Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.23314 Avicennia marina HOM05D007384 ORTHO05D008511 3.5e-74 281.6 146 100.0
MSTRG.2538 Avicennia marina HOM05D007384 ORTHO05D008511 1.9e-32 142.9 150 57.3
SalBow5G4202 Salvia bowleyana HOM05D007384 ORTHO05D008511 3.7e-31 138.7 150 57.3
SalBow5G0260 Salvia bowleyana HOM05D007384 ORTHO05D008511 4.8e-31 138.3 149 57.0
Oeu056489.1 Olea europaea HOM05D007384 ORTHO05D008511 4.5e-29 131.7 156 48.1
Oeu056487.1 Olea europaea HOM05D007384 ORTHO05D008511 1.4e-27 126.7 154 46.8
Oeu028527.1 Olea europaea HOM05D007384 ORTHO05D008511 2.5e-27 125.9 149 49.7
Oeu028378.1 Olea europaea HOM05D007384 ORTHO05D008511 1.2e-26 123.6 159 47.8
Oeu028376.1 Olea europaea HOM05D007384 ORTHO05D008511 3.6e-26 122.1 159 47.2
SGA_v2.0_scaffold47G17711 Striga asiatica HOM05D007384 ORTHO05D008511 7.9e-26 120.9 152 51.3
SalBow6G3892 Salvia bowleyana HOM05D007384 ORTHO05D008511 6.3e-23 111.3 146 43.2
SGA_v2.0_scaffold2G01297 Striga asiatica HOM05D007384 ORTHO05D008511 6.5e-20 101.3 149 44.3
Cc07_g16090 Coffea canephora HOM05D007384 ORTHO05D008511 8.5e-20 100.9 157 40.8
Peaxi162Scf00323g00037 Petunia axillaris HOM05D007384 ORTHO05D008511 8.5e-20 100.9 157 38.2
PGSC0003DMG400012958 Solanum tuberosum HOM05D007384 ORTHO05D008511 1.1e-19 100.5 156 40.4
Dinv42700 Davidia involucrata HOM05D007384 ORTHO05D008511 1.5e-16 90.1 170 40.6
Dinv19495 Davidia involucrata HOM05D007384 ORTHO05D008511 7.4e-16 87.8 171 38.6
unitig_736.g22624 Utricularia gibba HOM05D007384 ORTHO05D008511 7.4e-16 87.8 153 37.9
VMungo0251G1085 Vigna mungo HOM05D007384 ORTHO05D008511 8.2e-15 84.3 147 40.1
Solyc04g053145.1 Solanum lycopersicum HOM05D007384 ORTHO05D008511 3.1e-14 82.4 150 33.3
Glyma.05G183400 Glycine max HOM05D007384 ORTHO05D008511 1.6e-13 80.1 153 37.9
Sabra05G0069000 Salix brachista HOM05D007384 ORTHO05D008511 2.0e-13 79.7 160 34.4
Sopen04g023570 Solanum pennellii HOM05D007384 ORTHO05D008511 2.0e-13 79.7 150 32.7
Glyma.08G141200 Glycine max HOM05D007384 ORTHO05D008511 2.6e-13 79.3 160 36.2
Lsat_1_v5_gn_2_65360 Lactuca sativa HOM05D007384 ORTHO05D008511 7.7e-13 77.8 160 33.8
HanXRQChr10g0295241 Helianthus annuus HOM05D007384 ORTHO05D008511 1.0e-12 77.4 148 37.2
Migut.L00076 Erythranthe guttata HOM05D007384 ORTHO05D008511 2.9e-12 75.9 154 36.4
TWI77G0698 Tripterygium wilfordii HOM05D007384 ORTHO05D008511 5.0e-12 75.1 170 34.1
Thecc.01G112100 Theobroma cacao HOM05D007384 ORTHO05D008511 1.1e-11 73.9 158 34.8
Rhsim10G0013800 Rhododendron simsii HOM05D007384 ORTHO05D008511 4.2e-11 72.0 152 37.5
Duzib187G0804 Durio zibethinus HOM05D007384 ORTHO05D008511 5.5e-11 71.6 147 38.1
DCAR_001367 Daucus carota HOM05D007384 ORTHO05D008511 2.1e-10 69.7 143 32.9
Hund03542 Selenicereus undatus HOM05D007384 ORTHO05D008511 2.7e-10 69.3 162 35.2
Lj1g0001463 Lotus japonicus HOM05D007384 ORTHO05D008511 3.6e-10 68.9 155 33.5
Nitab4.5_0000471g0140 Nicotiana tabacum HOM05D007384 ORTHO05D008511 4.7e-10 68.6 159 30.8
Medtr3g094800 Medicago truncatula HOM05D007384 ORTHO05D008511 8.0e-10 67.8 159 32.1
Potri.005G083900 Populus trichocarpa HOM05D007384 ORTHO05D008511 1.0e-09 67.4 161 32.3
