Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.23362 Avicennia marina HOM05D008176 ORTHO05D004477 3.6e-146 521.5 257 100.0
SGA_v2.0_scaffold108G30894 Striga asiatica HOM05D008176 ORTHO05D004477 2.1e-29 133.7 160 53.1
SalBow3G2508 Salvia bowleyana HOM05D029310 ORTHO05D004477 2.2e-26 123.6 145 54.5
SalBow3G3284 Salvia bowleyana HOM05D029310 ORTHO05D004477 2.2e-26 123.6 145 54.5
QL06p048130 Quercus lobata HOM05D008176 ORTHO05D004477 6.9e-17 92.0 141 46.1
Manes.12G129900 Manihot esculenta HOM05D008176 ORTHO05D004477 1.5e-16 90.9 157 41.4
Atru.chr3.1344 Acer truncatum HOM05D008176 ORTHO05D004477 7.7e-16 88.6 142 47.2
Nn5g30002 Nelumbo nucifera HOM05D008176 ORTHO05D004477 7.7e-16 88.6 140 43.6
Dinv13234 Davidia involucrata HOM05D008176 ORTHO05D004477 1.0e-15 88.2 144 41.0
COL.COLO4_27295 Corchorus olitorius HOM05D008176 ORTHO05D004477 3.8e-15 86.3 136 44.1
Thecc.01G095600 Theobroma cacao HOM05D008176 ORTHO05D004477 3.8e-15 86.3 140 45.7
Peaxi162Scf00237g00201 Petunia axillaris HOM05D008176 ORTHO05D004477 1.1e-14 84.7 145 42.1
Sopen11g005030 Solanum pennellii HOM05D008176 ORTHO05D004477 3.2e-14 83.2 146 43.8
Nitab4.5_0000128g0240 Nicotiana tabacum HOM05D008176 ORTHO05D004477 5.5e-14 82.4 136 39.7
CiPaw.04G103600 Carya illinoinensis HOM05D008176 ORTHO05D004477 9.4e-14 81.6 142 45.1
TAR625G0942 Trochodendron aralioides HOM05D008046 ORTHO05D004477 1.6e-13 80.9 135 44.4
Nitab4.5_0012818g0010 Nicotiana tabacum HOM05D008176 ORTHO05D004477 2.3e-12 77.0 140 38.6
Duzib187G0825 Durio zibethinus HOM05D008176 ORTHO05D004477 3.0e-12 76.6 125 44.0
Duzib264G0386 Durio zibethinus HOM05D008176 ORTHO05D004477 3.0e-12 76.6 136 41.9
Sopen05g029890 Solanum pennellii HOM05D008176 ORTHO05D004477 5.2e-12 75.9 140 40.7
PGSC0003DMG400016149 Solanum tuberosum HOM05D008176 ORTHO05D004477 5.2e-12 75.9 145 40.0
Solyc11g010250.1 Solanum lycopersicum HOM05D008176 ORTHO05D004477 6.7e-12 75.5 146 39.7
TWI53G0271 Tripterygium wilfordii HOM05D008176 ORTHO05D004477 2.0e-11 73.9 135 42.2
Sopen05g029880 Solanum pennellii HOM05D008176 ORTHO05D004477 1.1e-09 68.2 136 36.8
PGSC0003DMG400016792 Solanum tuberosum HOM05D008176 ORTHO05D004477 1.8e-09 67.4 140 35.0
Haze_24851 Corylus avellana HOM05D008176 ORTHO05D004477 2.4e-09 67.0 137 38.0
Glyma.18G015000 Glycine max HOM05D008176 ORTHO05D004477 2.4e-09 67.0 121 40.5
CiPaw.03G145800 Carya illinoinensis HOM05D008176 ORTHO05D004477 4.1e-09 66.2 144 39.6
Lj4g0008028 Lotus japonicus HOM05D008176 ORTHO05D004477 5.3e-09 65.9 137 38.0
Sc03g0000170 Simmondsia chinensis HOM05D031888 ORTHO05D004477 1.6e-08 64.3 115 40.0
Hma1.2p1_0019F.1_g013800 Hydrangea macrophylla HOM05D013332 ORTHO05D004477 2.0e-08 63.9 157 32.5
Cpa.g.sc55.74 Carica papaya HOM05D008176 ORTHO05D004477 2.6e-08 63.5 150 37.3
TWI74G1149 Tripterygium wilfordii HOM05D008176 ORTHO05D004477 2.6e-08 63.5 136 38.2
GSVIVG01009081001 Vitis vinifera HOM05D008046 ORTHO05D004477 2.6e-08 63.5 126 35.7
Potri.005G072000 Populus trichocarpa HOM05D008176 ORTHO05D004477 3.5e-08 63.2 161 37.3
Gohir.A11G204400 Gossypium hirsutum HOM05D008176 ORTHO05D004477 4.5e-08 62.8 153 36.6
Gorai.007G235100 Gossypium raimondii HOM05D008176 ORTHO05D004477 4.5e-08 62.8 153 36.6
Glyma.11G242100 Glycine max HOM05D008176 ORTHO05D004477 7.7e-08 62.0 123 39.0
Gohir.D11G218800 Gossypium hirsutum HOM05D008176 ORTHO05D004477 1.0e-07 61.6 141 36.9
Sabra07G0080300 Salix brachista HOM05D008176 ORTHO05D004477 1.3e-07 61.2 150 39.3
Hma1.2p1_1148F.1_g261600 Hydrangea macrophylla HOM05D008046 ORTHO05D004477 1.7e-07 60.8 131 34.4
Manes.13G096700 Manihot esculenta HOM05D008176 ORTHO05D004477 1.7e-07 60.8 137 36.5
Ciclev10026640m.g Citrus clementina HOM05D008176 ORTHO05D004477 2.2e-07 60.5 139 37.4
TAR381G0533 Trochodendron aralioides HOM05D008046 ORTHO05D004477 3.8e-07 59.7 147 38.1
SalBow6G0175 Salvia bowleyana HOM05D029310 ORTHO05D004477 5.0e-07 59.3 84 41.7
SalBow8G3730 Salvia bowleyana HOM05D029310 ORTHO05D004477 5.0e-07 59.3 84 41.7
Nn1g05455 Nelumbo nucifera HOM05D008046 ORTHO05D004477 1.5e-06 57.8 141 31.2
Glyma.05G175800 Glycine max HOM05D008176 ORTHO05D004477 1.9e-06 57.4 137 34.3
Glyma.08G133100 Glycine max HOM05D008176 ORTHO05D004477 1.9e-06 57.4 138 34.1
Gohir.D03G040500 Gossypium hirsutum HOM05D008176 ORTHO05D004477 1.9e-06 57.4 149 34.9
Phvul.001G253900 Phaseolus vulgaris HOM05D008176 ORTHO05D004477 3.2e-06 56.6 122 36.1
Cfa002600 Carpinus fangiana HOM05D008176 ORTHO05D004477 4.2e-06 56.2 129 34.9
Gorai.003G041400 Gossypium raimondii HOM05D008176 ORTHO05D004477 5.5e-06 55.8 142 35.9
CARHR279260 Cardamine hirsuta HOM05D010563 ORTHO05D012591 7.2e-06 55.5 147 32.7


User provided reference genes

Program Settings