D009080 8.1e-44 181.4 237 46.4
vmacro05408 Vaccinium macrocarpon HOM05D006223 ORTHO05D009080 8.1e-44 181.4 310 41.9
VMungo0251G3324 Vigna mungo HOM05D006223 ORTHO05D009080 1.1e-43 181.0 208 50.0
Lalb_Chr05g0225861 Lupinus albus HOM05D006223 ORTHO05D009080 2.3e-43 179.9 210 49.5
Peaxi162Scf00548g00643 Petunia axillaris HOM05D006223 ORTHO05D009080 2.3e-43 179.9 208 50.0
Potri.001G172500 Populus trichocarpa HOM05D006223 ORTHO05D009080 2.3e-43 179.9 218 51.8
Sopen02g036940 Solanum pennellii HOM05D006223 ORTHO05D009080 8.9e-43 177.9 204 49.5
Gorai.007G223400 Gossypium raimondii HOM05D006223 ORTHO05D009080 2.0e-42 176.8 214 49.1
AUR62040240 Chenopodium quinoa HOM05D006223 ORTHO05D009080 2.6e-42 176.4 217 48.4
Sabra01G0139200 Salix brachista HOM05D006223 ORTHO05D009080 2.6e-42 176.4 213 50.2
Nn5g30588 Nelumbo nucifera HOM05D006223 ORTHO05D009080 3.4e-42 176.0 226 48.7
Gohir.D11G208400 Gossypium hirsutum HOM05D006223 ORTHO05D009080 4.4e-42 175.6 214 47.2
CiPaw.01G004700 Carya illinoinensis HOM05D006223 ORTHO05D009080 5.8e-42 175.3 176 53.4
Hund16399 Selenicereus undatus HOM05D006223 ORTHO05D009080 1.3e-41 174.1 218 46.3
Lsat_1_v5_gn_3_86181 Lactuca sativa HOM05D006223 ORTHO05D009080 1.7e-41 173.7 206 50.0
ClCG02G012630 Citrullus lanatus HOM05D003401 ORTHO05D003906 2.9e-41 172.9 203 52.2
CANSAT01G0277 Cannabis sativa HOM05D006223 ORTHO05D009080 4.9e-41 172.2 211 48.8
ECA246G3554 Erigeron canadensis HOM05D006223 ORTHO05D009080 4.9e-41 172.2 205 49.8
THA.LOC104827599 Tarenaya hassleriana HOM05D006223 ORTHO05D009080 2.4e-40 169.9 211 49.8
RcHm_v2.0_Chr2g0108001 Rosa chinensis HOM05D006223 ORTHO05D009080 4.1e-40 169.1 205 47.3
arahy.Tifrunner.gnm1.ann1.BP3FRD Arachis hypogaea HOM05D006223 ORTHO05D009080 9.2e-40 167.9 209 46.4
FvH4_1g17670 Fragaria vesca HOM05D006223 ORTHO05D009080 1.2e-39 167.5 204 49.0
FAN28G1261 Fragaria x ananassa HOM05D006223 ORTHO05D009080 2.1e-39 166.8 204 48.0
FAN19G0818 Fragaria x ananassa HOM05D006223 ORTHO05D009080 2.7e-39 166.4 203 48.3
PGR004G2352 Punica granatum HOM05D006223 ORTHO05D009080 3.5e-39 166.0 187 51.9
Ah.03g140550 Amaranthus hybridus HOM05D006223 ORTHO05D009080 1.0e-38 164.5 158 58.9
AUR62004007 Chenopodium quinoa HOM05D006223 ORTHO05D009080 1.7e-38 163.7 197 48.7
Prupe.6G221000 Prunus persica HOM05D006223 ORTHO05D009080 1.7e-38 163.7 216 47.7
SGA_v2.0_scaffold72G24074 Striga asiatica HOM05D006223 ORTHO05D009080 2.3e-38 163.3 160 56.9
FAN26G2055 Fragaria x ananassa HOM05D006223 ORTHO05D009080 1.5e-37 160.6 204 47.1
Zm00001eb400790 Zea mays HOM05D006223 ORTHO05D009080 1.5e-37 160.6 203 49.3
Cfa004130 Carpinus fangiana HOM05D006223 ORTHO05D009080 1.6e-36 157.1 141 55.3
HPP92_024913 Vanilla planifolia HOM05D006223 ORTHO05D009080 2.1e-36 156.8 215 46.5
