Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.22940 Avicennia marina HOM05D005975 ORTHO05D007373 0.0e+00 1253.0 621 100.0
Migut.I00389 Erythranthe guttata HOM05D005975 ORTHO05D007373 2.6e-288 995.0 608 81.9
SGA_v2.0_scaffold25G10981 Striga asiatica HOM05D005975 ORTHO05D007373 3.6e-285 984.6 602 80.4
Dinv38586 Davidia involucrata HOM05D005975 ORTHO05D007373 2.8e-274 948.3 603 77.1
Oeu024324.1 Olea europaea HOM05D005975 ORTHO05D007373 7.0e-273 943.7 605 77.7
Peaxi162Scf00015g00726 Petunia axillaris HOM05D005975 ORTHO05D007373 1.0e-271 939.9 609 75.9
Solyc03g119750.4 Solanum lycopersicum HOM05D005975 ORTHO05D007373 2.5e-270 935.3 607 75.1
PGSC0003DMG400005625 Solanum tuberosum HOM05D005975 ORTHO05D007373 7.2e-270 933.7 607 74.8
Sopen03g038600 Solanum pennellii HOM05D005975 ORTHO05D007373 2.1e-269 932.2 606 74.8
Hma1.2p1_0592F.1_g185285 Hydrangea macrophylla HOM05D005975 ORTHO05D007373 1.8e-268 929.1 606 75.6
RcHm_v2.0_Chr7g0184651 Rosa chinensis HOM05D005975 ORTHO05D007373 4.0e-268 927.9 609 74.7
CAN.G438.116 Capsicum annuum HOM05D005975 ORTHO05D007373 6.8e-268 927.2 618 73.8
QL10p022556 Quercus lobata HOM05D005975 ORTHO05D007373 1.5e-267 926.0 622 73.2
Thecc.03G028700 Theobroma cacao HOM05D005975 ORTHO05D007373 2.6e-267 925.2 605 75.2
Nitab4.5_0001599g0180 Nicotiana tabacum HOM05D005975 ORTHO05D007373 9.8e-267 923.3 605 75.9
FAN08G0232 Fragaria x ananassa HOM05D005975 ORTHO05D007373 2.8e-266 921.8 605 74.2
Cc04_g07500 Coffea canephora HOM05D005975 ORTHO05D007373 2.4e-265 918.7 606 74.4
FvH4_5g12680 Fragaria vesca HOM05D005975 ORTHO05D007373 2.4e-265 918.7 609 73.7
FAN18G3396 Fragaria x ananassa HOM05D005975 ORTHO05D007373 1.2e-264 916.4 609 73.6
Atru.chr9.776 Acer truncatum HOM05D005975 ORTHO05D007373 4.5e-264 914.4 607 74.1
Haze_18619 Corylus avellana HOM05D005975 ORTHO05D007373 2.3e-263 912.1 603 74.3
FAN04G2679 Fragaria x ananassa HOM05D005975 ORTHO05D007373 2.3e-263 912.1 603 74.0
FAN13G1844 Fragaria x ananassa HOM05D005975 ORTHO05D007373 5.0e-263 911.0 603 73.8
Eucgr.B00701 Eucalyptus grandis HOM05D005975 ORTHO05D007373 8.6e-263 910.2 604 72.4
Gorai.007G007400 Gossypium raimondii HOM05D005975 ORTHO05D007373 5.6e-262 907.5 614 73.0
Nitab4.5_0000410g0070 Nicotiana tabacum HOM05D005975 ORTHO05D007373 5.6e-262 907.5 589 76.6
CiPaw.15G127100 Carya illinoinensis HOM05D005975 ORTHO05D007373 1.6e-261 906.0 605 74.0
Manes.05G139300 Manihot esculenta HOM05D005975 ORTHO05D007373 1.6e-261 906.0 606 73.9
Gohir.D11G006100 Gossypium hirsutum HOM05D005975 ORTHO05D007373 4.7e-261 904.4 614 72.5
Gohir.A11G007000 Gossypium hirsutum HOM05D005975 ORTHO05D007373 1.8e-260 902.5 614 72.3
MD06G1211600 Malus domestica HOM05D005975 ORTHO05D007373 3.0e-260 901.7 606 71.9
Lj9A429T54 Lonicera japonica HOM05D005975 ORTHO05D007373 8.9e-260 900.2 607 73.1
Sabra12G0043300 Salix brachista HOM05D005975 ORTHO05D007373 3.4e-259 898.3 605 72.9
