Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.2332 Avicennia marina HOM05D006796 ORTHO05D008615 6.4e-137 490.7 244 100.0
MSTRG.13431 Avicennia marina HOM05D006796 ORTHO05D008615 7.6e-106 387.5 223 85.7
SalBow8G2627 Salvia bowleyana HOM05D006796 ORTHO05D008615 1.3e-100 370.2 219 83.1
Migut.L01249 Erythranthe guttata HOM05D006796 ORTHO05D008615 2.0e-98 362.8 226 81.0
Cc11_g12630 Coffea canephora HOM05D006796 ORTHO05D008615 6.2e-92 341.3 217 77.9
SGA_v2.0_scaffold63G21639 Striga asiatica HOM05D006796 ORTHO05D008615 6.9e-91 337.8 234 76.1
CSS0026382 Camellia sinensis var. sinensis HOM05D006796 ORTHO05D008615 7.1e-88 327.8 229 72.1
Nitab4.5_0000391g0260 Nicotiana tabacum HOM05D006796 ORTHO05D008615 7.1e-88 327.8 242 69.0
Phvul.002G103200 Phaseolus vulgaris HOM05D006796 ORTHO05D008615 6.0e-87 324.7 246 67.9
VMungo1215G0648 Vigna mungo HOM05D006796 ORTHO05D008615 6.0e-87 324.7 246 69.1
Glyma.01G052700 Glycine max HOM05D006796 ORTHO05D008615 7.9e-87 324.3 247 68.8
CsaV3_5G022970 Cucumis sativus L. HOM05D006796 ORTHO05D008615 1.3e-86 323.6 219 73.1
Nn4g23271 Nelumbo nucifera HOM05D006796 ORTHO05D008615 2.3e-86 322.8 208 77.4
Potri.010G164400 Populus trichocarpa HOM05D006796 ORTHO05D008615 3.9e-86 322.0 234 70.5
Lj3A1033T56 Lonicera japonica HOM05D006796 ORTHO05D008615 5.1e-86 321.6 236 69.1
Manes.05G105900 Manihot esculenta HOM05D006796 ORTHO05D008615 1.5e-85 320.1 225 72.0
CAN.G964.30 Capsicum annuum HOM05D006796 ORTHO05D008615 2.5e-85 319.3 220 71.8
Glyma.02G111300 Glycine max HOM05D006796 ORTHO05D008615 3.3e-85 318.9 246 67.9
Sopen05g007830 Solanum pennellii HOM05D006796 ORTHO05D008615 3.3e-85 318.9 223 71.7
TWI31G0717 Tripterygium wilfordii HOM05D006796 ORTHO05D008615 3.3e-85 318.9 220 73.6
Actinidia19934 Actinidia chinensis HOM05D006796 ORTHO05D008615 5.7e-85 318.2 226 71.2
Oeu055099.3 Olea europaea HOM05D006796 ORTHO05D008615 9.7e-85 317.4 303 57.4
TAR629G0550 Trochodendron aralioides HOM05D006796 ORTHO05D008615 2.8e-84 315.8 222 72.5
PGSC0003DMG400028345 Solanum tuberosum HOM05D006796 ORTHO05D008615 3.7e-84 315.5 225 70.7
arahy.Tifrunner.gnm1.ann1.NP20FV Arachis hypogaea HOM05D006796 ORTHO05D008615 6.3e-84 314.7 225 72.9
arahy.Tifrunner.gnm1.ann1.R8NX8D Arachis hypogaea HOM05D006796 ORTHO05D008615 6.3e-84 314.7 225 72.9
ClCG09G022060 Citrullus lanatus HOM05D006796 ORTHO05D008615 1.1e-83 313.9 214 72.4
Thecc.02G339900 Theobroma cacao HOM05D006796 ORTHO05D008615 3.1e-83 312.4 243 67.9
Peaxi162Scf00222g00236 Petunia axillaris HOM05D006796 ORTHO05D008615 5.3e-83 311.6 228 69.7
