Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.23511 Avicennia marina HOM05D004708 ORTHO05D005573 1.2e-92 343.2 179 100.0
SalBow6G2211 Salvia bowleyana HOM05D004708 ORTHO05D005573 1.0e-75 287.0 172 87.2
Dinv13509 Davidia involucrata HOM05D004708 ORTHO05D005573 2.4e-72 275.8 168 81.5
SGA_v2.0_scaffold258G45779 Striga asiatica HOM05D004708 ORTHO05D005573 3.1e-72 275.4 178 80.3
Cc07_g09720 Coffea canephora HOM05D004708 ORTHO05D005573 3.4e-71 271.9 163 83.4
Migut.H00962 Erythranthe guttata HOM05D004708 ORTHO05D005573 8.4e-70 267.3 160 84.4
vmacro17822 Vaccinium macrocarpon HOM05D004708 ORTHO05D005573 1.1e-69 266.9 171 78.4
Peaxi162Scf00008g03516 Petunia axillaris HOM05D004708 ORTHO05D005573 1.9e-69 266.2 177 76.3
Hund16439 Selenicereus undatus HOM05D004708 ORTHO05D005573 7.1e-69 264.2 163 77.3
Cpa.g.sc6.137 Carica papaya HOM05D004708 ORTHO05D005573 1.6e-68 263.1 163 79.8
HanXRQChr09g0261341 Helianthus annuus HOM05D004708 ORTHO05D005573 1.6e-68 263.1 165 81.2
Actinidia19193 Actinidia chinensis HOM05D004708 ORTHO05D005573 3.5e-68 261.9 171 77.2
CSS0040556 Camellia sinensis var. sinensis HOM05D004708 ORTHO05D005573 7.9e-68 260.8 167 77.8
Rhsim08G0118600 Rhododendron simsii HOM05D004708 ORTHO05D005573 7.9e-68 260.8 171 77.8
Hma1.2p1_0224F.1_g094553 Hydrangea macrophylla HOM05D004708 ORTHO05D005573 2.3e-67 259.2 172 76.2
Nitab4.5_0000136g0310 Nicotiana tabacum HOM05D004708 ORTHO05D005573 2.3e-67 259.2 170 75.9
QL06p046600 Quercus lobata HOM05D004708 ORTHO05D005573 3.0e-67 258.8 164 79.9
unitig_21.g20250 Utricularia gibba HOM05D004708 ORTHO05D005573 3.0e-67 258.8 168 79.2
GSVIVG01018936001 Vitis vinifera HOM05D004708 ORTHO05D005573 3.9e-67 258.5 161 78.3
GSVIVG01025946001 Vitis vinifera HOM05D004708 ORTHO05D005573 6.7e-67 257.7 163 79.1
Ciclev10026600m.g Citrus clementina HOM05D004708 ORTHO05D005573 1.5e-66 256.5 168 79.2
PGSC0003DMG400015508 Solanum tuberosum HOM05D004708 ORTHO05D005573 1.9e-66 256.1 170 75.3
Hma1.2p1_0789F.1_g218250 Hydrangea macrophylla HOM05D004708 ORTHO05D005573 2.5e-66 255.8 178 75.3
Solyc02g062640.4 Solanum lycopersicum HOM05D004708 ORTHO05D005573 5.6e-66 254.6 162 78.4
CAN.G111.48 Capsicum annuum HOM05D004708 ORTHO05D005573 7.4e-66 254.2 161 78.3
Sopen02g013670 Solanum pennellii HOM05D004708 ORTHO05D005573 7.4e-66 254.2 162 77.8
ECA232G2192 Erigeron canadensis HOM05D004708 ORTHO05D005573 9.6e-66 253.8 164 79.3
Atru.chr3.607 Acer truncatum HOM05D004708 ORTHO05D005573 1.6e-65 253.1 158 79.1
Thecc.03G010200 Theobroma cacao HOM05D004708 ORTHO05D005573 2.1e-65 252.7 158 79.7
EL10Ac6g15543 Beta vulgaris HOM05D004708 ORTHO05D005573 3.7e-65 251.9 174 73.6
Lsat_1_v5_gn_4_148240 Lactuca sativa HOM05D004708 ORTHO05D005573 4.8e-65 251.5 162 77.2
