Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.23472 Avicennia marina HOM05D003347 ORTHO05D003821 8.1e-77 291.2 266 100.0
Migut.H00863 Erythranthe guttata HOM05D003347 ORTHO05D003821 3.7e-29 132.9 243 67.5
Oeu037839.1 Olea europaea HOM05D003347 ORTHO05D003821 3.1e-28 129.8 258 64.3
Hund07201 Selenicereus undatus HOM05D003347 ORTHO05D003821 3.8e-26 122.9 257 55.6
Solyc05g056460.4 Solanum lycopersicum HOM05D003347 ORTHO05D003821 2.6e-22 110.2 195 64.6
TAR381G0729 Trochodendron aralioides HOM05D003347 ORTHO05D003821 1.8e-20 104.0 198 57.6
CSS0039803 Camellia sinensis var. sinensis HOM05D003347 ORTHO05D003821 4.1e-20 102.8 199 55.8
Dinv34344 Davidia involucrata HOM05D003347 ORTHO05D003821 1.5e-19 100.9 198 61.1
TWI31G0129 Tripterygium wilfordii HOM05D003347 ORTHO05D003821 1.5e-19 100.9 258 47.7
PGSC0003DMG400023323 Solanum tuberosum HOM05D003347 ORTHO05D003821 2.6e-19 100.1 195 63.6
PSO063G2612 Papaver somniferum HOM05D003347 ORTHO05D003821 2.2e-18 97.1 258 52.3
TAR376G0009 Trochodendron aralioides HOM05D003347 ORTHO05D003821 2.9e-18 96.7 261 48.7
RcHm_v2.0_Chr2g0123211 Rosa chinensis HOM05D003347 ORTHO05D003821 5.5e-17 92.4 126 75.4
Hma1.2p1_0217F.1_g092040 Hydrangea macrophylla HOM05D003347 ORTHO05D003821 9.4e-17 91.7 198 57.1
Lj6g0014149 Lotus japonicus HOM05D003347 ORTHO05D003821 2.1e-16 90.5 202 48.5
TAR628G0882 Trochodendron aralioides HOM05D003347 ORTHO05D003821 2.7e-16 90.1 196 51.5
Cfa002207 Carpinus fangiana HOM05D003347 ORTHO05D003821 4.7e-16 89.4 153 47.1
QL10p039663 Quercus lobata HOM05D003347 ORTHO05D003821 4.7e-16 89.4 77 71.4
TWI79G0161 Tripterygium wilfordii HOM05D003347 ORTHO05D003821 1.8e-15 87.4 267 49.8
unitig_60.g25508 Utricularia gibba HOM05D003347 ORTHO05D003821 1.8e-15 87.4 138 62.3
TWI14G1287 Tripterygium wilfordii HOM05D003347 ORTHO05D003821 9.7e-14 81.6 199 50.3
Duzib132G0710 Durio zibethinus HOM05D003347 ORTHO05D003821 2.2e-13 80.5 199 55.8
Rhsim10G0131200 Rhododendron simsii HOM05D003347 ORTHO05D003821 2.2e-13 80.5 258 60.1
Sopen05g034850 Solanum pennellii HOM05D003347 ORTHO05D003821 2.2e-13 80.5 191 60.2
CANSAT11G2200 Cannabis sativa HOM05D003347 ORTHO05D003821 2.8e-13 80.1 199 55.3
ATR0684G168 Amborella trichopoda HOM05D003347 ORTHO05D003821 3.7e-13 79.7 196 54.6
Nn5g28237 Nelumbo nucifera HOM05D003347 ORTHO05D003821 3.7e-13 79.7 197 48.7
PGR102G0439 Punica granatum HOM05D003347 ORTHO05D003821 3.7e-13 79.7 201 54.7
MBI03_g33029_MAGBIO Magnolia biondii HOM05D003347 ORTHO05D003821 4.8e-13 79.3 237 55.7
Sc09g0002030 Simmondsia chinensis HOM05D003347 ORTHO05D003821 4.8e-13 79.3 141 62.4