AT3G49890 Arabidopsis thaliana HOM05D006223 ORTHO05D009080 1.8e-35 153.7 209 43.1
AL5G29900 Arabidopsis lyrata HOM05D006223 ORTHO05D009080 3.1e-35 152.9 213 42.3
arahy.Tifrunner.gnm1.ann1.83HTFG Arachis hypogaea HOM05D006223 ORTHO05D009080 5.2e-35 152.1 243 39.9
CDE06G0771 Ceratophyllum demersum HOM05D006223 ORTHO05D009080 1.7e-33 147.1 205 42.4
Thhalv10010709m.g Eutrema salsugineum HOM05D006223 ORTHO05D009080 8.4e-33 144.8 205 44.4
Carub.0005s1625 Capsella rubella HOM05D006223 ORTHO05D009080 1.1e-32 144.4 210 42.9
MD15G1297100 Malus domestica HOM05D006223 ORTHO05D009080 2.4e-32 143.3 157 49.7
CARHR158970 Cardamine hirsuta HOM05D006223 ORTHO05D009080 4.2e-32 142.5 205 42.0
Sp5g12220 Schrenkiella parvula HOM05D006223 ORTHO05D009080 7.1e-32 141.7 207 40.6
ATR1153G042 Amborella trichopoda HOM05D006223 ORTHO05D009080 1.2e-31 141.0 211 46.4
Os03g0201200 Oryza sativa ssp. japonica HOM05D006223 ORTHO05D009080 2.7e-31 139.8 203 45.3
Aa31LG4G18340 Aethionema arabicum HOM05D006223 ORTHO05D009080 1.0e-30 137.9 206 41.3
A03p47580 Brassica napus HOM05D006223 ORTHO05D009080 4.3e-29 132.5 205 42.4
Hma1.2p1_0852F.1_g228470 Hydrangea macrophylla HOM05D006223 ORTHO05D009080 1.6e-28 130.6 114 57.9
BraA03t13871Z Brassica rapa HOM05D006223 ORTHO05D009080 2.4e-27 126.7 205 41.0
C07p45560 Brassica napus HOM05D006223 ORTHO05D009080 4.4e-26 122.5 160 45.6
BolC7t45077H Brassica oleracea HOM05D006223 ORTHO05D009080 4.4e-26 122.5 160 45.6
Sc16g0002890 Simmondsia chinensis HOM05D006223 ORTHO05D009080 1.9e-24 117.1 149 49.0
CSS0032370 Camellia sinensis var. sinensis HOM05D006223 ORTHO05D009080 2.5e-21 106.7 94 60.6
EL10Ac6g15621 Beta vulgaris HOM05D006223 ORTHO05D009080 1.8e-19 100.5 197 34.5
SEGI_10369 Sequoiadendron giganteum HOM05D006223 ORTHO05D009080 2.0e-18 97.1 168 38.1
COL.COLO4_11574 Corchorus olitorius HOM05D006223 ORTHO05D009080 7.6e-18 95.1 142 41.5
unitig_21.g20422 Utricularia gibba HOM05D005082 ORTHO05D006474 2.4e-16 90.1 187 38.5
SHI12778 Sapria himalayana HOM05D006223 ORTHO05D009080 4.6e-15 85.9 207 32.9
AagrBONN_evm.TU.Sc2ySwM_228.3102 Anthoceros agrestis HOM05D004796 ORTHO05D006527 1.1e-11 74.7 173 32.9
BolC8t50110H Brassica oleracea HOM05D006223 ORTHO05D009080 1.8e-11 73.9 166 31.9
C08p24920 Brassica napus HOM05D006223 ORTHO05D009080 3.1e-11 73.2 164 31.1
FAN23G0832 Fragaria x ananassa HOM05D006223 ORTHO05D009080 6.9e-11 72.0 130 38.5
CSS0023916 Camellia sinensis var. sinensis HOM05D006223 ORTHO05D009080 1.5e-10 70.9 53 62.3
HPP92_024909 Vanilla planifolia HOM05D006223 ORTHO05D009080 1.7e-09 67.4 213 31.0
Pp3c5_6560 Physcomitrium patens HOM05D006223 ORTHO05D009080 4.9e-09 65.9 234 30.3
BcaB05g23172 Brassica carinata HOM05D006223 ORTHO05D009080 8.7e-06 55.1 131 35.1


User provided reference genes

Program Settings