Manes.01G136850 Manihot esculenta HOM05D004708 ORTHO05D005573 4.8e-65 251.5 168 75.0
CSS0030971 Camellia sinensis var. sinensis HOM05D004708 ORTHO05D005573 6.2e-65 251.1 171 74.3
Sc16g0002660 Simmondsia chinensis HOM05D004708 ORTHO05D005573 6.2e-65 251.1 174 71.8
CiPaw.01G043700 Carya illinoinensis HOM05D004708 ORTHO05D005573 8.1e-65 250.8 166 77.1
Gorai.008G067200 Gossypium raimondii HOM05D004708 ORTHO05D005573 1.1e-64 250.4 164 76.8
AUR62004070 Chenopodium quinoa HOM05D004708 ORTHO05D005573 1.4e-64 250.0 160 75.6
COL.COLO4_34048 Corchorus olitorius HOM05D004708 ORTHO05D005573 1.4e-64 250.0 162 76.5
AUR62007583 Chenopodium quinoa HOM05D004708 ORTHO05D005573 1.8e-64 249.6 160 76.2
AT2G18250 Arabidopsis thaliana HOM05D004708 ORTHO05D005573 2.4e-64 249.2 161 75.2
Duzib084G0089 Durio zibethinus HOM05D004708 ORTHO05D005573 2.4e-64 249.2 163 76.7
AL3G51520 Arabidopsis lyrata HOM05D004708 ORTHO05D005573 4.0e-64 248.4 164 73.8
Gohir.A09G170800 Gossypium hirsutum HOM05D004708 ORTHO05D005573 4.0e-64 248.4 168 75.6
CAN.G1645.15 Capsicum annuum HOM05D004708 ORTHO05D005573 5.3e-64 248.1 158 78.5
Carub.0003s3243 Capsella rubella HOM05D004708 ORTHO05D005573 1.2e-63 246.9 164 73.2
Gorai.006G188300 Gossypium raimondii HOM05D004708 ORTHO05D005573 1.2e-63 246.9 168 75.6
TWI53G1618 Tripterygium wilfordii HOM05D004708 ORTHO05D005573 1.5e-63 246.5 157 77.1
MD02G1144700 Malus domestica HOM05D004708 ORTHO05D005573 2.0e-63 246.1 168 75.0
Potri.005G121200 Populus trichocarpa HOM05D004708 ORTHO05D005573 2.6e-63 245.7 164 76.2
Prupe.7G156900 Prunus persica HOM05D004708 ORTHO05D005573 4.5e-63 245.0 173 74.0
Thhalv10022875m.g Eutrema salsugineum HOM05D004708 ORTHO05D005573 5.8e-63 244.6 164 72.6
ClCG05G006010 Citrullus lanatus HOM05D000319 ORTHO05D000903 1.0e-62 243.8 165 73.9
DCAR_023857 Daucus carota HOM05D004708 ORTHO05D005573 1.0e-62 243.8 162 74.1
MD15G1258400 Malus domestica HOM05D004708 ORTHO05D005573 1.3e-62 243.4 162 75.3
Aa31LG8G15760 Aethionema arabicum HOM05D004708 ORTHO05D005573 1.7e-62 243.0 169 71.0
BcaC04g22917 Brassica carinata HOM05D004708 ORTHO05D005573 1.7e-62 243.0 160 72.5
Duzib264G1087 Durio zibethinus HOM05D004708 ORTHO05D005573 1.7e-62 243.0 158 75.9
Thecc.01G032800 Theobroma cacao HOM05D004708 ORTHO05D005573 1.7e-62 243.0 158 75.3
Aqoxy3G01739 Aquilegia oxysepala HOM05D004708 ORTHO05D005573 2.9e-62 242.3 158 73.4
Manes.02G095600 Manihot esculenta HOM05D004708 ORTHO05D005573 2.9e-62 242.3 168 73.8
BolC9t54282H Brassica oleracea HOM05D004708 ORTHO05D005573 3.8e-62 241.9 160 71.9
BcaB07g31677 Brassica carinata HOM05D004708 ORTHO05D005573 4.9e-62 241.5 159 72.3
Sp3g31670 Schrenkiella parvula HOM05D004708 ORTHO05D005573 4.9e-62 241.5 164 71.3