CSS0030084 Camellia sinensis var. sinensis HOM05D003347 ORTHO05D003821 6.3e-13 79.0 191 49.7
Haze_25385 Corylus avellana HOM05D003347 ORTHO05D003821 1.1e-12 78.2 137 50.4
Gohir.A09G006400 Gossypium hirsutum HOM05D003347 ORTHO05D003821 1.1e-12 78.2 141 63.1
Lj1g0014274 Lotus japonicus HOM05D003347 ORTHO05D003821 1.4e-12 77.8 77 62.3
Phvul.009G151400 Phaseolus vulgaris HOM05D003347 ORTHO05D003821 1.8e-12 77.4 73 63.0
Gohir.A04G127400 Gossypium hirsutum HOM05D003347 ORTHO05D003821 4.1e-12 76.3 198 52.5
PGR042G0677 Punica granatum HOM05D003347 ORTHO05D003821 4.1e-12 76.3 199 55.3
HPP92_009365 Vanilla planifolia HOM05D003347 ORTHO05D003821 4.1e-12 76.3 191 48.2
Eucgr.H05071 Eucalyptus grandis HOM05D003347 ORTHO05D003821 1.2e-11 74.7 267 57.3
Lalb_Chr11g0068781 Lupinus albus HOM05D003347 ORTHO05D003821 1.6e-11 74.3 70 65.7
GSVIVG01022926001 Vitis vinifera HOM05D003347 ORTHO05D003821 1.6e-11 74.3 196 52.6
Dinv05136 Davidia involucrata HOM05D000040 ORTHO05D000267 2.0e-11 73.9 156 64.1
Gorai.006G007100 Gossypium raimondii HOM05D003347 ORTHO05D003821 2.0e-11 73.9 141 61.7
Glyma.06G158900 Glycine max HOM05D003347 ORTHO05D003821 2.6e-11 73.6 79 57.0
Nitab4.5_0000496g0140 Nicotiana tabacum HOM05D003347 ORTHO05D003821 2.6e-11 73.6 221 54.3
MD15G1423300 Malus domestica HOM05D003347 ORTHO05D003821 3.5e-11 73.2 75 57.3
VMungo1309G3119 Vigna mungo HOM05D003347 ORTHO05D003821 3.5e-11 73.2 77 61.0
Gohir.D04G172100 Gossypium hirsutum HOM05D003347 ORTHO05D003821 4.5e-11 72.8 198 52.0
Sed0005094 Sechium edule HOM05D003347 ORTHO05D003821 4.5e-11 72.8 197 53.3
Thecc.02G038200 Theobroma cacao HOM05D003347 ORTHO05D003821 4.5e-11 72.8 201 52.2
CSS0043936 Camellia sinensis var. sinensis HOM05D003347 ORTHO05D003821 5.9e-11 72.4 194 48.5
Lj9C306T9 Lonicera japonica HOM05D003347 ORTHO05D003821 5.9e-11 72.4 73 58.9
Sed0017913 Sechium edule HOM05D003347 ORTHO05D003821 5.9e-11 72.4 72 59.7
Sc03g0004210 Simmondsia chinensis HOM05D003347 ORTHO05D003821 5.9e-11 72.4 186 50.5
Aqoxy6G00189 Aquilegia oxysepala HOM05D003347 ORTHO05D003821 7.7e-11 72.0 194 52.1
HanXRQChr01g0017031 Helianthus annuus HOM05D003347 ORTHO05D003821 7.7e-11 72.0 70 67.1
Cpa.g.sc37.62 Carica papaya HOM05D003347 ORTHO05D003821 1.0e-10 71.6 72 56.9
AUR62006920 Chenopodium quinoa HOM05D003347 ORTHO05D003821 1.0e-10 71.6 139 56.1
Medtr2g007150 Medicago truncatula HOM05D003347 ORTHO05D003821 1.0e-10 71.6 71 73.2
AUR62014268 Chenopodium quinoa HOM05D003347 ORTHO05D003821 1.3e-10 71.2 194 45.4
Haze_01671 Corylus avellana HOM05D003347 ORTHO05D003821 1.3e-10 71.2 146 45.9
