Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.23109 Avicennia marina HOM05D007441 ORTHO05D009501 6.4e-100 367.5 193 100.0
SGA_v2.0_scaffold90G27976 Striga asiatica HOM05D007441 ORTHO05D009501 9.4e-59 230.7 181 66.9
SalBow5G3166 Salvia bowleyana HOM05D007441 ORTHO05D009501 2.2e-52 209.5 176 63.6
Oeu016356.1 Olea europaea HOM05D007441 ORTHO05D009501 1.6e-45 186.8 182 55.5
Thecc.03G008500 Theobroma cacao HOM05D007441 ORTHO05D009501 3.8e-44 182.2 169 55.0
Duzib084G0400 Durio zibethinus HOM05D007441 ORTHO05D009501 3.2e-43 179.1 173 53.8
CSS0037538 Camellia sinensis var. sinensis HOM05D007441 ORTHO05D009501 1.6e-42 176.8 188 52.1
Hma1.2p1_0176F.1_g077710 Hydrangea macrophylla HOM05D007441 ORTHO05D009501 4.7e-42 175.3 184 57.1
Duzib205G0170 Durio zibethinus HOM05D007441 ORTHO05D009501 1.4e-41 173.7 171 53.2
Sc04g0001930 Simmondsia chinensis HOM05D007441 ORTHO05D009501 1.4e-41 173.7 177 50.3
CiPaw.11G029400 Carya illinoinensis HOM05D007441 ORTHO05D009501 2.3e-41 172.9 182 54.4
Lj9A451T94 Lonicera japonica HOM05D007441 ORTHO05D009501 4.0e-41 172.2 170 54.1
Dinv20676 Davidia involucrata HOM05D007441 ORTHO05D009501 6.8e-41 171.4 181 53.0
arahy.Tifrunner.gnm1.ann1.DR4P4T Arachis hypogaea HOM05D007441 ORTHO05D009501 1.5e-40 170.2 177 53.7
arahy.Tifrunner.gnm1.ann1.01HJP6 Arachis hypogaea HOM05D007441 ORTHO05D009501 2.0e-40 169.9 177 53.7
FvH4_5g05090 Fragaria vesca HOM05D007441 ORTHO05D009501 2.6e-40 169.5 189 50.8
Glyma.17G091300 Glycine max HOM05D007441 ORTHO05D009501 3.4e-40 169.1 188 48.9
Ciclev10022460m.g Citrus clementina HOM05D007441 ORTHO05D009501 9.8e-40 167.5 174 52.3
GSVIVG01007790001 Vitis vinifera HOM05D007441 ORTHO05D009501 9.8e-40 167.5 178 50.0
AUR62008240 Chenopodium quinoa HOM05D007441 ORTHO05D009501 1.3e-39 167.2 186 48.9
FAN18G4363 Fragaria x ananassa HOM05D007441 ORTHO05D009501 1.3e-39 167.2 189 50.3
CANSAT80G2614 Cannabis sativa HOM05D007441 ORTHO05D009501 1.7e-39 166.8 147 59.2
TAR622G1175 Trochodendron aralioides HOM05D007441 ORTHO05D009501 1.7e-39 166.8 173 54.3
QL10p013655 Quercus lobata HOM05D007441 ORTHO05D009501 2.2e-39 166.4 150 58.7
Actinidia19093 Actinidia chinensis HOM05D007441 ORTHO05D009501 3.7e-39 165.6 173 53.2
FAN13G3077 Fragaria x ananassa HOM05D007441 ORTHO05D009501 3.7e-39 165.6 189 49.2
THA.LOC104809273 Tarenaya hassleriana HOM05D007441 ORTHO05D009501 4.9e-39 165.2 184 48.9
VMungo1215G1307 Vigna mungo HOM05D007441 ORTHO05D009501 4.9e-39 165.2 178 52.2
Atru.chr9.2436 Acer truncatum HOM05D007441 ORTHO05D009501 6.3e-39 164.9 180 52.8
FAN04G2715 Fragaria x ananassa HOM05D007441 ORTHO05D009501 6.3e-39 164.9 190 48.9
TWI15G0162 Tripterygium wilfordii HOM05D007441 ORTHO05D009501 6.3e-39 164.9 195 50.8
Solyc03g114120.3 Solanum lycopersicum HOM05D007441 ORTHO05D009501 8.3e-39 164.5 182 53.3
Sopen03g033180 Solanum pennellii HOM05D007441 ORTHO05D009501 8.3e-39 164.5 182 53.3