CARHR108820 Cardamine hirsuta HOM05D004708 ORTHO05D005573 6.5e-62 241.1 164 72.0
COL.COLO4_22050 Corchorus olitorius HOM05D004708 ORTHO05D005573 1.4e-61 240.0 174 71.3
A07p02450 Brassica napus HOM05D004708 ORTHO05D005573 2.5e-61 239.2 170 67.6
BraA07t28041Z Brassica rapa HOM05D004708 ORTHO05D005573 2.5e-61 239.2 170 67.6
CsaV3_3G014460 Cucumis sativus L. HOM05D004708 ORTHO05D005573 2.5e-61 239.2 166 73.5
Hund13990 Selenicereus undatus HOM05D004708 ORTHO05D005573 2.5e-61 239.2 173 68.2
BcaC06g36391 Brassica carinata HOM05D004708 ORTHO05D005573 4.2e-61 238.4 170 68.2
BcaB03g16615 Brassica carinata HOM05D004708 ORTHO05D005573 7.1e-61 237.7 161 72.0
PGR119G0658 Punica granatum HOM05D004708 ORTHO05D005573 7.1e-61 237.7 165 73.3
DCAR_032374 Daucus carota HOM05D004708 ORTHO05D005573 9.3e-61 237.3 170 70.0
Aqoxy5G01592 Aquilegia oxysepala HOM05D004708 ORTHO05D005573 2.1e-60 236.1 151 76.8
MELO3C006648.2 Cucumis melo HOM05D004708 ORTHO05D005573 2.1e-60 236.1 165 71.5
BolC7t40861H Brassica oleracea HOM05D004708 ORTHO05D005573 4.6e-60 235.0 170 67.6
FvH4_1g13011 Fragaria vesca HOM05D004708 ORTHO05D005573 4.6e-60 235.0 172 69.2
C07p04600 Brassica napus HOM05D004708 ORTHO05D005573 1.0e-59 233.8 170 67.1
Lsat_1_v5_gn_2_77221 Lactuca sativa HOM05D004708 ORTHO05D005573 1.8e-59 233.0 161 72.7
ATR0796G251 Amborella trichopoda HOM05D004708 ORTHO05D005573 2.3e-59 232.6 161 72.7
RcHm_v2.0_Chr2g0101171 Rosa chinensis HOM05D004708 ORTHO05D005573 1.5e-58 229.9 162 69.8
ECA238G4849 Erigeron canadensis HOM05D004708 ORTHO05D005573 1.9e-58 229.6 162 70.4
SEGI_37374 Sequoiadendron giganteum HOM05D004708 ORTHO05D005573 7.4e-58 227.6 167 71.3
PSO764G0091 Papaver somniferum HOM05D004708 ORTHO05D005573 2.1e-57 226.1 153 72.5
Zm00001eb231510 Zea mays HOM05D004708 ORTHO05D005573 2.1e-57 226.1 152 71.1
Medtr8g073890 Medicago truncatula HOM05D004708 ORTHO05D005573 1.4e-56 223.4 156 72.4
PSO339G0290 Papaver somniferum HOM05D004708 ORTHO05D005573 3.1e-56 222.2 162 68.5
TAR624G0473 Trochodendron aralioides HOM05D004708 ORTHO05D005573 3.1e-56 222.2 161 72.0
Lj2g0001027 Lotus japonicus HOM05D002605 ORTHO05D002842 4.0e-56 221.9 159 70.4
THA.LOC104807464 Tarenaya hassleriana HOM05D004708 ORTHO05D005573 4.0e-56 221.9 188 61.2
MD15G1258500 Malus domestica HOM05D004708 ORTHO05D005573 5.3e-56 221.5 164 67.7
Ca_24863_v3 Cicer arietinum L. HOM05D004708 ORTHO05D005573 6.9e-56 221.1 159 70.4
VMungo1215G3002 Vigna mungo HOM05D004708 ORTHO05D005573 6.9e-56 221.1 156 70.5
Os07g0179400 Oryza sativa ssp. japonica HOM05D004708 ORTHO05D005573 9.0e-56 220.7 149 73.2
Hma1.2p1_1820F.1_g304110 Hydrangea macrophylla HOM05D004708 ORTHO05D005573 1.5e-55 219.9 139 77.7
arahy.Tifrunner.gnm1.ann1.Y7U3HW Arachis hypogaea HOM05D004708 ORTHO05D005573 2.6e-55 219.2 156 69.9