MD14G1222100 Malus domestica HOM05D005975 ORTHO05D007373 5.8e-259 897.5 606 71.5
PGR083G1175 Punica granatum HOM05D005975 ORTHO05D007373 9.8e-259 896.7 608 72.2
Duzib205G1016 Durio zibethinus HOM05D005975 ORTHO05D007373 6.4e-258 894.0 607 73.5
Potri.012G060200 Populus trichocarpa HOM05D005975 ORTHO05D007373 7.0e-257 890.6 606 72.1
GSVIVG01008239001 Vitis vinifera HOM05D005975 ORTHO05D007373 2.0e-256 889.0 605 73.1
CSS0000913 Camellia sinensis var. sinensis HOM05D005975 ORTHO05D007373 4.6e-256 887.9 624 71.5
SalBow5G4970 Salvia bowleyana HOM05D005975 ORTHO05D007373 6.0e-256 887.5 550 80.5
Ciclev10019197m.g Citrus clementina HOM05D005975 ORTHO05D007373 7.8e-256 887.1 607 71.8
Hund02524 Selenicereus undatus HOM05D005975 ORTHO05D007373 1.3e-255 886.3 608 73.0
unitig_22.g6248 Utricularia gibba HOM05D005975 ORTHO05D007373 3.3e-254 881.7 600 72.2
EL10Ac5g11254 Beta vulgaris HOM05D005975 ORTHO05D007373 4.3e-254 881.3 605 71.6
AUR62036958 Chenopodium quinoa HOM05D005975 ORTHO05D007373 7.3e-254 880.6 608 72.2
AUR62032193 Chenopodium quinoa HOM05D005975 ORTHO05D007373 3.6e-253 878.2 608 72.0
DCAR_015134 Daucus carota HOM05D005975 ORTHO05D007373 4.7e-253 877.9 606 71.5
Actinidia31028 Actinidia chinensis HOM05D005975 ORTHO05D007373 1.1e-252 876.7 607 71.8
ClCG06G015000 Citrullus lanatus HOM05D005975 ORTHO05D007373 2.3e-252 875.5 605 71.6
TAR374G1293 Trochodendron aralioides HOM05D005975 ORTHO05D007373 3.1e-252 875.2 607 70.7
MELO3C017289.2 Cucumis melo HOM05D005975 ORTHO05D007373 1.2e-251 873.2 605 71.7
Sed0024013 Sechium edule HOM05D005975 ORTHO05D007373 1.5e-251 872.8 605 71.6
ECA232G0421 Erigeron canadensis HOM05D005975 ORTHO05D007373 2.0e-251 872.5 606 70.5
Potri.015G049900 Populus trichocarpa HOM05D005975 ORTHO05D007373 5.8e-251 870.9 602 71.3
TAR622G0473 Trochodendron aralioides HOM05D005975 ORTHO05D007373 9.8e-251 870.2 608 69.7
vmacro17674 Vaccinium macrocarpon HOM05D005975 ORTHO05D007373 9.8e-251 870.2 612 70.6
CsaV3_1G003650 Cucumis sativus L. HOM05D005975 ORTHO05D007373 1.3e-250 869.8 605 72.1
Cpa.g.sc549.1 Carica papaya HOM05D005975 ORTHO05D007373 4.9e-250 867.8 601 71.5
PSO063G1047 Papaver somniferum HOM05D005975 ORTHO05D007373 6.4e-250 867.5 602 69.9
PSO782G2585 Papaver somniferum HOM05D005975 ORTHO05D007373 1.9e-249 865.9 601 69.9
Rhsim08G0136800 Rhododendron simsii HOM05D005975 ORTHO05D007373 3.2e-249 865.1 611 70.0
HanXRQChr09g0269781 Helianthus annuus HOM05D005975 ORTHO05D007373 4.1e-249 864.8 611 70.2
Hund10002 Selenicereus undatus HOM05D005975 ORTHO05D007373 1.3e-247 859.8 606 70.5
VMungo1309G0041 Vigna mungo HOM05D005975 ORTHO05D007373 2.3e-247 859.0 601 70.5
arahy.Tifrunner.gnm1.ann1.1K5T8S Arachis hypogaea HOM05D005975 ORTHO05D007373 1.1e-246 856.7 606 69.8
Ah.11g047090 Amaranthus hybridus HOM05D005975 ORTHO05D007373 2.5e-246 855.5 605 69.9
Lalb_Chr12g0197601 Lupinus albus HOM05D005975 ORTHO05D007373 2.1e-245 852.4 608 68.3