Lsat_1_v5_gn_1_26521 Lactuca sativa HOM05D007441 ORTHO05D009501 1.1e-38 164.1 146 56.2
ECA247G2439 Erigeron canadensis HOM05D007441 ORTHO05D009501 1.8e-38 163.3 141 58.9
PGSC0003DMG400024487 Solanum tuberosum HOM05D007441 ORTHO05D009501 1.8e-38 163.3 182 52.7
Lalb_Chr07g0182651 Lupinus albus HOM05D007441 ORTHO05D009501 5.4e-38 161.8 145 57.2
MD14G1183800 Malus domestica HOM05D007441 ORTHO05D009501 5.4e-38 161.8 149 57.7
Manes.06G102900 Manihot esculenta HOM05D007441 ORTHO05D009501 5.4e-38 161.8 181 51.4
Lj4g0018861 Lotus japonicus HOM05D007441 ORTHO05D009501 7.0e-38 161.4 184 50.5
AUR62030992 Chenopodium quinoa HOM05D007441 ORTHO05D009501 1.6e-37 160.2 186 47.8
PGR044G0794 Punica granatum HOM05D007441 ORTHO05D009501 1.6e-37 160.2 152 54.6
RcHm_v2.0_Chr7g0193911 Rosa chinensis HOM05D007441 ORTHO05D009501 2.0e-37 159.8 180 48.9
Phvul.003G198700 Phaseolus vulgaris HOM05D007441 ORTHO05D009501 3.5e-37 159.1 178 51.7
Prupe.5G176500 Prunus persica HOM05D007441 ORTHO05D009501 1.0e-36 157.5 149 58.4
Cpa.g.sc124.33 Carica papaya HOM05D007441 ORTHO05D009501 5.0e-36 155.2 190 48.4
HanXRQChr02g0037211 Helianthus annuus HOM05D007441 ORTHO05D009501 5.0e-36 155.2 174 46.6
Sp1g23350 Schrenkiella parvula HOM05D007441 ORTHO05D009501 6.6e-36 154.8 141 54.6
Ca_21905_v3 Cicer arietinum L. HOM05D007441 ORTHO05D009501 8.6e-36 154.5 181 49.7
Nitab4.5_0006831g0010 Nicotiana tabacum HOM05D007441 ORTHO05D009501 8.6e-36 154.5 185 50.8
AT1G24450 Arabidopsis thaliana HOM05D007441 ORTHO05D009501 1.1e-35 154.1 170 49.4
Medtr4g106640 Medicago truncatula HOM05D007441 ORTHO05D009501 1.9e-35 153.3 178 50.0
Hund02733 Selenicereus undatus HOM05D007441 ORTHO05D009501 1.9e-35 153.3 177 47.5
Rhsim12G0163200 Rhododendron simsii HOM05D007441 ORTHO05D009501 2.5e-35 152.9 151 53.0
Ca_21923_v3 Cicer arietinum L. HOM05D007441 ORTHO05D009501 3.3e-35 152.5 149 54.4
CARHR026680 Cardamine hirsuta HOM05D007441 ORTHO05D009501 4.2e-35 152.1 185 48.1
Psat4g057000 Pisum sativum HOM05D007441 ORTHO05D009501 4.2e-35 152.1 176 46.0
Potri.012G078400 Populus trichocarpa HOM05D007441 ORTHO05D009501 4.2e-35 152.1 169 50.3
BcaC05g26717 Brassica carinata HOM05D007441 ORTHO05D009501 5.5e-35 151.8 171 48.5
AL1G40490 Arabidopsis lyrata HOM05D007441 ORTHO05D009501 1.2e-34 150.6 160 50.6
A09p38770 Brassica napus HOM05D007441 ORTHO05D009501 1.2e-34 150.6 151 52.3
BraA09t39385Z Brassica rapa HOM05D007441 ORTHO05D009501 1.2e-34 150.6 151 52.3
Nn4g22840 Nelumbo nucifera HOM05D007441 ORTHO05D009501 1.6e-34 150.2 178 47.8
C05p25830 Brassica napus HOM05D007441 ORTHO05D009501 2.8e-34 149.4 143 52.4
Carub.0001s2566 Capsella rubella HOM05D007441 ORTHO05D009501 2.8e-34 149.4 137 55.5
CAN.G4872.1 Capsicum annuum HOM05D007441 ORTHO05D009501 4.7e-34 148.7 158 55.7
Aa31LG7G9580 Aethionema arabicum HOM05D007441 ORTHO05D009501 8.0e-34 147.9 177 48.6
Thhalv10008862m.g Eutrema salsugineum HOM05D007441 ORTHO05D009501 1.0e-33 147.5 173 48.0