CiPaw.07G071700 Carya illinoinensis HOM05D006796 ORTHO05D008615 6.9e-83 311.2 215 73.5
Sabra10G0124800 Salix brachista HOM05D006796 ORTHO05D008615 9.0e-83 310.8 207 75.4
Atru.chr11.1722 Acer truncatum HOM05D006796 ORTHO05D008615 1.2e-82 310.5 228 71.5
TAR371G0712 Trochodendron aralioides HOM05D006796 ORTHO05D008615 2.6e-82 309.3 202 76.7
Psat2g126440 Pisum sativum HOM05D006796 ORTHO05D008615 3.4e-82 308.9 226 71.2
Dinv34092 Davidia involucrata HOM05D006796 ORTHO05D008615 4.5e-82 308.5 228 70.6
Lj2g0006920 Lotus japonicus HOM05D006796 ORTHO05D008615 4.5e-82 308.5 226 70.4
FAN07G2185 Fragaria x ananassa HOM05D006796 ORTHO05D008615 7.6e-82 307.8 226 70.8
GSVIVG01012496001 Vitis vinifera HOM05D006796 ORTHO05D008615 7.6e-82 307.8 215 74.0
Ca_04876_v3 Cicer arietinum L. HOM05D006796 ORTHO05D008615 1.0e-81 307.4 235 68.1
Cpa.g.sc1.63 Carica papaya HOM05D006796 ORTHO05D008615 1.3e-81 307.0 218 72.5
Ciclev10032381m.g Citrus clementina HOM05D006796 ORTHO05D008615 1.3e-81 307.0 224 71.4
Duzib268G1785 Durio zibethinus HOM05D006796 ORTHO05D008615 1.7e-81 306.6 226 70.4
Gorai.012G186400 Gossypium raimondii HOM05D006796 ORTHO05D008615 1.7e-81 306.6 251 64.5
ECA234G4054 Erigeron canadensis HOM05D006796 ORTHO05D008615 2.2e-81 306.2 205 74.6
TPR.G19931 Trifolium pratense HOM05D006796 ORTHO05D008615 2.2e-81 306.2 245 66.9
FvH4_4g30770 Fragaria vesca HOM05D006796 ORTHO05D008615 2.9e-81 305.8 195 78.5
FAN12G1163 Fragaria x ananassa HOM05D006796 ORTHO05D008615 2.9e-81 305.8 195 78.5
FAN22G2031 Fragaria x ananassa HOM05D006796 ORTHO05D008615 2.9e-81 305.8 195 78.5
Hma1.2p1_0354F.1_g133830 Hydrangea macrophylla HOM05D006796 ORTHO05D008615 6.5e-81 304.7 205 75.1
Gohir.D04G191000 Gossypium hirsutum HOM05D006796 ORTHO05D008615 3.2e-80 302.4 251 64.1
MELO3C002984.2 Cucumis melo HOM05D006796 ORTHO05D008615 4.2e-80 302.0 257 61.9
Prupe.1G279300 Prunus persica HOM05D006796 ORTHO05D008615 4.2e-80 302.0 200 75.5
Lalb_Chr10g0098461 Lupinus albus HOM05D006796 ORTHO05D008615 5.5e-80 301.6 200 76.0
PGR102G1583 Punica granatum HOM05D006796 ORTHO05D008615 5.5e-80 301.6 195 76.4
Sc11g0002140 Simmondsia chinensis HOM05D006796 ORTHO05D008615 5.5e-80 301.6 239 66.1
Eucgr.B03198 Eucalyptus grandis HOM05D006796 ORTHO05D008615 9.4e-80 300.8 207 73.4
Lsat_1_v5_gn_4_10660 Lactuca sativa HOM05D006796 ORTHO05D008615 9.4e-80 300.8 253 64.8
Haze_11961 Corylus avellana HOM05D006796 ORTHO05D008615 1.2e-79 300.4 240 66.2
RcHm_v2.0_Chr4g0439161 Rosa chinensis HOM05D006796 ORTHO05D008615 1.2e-79 300.4 195 77.4
Hund25209 Selenicereus undatus HOM05D006796 ORTHO05D008615 2.1e-79 299.7 207 74.4