arahy.Tifrunner.gnm1.ann1.CZ32YF Arachis hypogaea HOM05D004708 ORTHO05D005573 3.4e-55 218.8 159 69.2
arahy.Tifrunner.gnm1.ann1.V6C6W3 Arachis hypogaea HOM05D004708 ORTHO05D005573 3.4e-55 218.8 156 70.5
Medtr5g020680 Medicago truncatula HOM05D004708 ORTHO05D005573 3.4e-55 218.8 159 69.2
Dinv39998 Davidia involucrata HOM05D004708 ORTHO05D005573 7.6e-55 217.6 170 67.6
Lalb_Chr05g0212721 Lupinus albus HOM05D004708 ORTHO05D005573 1.3e-54 216.9 166 65.7
Sabra05G0099900 Salix brachista HOM05D004708 ORTHO05D005573 2.2e-54 216.1 209 58.9
Ca_21297_v3 Cicer arietinum L. HOM05D004708 ORTHO05D005573 2.9e-54 215.7 159 68.6
Phvul.002G032200 Phaseolus vulgaris HOM05D004708 ORTHO05D005573 2.9e-54 215.7 159 67.9
Psat2g158360 Pisum sativum HOM05D004708 ORTHO05D005573 3.8e-54 215.3 159 67.9
Glyma.01G173050 Glycine max HOM05D004708 ORTHO05D005573 8.4e-54 214.2 155 68.4
FAN25G0668 Fragaria x ananassa HOM05D004708 ORTHO05D005573 1.9e-53 213.0 168 64.3
TPR.G2405 Trifolium pratense HOM05D004708 ORTHO05D005573 1.9e-53 213.0 159 67.3
Gohir.A12G064100 Gossypium hirsutum HOM05D004708 ORTHO05D005573 7.1e-53 211.1 164 68.9
CDE12G0116 Ceratophyllum demersum HOM05D004708 ORTHO05D005573 9.3e-53 210.7 165 67.3
FAN19G0555 Fragaria x ananassa HOM05D004708 ORTHO05D005573 2.7e-52 209.1 205 57.6
HPP92_014750 Vanilla planifolia HOM05D004708 ORTHO05D005573 7.9e-52 207.6 146 70.5
arahy.Tifrunner.gnm1.ann1.KFYL3R Arachis hypogaea HOM05D004708 ORTHO05D005573 1.3e-51 206.8 159 67.3
CDE01G0816 Ceratophyllum demersum HOM05D004708 ORTHO05D005573 1.8e-51 206.5 152 70.4
FAN21G0333 Fragaria x ananassa HOM05D004708 ORTHO05D005573 1.5e-50 203.4 172 60.5
Gohir.D09G166500 Gossypium hirsutum HOM05D004708 ORTHO05D005573 9.7e-50 200.7 163 67.5
Pp3c18_16890 Physcomitrium patens HOM05D004708 ORTHO05D005573 2.4e-48 196.1 156 63.5
SMO357G0013 Selaginella moellendorffii HOM05D004708 ORTHO05D005573 3.1e-48 195.7 155 64.5
SMO318G0001 Selaginella moellendorffii HOM05D004708 ORTHO05D005573 9.0e-48 194.1 171 59.6
BcaC04g22919 Brassica carinata HOM05D004708 ORTHO05D005573 2.0e-47 193.0 188 54.3
C09p13900 Brassica napus HOM05D004708 ORTHO05D005573 3.8e-46 188.7 162 61.1
Glyma.02G276900 Glycine max HOM05D004708 ORTHO05D005573 3.8e-46 188.7 131 67.2
A09p11790 Brassica napus HOM05D004708 ORTHO05D005573 1.6e-44 183.3 128 69.5
CARHR108850 Cardamine hirsuta HOM05D004708 ORTHO05D005573 1.0e-43 180.6 119 73.1
FvH4_3g26020 Fragaria vesca HOM05D004708 ORTHO05D005573 6.7e-43 177.9 139 62.6
Lj2A454G55 Lonicera japonica HOM05D004708 ORTHO05D005573 5.7e-42 174.9 143 65.7
Mapoly0065s0018 Marchantia polymorpha HOM05D004708 ORTHO05D005573 9.7e-42 174.1 156 59.0
Nitab4.5_0009165g0010 Nicotiana tabacum HOM05D000001 ORTHO05D013582 1.3e-41 173.7 112 79.5