Sabra12G0056200 Salix brachista HOM05D007441 ORTHO05D009501 1.4e-33 147.1 173 48.6
TPR.G37479 Trifolium pratense HOM05D007441 ORTHO05D009501 1.8e-33 146.7 182 44.0
Nitab4.5_0010542g0040 Nicotiana tabacum HOM05D007441 ORTHO05D001268 2.3e-33 146.4 140 57.1
BolC5t31303H Brassica oleracea HOM05D007441 ORTHO05D009501 5.2e-33 145.2 141 51.8
EL10Ac5g10787 Beta vulgaris HOM05D007441 ORTHO05D009501 6.8e-33 144.8 135 53.3
Aqoxy3G03040 Aquilegia oxysepala HOM05D007441 ORTHO05D009501 2.6e-32 142.9 152 53.3
Potri.015G073900 Populus trichocarpa HOM05D007441 ORTHO05D009501 2.6e-32 142.9 178 48.3
PSO832G4588 Papaver somniferum HOM05D007441 ORTHO05D009501 3.4e-32 142.5 145 53.1
CAN.G781.35 Capsicum annuum HOM05D007441 ORTHO05D009501 2.4e-30 136.3 138 55.1
Haze_07488 Corylus avellana HOM05D007441 ORTHO05D009501 2.4e-30 136.3 183 45.4
AUR62029952 Chenopodium quinoa HOM05D007441 ORTHO05D009501 3.5e-29 132.5 135 51.1
DCAR_031307 Daucus carota HOM05D007441 ORTHO05D009501 4.6e-29 132.1 122 56.6
BcaC05g26720 Brassica carinata HOM05D007441 ORTHO05D009501 5.0e-28 128.6 141 48.2
Dinv09163 Davidia involucrata HOM05D007441 ORTHO05D009501 7.3e-27 124.8 127 55.1
ATR1149G031 Amborella trichopoda HOM05D007441 ORTHO05D009501 2.8e-26 122.9 137 48.2
Peaxi162Scf00017g00269 Petunia axillaris HOM05D007441 ORTHO05D009501 4.7e-26 122.1 123 55.3
MBI15_g31106_MAGBIO Magnolia biondii HOM05D007441 ORTHO05D009501 2.3e-25 119.8 121 50.4
BcaC05g26525 Brassica carinata HOM05D007441 ORTHO05D009501 4.0e-25 119.0 116 50.9
BcaC06g35265 Brassica carinata HOM05D007441 ORTHO05D009501 6.8e-25 118.2 110 53.6
C07p18070 Brassica napus HOM05D007441 ORTHO05D009501 3.4e-24 115.9 110 52.7
Migut.I00040 Erythranthe guttata HOM05D007441 ORTHO05D009501 3.5e-21 105.9 174 40.8
AUR62039786 Chenopodium quinoa HOM05D007441 ORTHO05D009501 1.3e-20 104.0 122 50.8
Zm00001eb210540 Zea mays HOM05D007441 ORTHO05D009501 8.6e-20 101.3 140 40.0
BolC7t42316H Brassica oleracea HOM05D007441 ORTHO05D009501 8.1e-18 94.7 105 45.7
Medtr4g079220 Medicago truncatula HOM05D007441 ORTHO05D009501 1.8e-17 93.6 108 50.0
AUR62040474 Chenopodium quinoa HOM05D007441 ORTHO05D009501 1.2e-16 90.9 134 40.3
Actinidia34944 Actinidia chinensis HOM05D007441 ORTHO05D009501 7.5e-16 88.2 81 56.8
CAN.G781.34 Capsicum annuum HOM05D007441 ORTHO05D009501 4.6e-13 79.0 84 53.6
COL.COLO4_16923 Corchorus olitorius HOM05D007441 ORTHO05D009501 7.8e-13 78.2 91 45.1
Os03g0854400 Oryza sativa ssp. japonica HOM05D007441 ORTHO05D009501 3.0e-12 76.3 138 35.5
SMO118G0028 Selaginella moellendorffii HOM05D007441 ORTHO05D009501 1.5e-11 73.9 124 36.3
HPP92_004711 Vanilla planifolia HOM05D007441 ORTHO05D009501 2.3e-09 66.6 98 40.8
SEGI_24388 Sequoiadendron giganteum HOM05D007441 ORTHO05D009501 1.2e-08 64.3 109 38.5


User provided reference genes

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