CANSAT64G1871 Cannabis sativa HOM05D006796 ORTHO05D008615 2.3e-78 296.2 202 73.8
EL10Ac6g13260 Beta vulgaris HOM05D006796 ORTHO05D008615 6.7e-78 294.7 209 71.8
MD16G1067400 Malus domestica HOM05D006796 ORTHO05D008615 8.8e-78 294.3 195 75.4
unitig_8.g3954 Utricularia gibba HOM05D006796 ORTHO05D008615 1.9e-77 293.1 219 68.0
CARHR014360 Cardamine hirsuta HOM05D006796 ORTHO05D008615 3.3e-77 292.4 238 64.3
PSO017G7370 Papaver somniferum HOM05D006796 ORTHO05D008615 5.7e-77 291.6 199 73.9
Thhalv10008453m.g Eutrema salsugineum HOM05D006796 ORTHO05D008615 1.3e-76 290.4 205 71.2
Aqoxy3G00482 Aquilegia oxysepala HOM05D006796 ORTHO05D008615 2.2e-76 289.7 202 71.3
THA.LOC104805179 Tarenaya hassleriana HOM05D006796 ORTHO05D008615 2.2e-76 289.7 214 67.3
PSO478G1165 Papaver somniferum HOM05D006796 ORTHO05D008615 3.7e-76 288.9 199 73.4
Gohir.D04G190901 Gossypium hirsutum HOM05D006796 ORTHO05D008615 4.8e-76 288.5 244 62.3
CiPaw.05G129900 Carya illinoinensis HOM05D006796 ORTHO05D008615 1.4e-75 287.0 202 73.8
MD13G1068600 Malus domestica HOM05D006796 ORTHO05D008615 1.4e-75 287.0 195 72.3
CDE02G1750 Ceratophyllum demersum HOM05D006796 ORTHO05D008615 1.8e-75 286.6 218 68.3
AL1G25830 Arabidopsis lyrata HOM05D006796 ORTHO05D008615 6.9e-75 284.6 195 72.3
AT1G13990 Arabidopsis thaliana HOM05D006796 ORTHO05D008615 9.1e-75 284.3 195 71.8
C05p11750 Brassica napus HOM05D006796 ORTHO05D008615 1.5e-74 283.5 195 72.3
Carub.0001s1368 Capsella rubella HOM05D006796 ORTHO05D008615 1.3e-73 280.4 195 70.8
QL03p069702 Quercus lobata HOM05D006796 ORTHO05D008615 1.7e-73 280.0 277 56.0
BcaC05g25295 Brassica carinata HOM05D006796 ORTHO05D008615 5.0e-73 278.5 191 72.3
BolC5t29921H Brassica oleracea HOM05D006796 ORTHO05D008615 5.5e-72 275.0 211 66.8
ATR0564G337 Amborella trichopoda HOM05D006796 ORTHO05D008615 4.7e-71 271.9 197 70.6
AUR62032832 Chenopodium quinoa HOM05D006796 ORTHO05D008615 4.7e-71 271.9 210 67.6
Aa31LG1G1040 Aethionema arabicum HOM05D006796 ORTHO05D008615 1.0e-70 270.8 279 54.1
vmacro01347 Vaccinium macrocarpon HOM05D006796 ORTHO05D008615 3.0e-70 269.2 270 56.7
BraA06t24185Z Brassica rapa HOM05D006796 ORTHO05D008615 8.8e-70 267.7 224 63.4
HPP92_016903 Vanilla planifolia HOM05D006796 ORTHO05D008615 4.1e-67 258.8 211 61.6
Cfa008932 Carpinus fangiana HOM05D006796 ORTHO05D008615 2.6e-66 256.1 343 46.1
AUR62005838 Chenopodium quinoa HOM05D006796 ORTHO05D008615 7.7e-66 254.6 182 72.5
Zm00001eb402440 Zea mays HOM05D006796 ORTHO05D008615 7.7e-66 254.6 198 64.6
Os03g0168200 Oryza sativa ssp. japonica HOM05D006796 ORTHO05D008615 2.9e-65 252.7 192 67.2
