Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.23496 Avicennia marina HOM05D008075 ORTHO05D010208 2.0e-292 1008.4 531 100.0
SalBow1G7185 Salvia bowleyana HOM05D008075 ORTHO05D010208 5.7e-90 335.9 591 45.2
SGA_v2.0_scaffold54G19596 Striga asiatica HOM05D008075 ORTHO05D010208 3.8e-86 323.2 556 44.6
Oeu011019.1 Olea europaea HOM05D002427 ORTHO05D002818 1.2e-68 265.0 538 38.3
Migut.H00807 Erythranthe guttata HOM05D008075 ORTHO05D010208 6.4e-57 226.1 543 39.6
Cc02_g33950 Coffea canephora HOM05D008075 ORTHO05D010208 6.2e-44 183.0 632 31.5
CAN.G630.6 Capsicum annuum HOM05D008075 ORTHO05D010208 8.9e-43 179.1 580 33.3
PGSC0003DMG400022727 Solanum tuberosum HOM05D008075 ORTHO05D010208 1.2e-42 178.7 591 33.5
Solyc08g080000.3 Solanum lycopersicum HOM05D008075 ORTHO05D010208 8.4e-41 172.6 562 32.4
Sopen08g028360 Solanum pennellii HOM05D008075 ORTHO05D010208 2.1e-39 167.9 572 31.3
Dinv08171 Davidia involucrata HOM05D008075 ORTHO05D010208 1.3e-38 165.2 666 29.9
Nitab4.5_0000947g0070 Nicotiana tabacum HOM05D008075 ORTHO05D010208 7.3e-37 159.5 606 31.0
Nitab4.5_0005586g0040 Nicotiana tabacum HOM05D008075 ORTHO05D010208 6.4e-33 146.4 613 30.0
Peaxi162Scf00658g00065 Petunia axillaris HOM05D008075 ORTHO05D010208 8.4e-33 146.0 610 29.8
CSS0037312 Camellia sinensis var. sinensis HOM05D008075 ORTHO05D010208 3.5e-23 114.0 581 27.2
Rhsim08G0001000 Rhododendron simsii HOM05D008075 ORTHO05D010208 1.8e-22 111.7 646 26.8
GSVIVG01022404001 Vitis vinifera HOM05D008075 ORTHO05D010208 2.0e-18 98.2 635 26.0
TAR376G0152 Trochodendron aralioides HOM05D008075 ORTHO05D010208 3.0e-14 84.3 400 26.8
TWI75G0788 Tripterygium wilfordii HOM05D008075 ORTHO05D010208 1.5e-13 82.0 630 24.9
Potri.004G140000 Populus trichocarpa HOM05D008075 ORTHO05D010208 4.8e-12 77.0 665 25.7
QL10p040186 Quercus lobata HOM05D008075 ORTHO05D010208 1.3e-09 68.9 331 27.8
Sabra04G0092100 Salix brachista HOM05D008075 ORTHO05D010208 9.3e-08 62.8 653 23.0
PSO170G3563 Papaver somniferum HOM05D008075 ORTHO05D010208 2.3e-06 58.2 263 29.7
CiPaw.03G254600 Carya illinoinensis HOM05D008075 ORTHO05D010208 3.9e-06 57.4 316 27.2
Nn1g08564 Nelumbo nucifera HOM05D008075 ORTHO05D010208 5.1e-06 57.0 104 45.2


User provided reference genes

Program Settings