AUR62042720 Chenopodium quinoa HOM05D003347 ORTHO05D003821 1.7e-10 70.9 93 48.4
TPR.G28695 Trifolium pratense HOM05D003347 ORTHO05D003821 2.2e-10 70.5 75 57.3
arahy.Tifrunner.gnm1.ann1.N22SFW Arachis hypogaea HOM05D003347 ORTHO05D003821 2.9e-10 70.1 200 51.0
COL.COLO4_12116 Corchorus olitorius HOM05D012218 ORTHO05D003821 3.8e-10 69.7 71 59.2
Gorai.008G042400 Gossypium raimondii HOM05D003347 ORTHO05D003821 5.0e-10 69.3 199 54.3
Psat5g058080 Pisum sativum HOM05D003347 ORTHO05D003821 5.0e-10 69.3 130 41.5
Dinv24283 Davidia involucrata HOM05D003347 ORTHO05D003821 6.5e-10 68.9 92 58.7
Potri.001G211000 Populus trichocarpa HOM05D003347 ORTHO05D003821 6.5e-10 68.9 179 53.6
Atru.chr6.636 Acer truncatum HOM05D003347 ORTHO05D003821 8.5e-10 68.6 92 48.9
Lalb_Chr18g0060901 Lupinus albus HOM05D003347 ORTHO05D003821 1.5e-09 67.8 196 51.0
SGA_v2.0_scaffold1G00306 Striga asiatica HOM05D003347 ORTHO05D003821 1.9e-09 67.4 120 46.7
Gohir.D09G005500 Gossypium hirsutum HOM05D003347 ORTHO05D003821 2.5e-09 67.0 141 59.6
Prupe.4G280500 Prunus persica HOM05D003347 ORTHO05D003821 3.2e-09 66.6 95 73.7
VMungo0540G0141 Vigna mungo HOM05D003347 ORTHO05D003821 3.2e-09 66.6 201 53.7
MELO3C014381.2 Cucumis melo HOM05D003347 ORTHO05D003821 4.2e-09 66.2 198 51.5
Lj4A831G75 Lonicera japonica HOM05D003347 ORTHO05D003821 4.2e-09 66.2 47 76.6
Cc02_g22510 Coffea canephora HOM05D003347 ORTHO05D003821 5.5e-09 65.9 76 68.4
MELO3C023199.2 Cucumis melo HOM05D003347 ORTHO05D003821 5.5e-09 65.9 47 76.6
Phvul.006G214600 Phaseolus vulgaris HOM05D003347 ORTHO05D003821 5.5e-09 65.9 149 48.3
Atru.chr4.1125 Acer truncatum HOM05D003347 ORTHO05D003821 7.2e-09 65.5 198 51.0
CDE08G0312 Ceratophyllum demersum HOM05D003347 ORTHO05D003821 7.2e-09 65.5 195 47.7
Lsat_1_v5_gn_1_80721 Lactuca sativa HOM05D002427 ORTHO05D002818 9.4e-09 65.1 158 43.7
Psat5g058160 Pisum sativum HOM05D003347 ORTHO05D003821 9.4e-09 65.1 71 56.3
TWI59G0889 Tripterygium wilfordii HOM05D003347 ORTHO05D003821 1.2e-08 64.7 90 52.2
CDE06G2684 Ceratophyllum demersum HOM05D003347 ORTHO05D003821 1.6e-08 64.3 197 44.7
ECA236G0662 Erigeron canadensis HOM05D003347 ORTHO05D003821 1.6e-08 64.3 246 53.7
Potri.019G001900 Populus trichocarpa HOM05D003347 ORTHO05D003821 1.6e-08 64.3 159 56.0
Thecc.01G142300 Theobroma cacao HOM05D003347 ORTHO05D003821 1.6e-08 64.3 148 53.4
Gohir.A12G031700 Gossypium hirsutum HOM05D003347 ORTHO05D003821 2.1e-08 63.9 197 50.3
Gorai.012G161200 Gossypium raimondii HOM05D003347 ORTHO05D003821 2.1e-08 63.9 196 51.0
vmacro12779 Vaccinium macrocarpon HOM05D003347 ORTHO05D003821 2.1e-08 63.9 110 61.8