Duzib187G1860 Durio zibethinus HOM05D007384 ORTHO05D008511 1.4e-09 67.0 156 34.6
Lj4g0022190 Lotus japonicus HOM05D007384 ORTHO05D008511 1.8e-09 66.6 153 34.6
Lj4g0025402 Lotus japonicus HOM05D007384 ORTHO05D008511 1.8e-09 66.6 153 34.6
Sc07g0001520 Simmondsia chinensis HOM05D007384 ORTHO05D008511 1.8e-09 66.6 143 33.6
unitig_899.g14602 Utricularia gibba HOM05D007384 ORTHO05D008511 3.0e-09 65.9 150 35.3
FAN19G0612 Fragaria x ananassa HOM05D007384 ORTHO05D008511 4.0e-09 65.5 156 34.6
TPR.G40723 Trifolium pratense HOM05D007384 ORTHO05D008511 4.0e-09 65.5 138 39.1
EL10Ac6g14748 Beta vulgaris HOM05D007384 ORTHO05D008511 5.2e-09 65.1 164 29.9
FvH4_1g22200 Fragaria vesca HOM05D007384 ORTHO05D008511 5.2e-09 65.1 156 34.6
Hund19659 Selenicereus undatus HOM05D007384 ORTHO05D008511 1.2e-08 63.9 158 31.6
CsaV3_2G017570 Cucumis sativus L. HOM05D007384 ORTHO05D008511 1.5e-08 63.5 169 34.9
RcHm_v2.0_Chr2g0116341 Rosa chinensis HOM05D007384 ORTHO05D008511 2.0e-08 63.2 153 35.3
TAR520G0001 Trochodendron aralioides HOM05D007384 ORTHO05D008511 2.0e-08 63.2 170 28.8
FAN23G2853 Fragaria x ananassa HOM05D007384 ORTHO05D008511 2.6e-08 62.8 156 34.0
Potri.007G081700 Populus trichocarpa HOM05D007384 ORTHO05D008511 4.4e-08 62.0 153 35.3
Manes.13G077680 Manihot esculenta HOM05D007384 ORTHO05D008511 5.7e-08 61.6 162 32.7
TAR628G0188 Trochodendron aralioides HOM05D007384 ORTHO05D008511 5.7e-08 61.6 170 28.2
Gohir.A10G086700 Gossypium hirsutum HOM05D007384 ORTHO05D008511 1.3e-07 60.5 155 31.0
CANSAT01G1949 Cannabis sativa HOM05D007384 ORTHO05D008511 2.2e-07 59.7 165 29.7
Gorai.003G046900 Gossypium raimondii HOM05D007384 ORTHO05D008511 2.2e-07 59.7 163 30.7
Gorai.011G111700 Gossypium raimondii HOM05D007384 ORTHO05D008511 2.8e-07 59.3 155 30.3
CiPaw.03G134700 Carya illinoinensis HOM05D007384 ORTHO05D008511 3.7e-07 58.9 168 31.5
FAN26G2489 Fragaria x ananassa HOM05D007384 ORTHO05D008511 6.3e-07 58.2 156 33.3
Nn5g28918 Nelumbo nucifera HOM05D007384 ORTHO05D008511 8.2e-07 57.8 168 31.0
QL06p032302 Quercus lobata HOM05D007384 ORTHO05D008511 8.2e-07 57.8 66 51.5
Rhsim08G0006700 Rhododendron simsii HOM05D007384 ORTHO05D008511 8.2e-07 57.8 169 32.0
Lalb_Chr11g0068051 Lupinus albus HOM05D007384 ORTHO05D008511 1.1e-06 57.4 157 28.0
arahy.Tifrunner.gnm1.ann1.P053PK Arachis hypogaea HOM05D007384 ORTHO05D008511 1.8e-06 56.6 164 32.3
MD01G1019000 Malus domestica HOM05D007384 ORTHO05D008511 2.4e-06 56.2 152 30.3
Sed0027168 Sechium edule HOM05D007384 ORTHO05D008511 2.4e-06 56.2 170 34.7
Cfa002748 Carpinus fangiana HOM05D007384 ORTHO05D008511 3.1e-06 55.8 70 45.7
Phvul.002G264500 Phaseolus vulgaris HOM05D007384 ORTHO05D008511 3.1e-06 55.8 150 30.7
THA.LOC104799256 Tarenaya hassleriana HOM05D012887 ORTHO05D008511 5.3e-06 55.1 165 31.5
arahy.Tifrunner.gnm1.ann1.66AXK3 Arachis hypogaea HOM05D007384 ORTHO05D008511 7.0e-06 54.7 166 31.3
arahy.Tifrunner.gnm1.ann1.3HN607 Arachis hypogaea HOM05D007384 ORTHO05D008511 9.1e-06 54.3 166 31.3
CARHR278890 Cardamine hirsuta HOM05D012887 ORTHO05D008511 9.1e-06 54.3 167 32.9


User provided reference genes

Program Settings