COL.COLO4_27978 Corchorus olitorius HOM05D006796 ORTHO05D008615 9.4e-64 247.7 224 59.8
Mapoly0042s0065 Marchantia polymorpha HOM05D006796 ORTHO05D008615 2.1e-63 246.5 220 59.5
Nitab4.5_0004906g0020 Nicotiana tabacum HOM05D006796 ORTHO05D008615 4.7e-63 245.4 150 78.0
Sed0012383 Sechium edule HOM05D006796 ORTHO05D008615 1.1e-61 240.7 189 63.5
HanXRQChr12g0379181 Helianthus annuus HOM05D006796 ORTHO05D008615 3.7e-60 235.7 176 68.2
A06p09990 Brassica napus HOM05D006796 ORTHO05D008615 1.8e-59 233.4 230 56.5
arahy.Tifrunner.gnm1.ann1.T4YGUP Arachis hypogaea HOM05D006796 ORTHO05D008615 2.4e-51 206.5 161 69.6
Potri.008G090900 Populus trichocarpa HOM05D006796 ORTHO05D008615 5.5e-48 195.3 184 59.8
CBR_g41640 Chara braunii HOM05D006796 ORTHO05D008615 2.7e-47 193.0 234 49.1
SMO271G0176 Selaginella moellendorffii HOM05D006796 ORTHO05D008615 1.8e-46 190.3 207 52.2
Actinidia31964 Actinidia chinensis HOM05D006796 ORTHO05D008615 4.0e-46 189.1 133 75.2
Gohir.1Z049816 Gossypium hirsutum HOM05D006796 ORTHO05D008615 6.8e-46 188.3 131 73.3
Medtr5g042520 Medicago truncatula HOM05D006796 ORTHO05D008615 3.3e-40 169.5 124 71.0
Hma1.2p1_0354F.1_g133820 Hydrangea macrophylla HOM05D006796 ORTHO05D008615 2.1e-39 166.8 108 76.9
Solyc05g013060.4 Solanum lycopersicum HOM05D006796 ORTHO05D008615 1.1e-35 154.5 116 69.8
Rhsim12G0078900 Rhododendron simsii HOM05D006796 ORTHO05D008615 1.6e-31 140.6 342 33.6
AagrBONN_evm.TU.Sc2ySwM_344.1473 Anthoceros agrestis HOM05D006796 ORTHO05D008615 8.9e-30 134.8 148 52.7
Oeu021077.1 Olea europaea HOM05D006796 ORTHO05D008615 1.5e-24 117.5 234 35.5
CDE09G0941 Ceratophyllum demersum HOM05D006796 ORTHO05D008615 3.3e-24 116.3 80 68.8
Nn2g13928 Nelumbo nucifera HOM05D006796 ORTHO05D008615 3.4e-21 106.3 88 63.6
vmacro01341 Vaccinium macrocarpon HOM05D006796 ORTHO05D008615 4.4e-21 105.9 189 39.7
SEGI_14917 Sequoiadendron giganteum HOM05D006796 ORTHO05D008615 1.7e-20 104.0 75 68.0
SalBow1G4829 Salvia bowleyana HOM05D006796 ORTHO05D000018 3.5e-18 96.3 68 69.1
PRCOL_00001264 Prasinoderma coloniale HOM05D006796 ORTHO05D008615 6.6e-09 65.5 231 26.8
Gohir.A12G247950 Gossypium hirsutum HOM05D006796 ORTHO05D008615 1.6e-07 60.8 57 54.4
Ca_27564_v3 Cicer arietinum L. HOM05D003588 ORTHO05D004252 2.4e-06 57.0 38 71.1
Nn2g11199 Nelumbo nucifera HOM05D006796 ORTHO05D008615 3.1e-06 56.6 61 49.2
Ca_04476_v3 Cicer arietinum L. HOM05D003588 ORTHO05D004252 6.8e-06 55.5 85 40.0
Ca_28040_v3 Cicer arietinum L. HOM05D006796 ORTHO05D008615 8.9e-06 55.1 37 67.6


User provided reference genes

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