Nitab4.5_0013117g0020 Nicotiana tabacum HOM05D003347 ORTHO05D003821 2.7e-08 63.5 150 56.7
vmacro01761 Vaccinium macrocarpon HOM05D003347 ORTHO05D003821 2.7e-08 63.5 74 51.4
Gohir.D12G040600 Gossypium hirsutum HOM05D003347 ORTHO05D003821 3.6e-08 63.2 150 54.7
HanXRQChr03g0071751 Helianthus annuus HOM05D003347 ORTHO05D003821 3.6e-08 63.2 78 46.2
TPR.G2109 Trifolium pratense HOM05D003347 ORTHO05D003821 3.6e-08 63.2 72 70.8
QL11p018508 Quercus lobata HOM05D003347 ORTHO05D003821 4.7e-08 62.8 75 64.0
CiPaw.03G114900 Carya illinoinensis HOM05D003347 ORTHO05D003821 6.1e-08 62.4 111 68.5
Lsat_1_v5_gn_9_118960 Lactuca sativa HOM05D003347 ORTHO05D003821 6.1e-08 62.4 78 50.0
CsaV3_6G037360 Cucumis sativus L. HOM05D003347 ORTHO05D003821 8.0e-08 62.0 199 51.8
Oeu033124.1 Olea europaea HOM05D002729 ORTHO05D003163 8.0e-08 62.0 74 51.4
DCAR_031791 Daucus carota HOM05D003347 ORTHO05D003821 1.4e-07 61.2 70 70.0
ECA248G0339 Erigeron canadensis HOM05D003347 ORTHO05D003821 1.4e-07 61.2 45 68.9
Hma1.2p1_1197F.1_g266100 Hydrangea macrophylla HOM05D003347 ORTHO05D003821 1.4e-07 61.2 69 53.6
FAN28G2623 Fragaria x ananassa HOM05D003347 ORTHO05D003821 3.0e-07 60.1 141 47.5
MD15G1137800 Malus domestica HOM05D003347 ORTHO05D003821 3.0e-07 60.1 123 52.8
SGA_v2.0_scaffold189G40392 Striga asiatica HOM05D000087 ORTHO05D000793 4.0e-07 59.7 235 44.3
Oeu008894.1 Olea europaea HOM05D003347 ORTHO05D003821 5.2e-07 59.3 74 48.6
Oeu008895.1 Olea europaea HOM05D003347 ORTHO05D003821 5.2e-07 59.3 74 48.6
arahy.Tifrunner.gnm1.ann1.X7GISI Arachis hypogaea HOM05D003347 ORTHO05D003821 6.7e-07 58.9 77 51.9
Cfa005522 Carpinus fangiana HOM05D003347 ORTHO05D003821 2.0e-06 57.4 147 42.2
Dinv19368 Davidia involucrata HOM05D003347 ORTHO05D003821 2.0e-06 57.4 46 67.4
CARHR051920 Cardamine hirsuta HOM05D003347 ORTHO05D003821 2.6e-06 57.0 139 62.6
Thhalv10008376m.g Eutrema salsugineum HOM05D003347 ORTHO05D003821 5.7e-06 55.8 120 45.0
MD08G1229400 Malus domestica HOM05D003347 ORTHO05D003821 5.7e-06 55.8 72 63.9
Hund12985 Selenicereus undatus HOM05D003347 ORTHO05D003821 5.7e-06 55.8 69 47.8
SEGI_15810 Sequoiadendron giganteum HOM05D003347 ORTHO05D003821 5.7e-06 55.8 79 62.0
Ca_00076_v3 Cicer arietinum L. HOM05D005880 ORTHO05D007114 7.5e-06 55.5 45 64.4
Potri.001G306100 Populus trichocarpa HOM05D003347 ORTHO05D003821 7.5e-06 55.5 79 55.7
EL10Ac4g09689 Beta vulgaris HOM05D003347 ORTHO05D003821 9.7e-06 55.1 76 44.7
THA.LOC104819474 Tarenaya hassleriana HOM05D012923 ORTHO05D014747 9.7e-06 55.1 63 65.1


User provided reference genes

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