CSS0019358 Camellia sinensis var. sinensis HOM05D004708 ORTHO05D005573 2.8e-41 172.6 115 77.4
Peaxi162Scf00130g00618 Petunia axillaris HOM05D004708 ORTHO05D005573 8.2e-41 171.0 169 55.6
Gohir.D12G064000 Gossypium hirsutum HOM05D004708 ORTHO05D005573 1.4e-40 170.2 112 72.3
Zm00001eb301320 Zea mays HOM05D004708 ORTHO05D005573 1.5e-39 166.8 150 58.7
PSO731G0046 Papaver somniferum HOM05D004708 ORTHO05D005573 9.4e-37 157.5 109 71.6
Os02g0134000 Oryza sativa ssp. japonica HOM05D004708 ORTHO05D005573 2.3e-35 152.9 114 69.3
FAN11G2897 Fragaria x ananassa HOM05D004708 ORTHO05D009899 3.0e-35 152.5 169 52.1
CBR_g4476 Chara braunii HOM05D003322 ORTHO05D004228 3.9e-35 152.1 161 49.7
PSO384G2349 Papaver somniferum HOM05D004708 ORTHO05D005573 5.1e-35 151.8 162 53.1
Nn7g38122 Nelumbo nucifera HOM05D004708 ORTHO05D005573 3.3e-34 149.1 98 71.4
CAN.G2875.1 Capsicum annuum HOM05D004708 ORTHO05D005573 1.7e-30 136.7 90 78.9
BraA09t36827Z Brassica rapa HOM05D004708 ORTHO05D005573 6.5e-30 134.8 99 68.7
Actinidia33865 Actinidia chinensis HOM05D004708 ORTHO05D005573 4.2e-29 132.1 92 76.1
AagrBONN_evm.TU.Sc2ySwM_228.2017 Anthoceros agrestis HOM05D004708 ORTHO05D005573 4.4e-26 122.1 113 57.5
Pp3c18_18790 Physcomitrium patens HOM05D004708 ORTHO05D005573 6.3e-25 118.2 156 44.2
FAN26G2067 Fragaria x ananassa HOM05D004708 ORTHO05D005573 4.5e-23 112.1 79 67.1
SGA_v2.0_scaffold276G46612 Striga asiatica HOM05D004708 ORTHO05D005573 2.5e-21 106.3 113 57.5
Cre13.g590550 Chlamydomonas reinhardtii HOM05D004708 ORTHO05D005573 5.5e-21 105.1 175 36.0
arahy.Tifrunner.gnm1.ann1.W5EA8A Arachis hypogaea HOM05D004708 ORTHO05D005573 2.1e-20 103.2 88 64.8
HanXRQChr17g0534461 Helianthus annuus HOM05D004708 ORTHO05D005573 3.0e-19 99.4 63 77.8
AagrBONN_evm.TU.Sc2ySwM_368.1168 Anthoceros agrestis HOM05D004708 ORTHO05D005573 9.8e-18 94.4 69 66.7
CAN.G53.14 Capsicum annuum HOM05D004708 ORTHO05D005573 8.3e-17 91.3 58 72.4
C09p74780 Brassica napus HOM05D004708 ORTHO05D005573 7.0e-16 88.2 59 71.2
C09p74830 Brassica napus HOM05D004708 ORTHO05D005573 7.0e-16 88.2 59 71.2
CAN.G53.15 Capsicum annuum HOM05D004708 ORTHO05D005573 2.7e-15 86.3 53 86.8
MCO08G231 Micromonas commoda HOM05D004708 ORTHO05D005573 3.5e-15 85.9 152 36.2
BcaC06g36392 Brassica carinata HOM05D000492 ORTHO05D005571 5.5e-13 78.6 61 65.6
Oeu044133.1 Olea europaea HOM05D004708 ORTHO05D005573 8.0e-12 74.7 44 79.5
PRCOL_00004729 Prasinoderma coloniale HOM05D004708 ORTHO05D005573 1.5e-10 70.5 151 31.8
Cfa027114 Carpinus fangiana HOM05D004708 ORTHO05D005573 2.6e-10 69.7 187 26.7
Actinidia12710 Actinidia chinensis HOM05D004708 ORTHO05D005573 3.1e-08 62.8 48 62.5


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