Phvul.009G200500 Phaseolus vulgaris HOM05D005975 ORTHO05D007373 4.7e-245 851.3 605 69.3
Aqoxy3G03906 Aquilegia oxysepala HOM05D005975 ORTHO05D007373 4.4e-243 844.7 607 67.9
Glyma.17G121100 Glycine max HOM05D005975 ORTHO05D007373 2.2e-242 842.4 602 68.3
Lj1g0009400 Lotus japonicus HOM05D005975 ORTHO05D007373 4.9e-242 841.3 608 69.7
Ca_23135_v3 Cicer arietinum L. HOM05D005975 ORTHO05D007373 8.3e-242 840.5 606 69.5
Thhalv10018286m.g Eutrema salsugineum HOM05D005975 ORTHO05D007373 1.1e-241 840.1 605 68.3
Sc10g0009550 Simmondsia chinensis HOM05D005975 ORTHO05D007373 7.1e-241 837.4 607 68.9
CARHR067040 Cardamine hirsuta HOM05D005975 ORTHO05D007373 1.2e-240 836.6 605 67.6
Glyma.06G210800 Glycine max HOM05D005975 ORTHO05D007373 2.1e-240 835.9 607 67.9
Glyma.04G152200 Glycine max HOM05D005975 ORTHO05D007373 4.6e-240 834.7 607 67.9
AL2G33760 Arabidopsis lyrata HOM05D005975 ORTHO05D007373 1.0e-239 833.6 605 67.4
Lsat_1_v5_gn_3_10441 Lactuca sativa HOM05D005975 ORTHO05D007373 1.7e-239 832.8 606 68.0
AT1G73930 Arabidopsis thaliana HOM05D005975 ORTHO05D007373 3.9e-239 831.6 605 67.3
TPR.G10356 Trifolium pratense HOM05D005975 ORTHO05D007373 5.1e-239 831.2 610 68.5
Psat1g024880 Pisum sativum HOM05D005975 ORTHO05D007373 4.3e-238 828.2 606 68.6
THA.LOC104808292 Tarenaya hassleriana HOM05D005975 ORTHO05D007373 4.3e-238 828.2 601 66.7
VMungo1215G0359 Vigna mungo HOM05D005975 ORTHO05D007373 1.3e-234 816.6 609 64.7
BolC2t09180H Brassica oleracea HOM05D005975 ORTHO05D007373 4.2e-233 811.6 609 65.7
MBI19_g38388_MAGBIO Magnolia biondii HOM05D005975 ORTHO05D007373 4.2e-233 811.6 605 66.8
A02p18950 Brassica napus HOM05D005975 ORTHO05D007373 5.4e-233 811.2 609 66.0
BraA02t06937Z Brassica rapa HOM05D005975 ORTHO05D007373 5.4e-233 811.2 609 65.7
BcaB05g24819 Brassica carinata HOM05D005975 ORTHO05D007373 7.1e-233 810.8 608 66.1
BcaC03g15468 Brassica carinata HOM05D005975 ORTHO05D007373 7.3e-230 800.8 609 65.2
C02p31490 Brassica napus HOM05D005975 ORTHO05D007373 6.2e-229 797.7 609 65.0
Sp5g29130 Schrenkiella parvula HOM05D005975 ORTHO05D007373 2.2e-226 789.3 605 65.3
ATR0753G136 Amborella trichopoda HOM05D005975 ORTHO05D007373 1.3e-223 780.0 669 58.9
Aa31LG4G4220 Aethionema arabicum HOM05D005975 ORTHO05D007373 2.1e-221 772.7 605 63.8
Prupe.5G217600 Prunus persica HOM05D005975 ORTHO05D007373 2.6e-219 765.8 473 77.6
SEGI_09157 Sequoiadendron giganteum HOM05D005975 ORTHO05D007373 1.3e-213 746.9 734 53.1
Sabra15G0077800 Salix brachista HOM05D005975 ORTHO05D007373 3.2e-201 705.7 606 60.7
Os03g0259700 Oryza sativa ssp. japonica HOM05D005975 ORTHO05D007373 7.1e-201 704.5 614 59.0
Phvul.003G176900 Phaseolus vulgaris HOM05D005975 ORTHO05D007373 6.9e-196 688.0 469 69.7
Zm00001eb011310 Zea mays HOM05D005975 ORTHO05D007373 1.5e-195 686.8 616 57.3
Pp3c4_11450 Physcomitrium patens HOM05D005975 ORTHO05D007373 1.3e-194 683.7 698 49.9
Pp3c12_18170 Physcomitrium patens HOM05D005975 ORTHO05D007373 8.5e-194 681.0 700 49.9
AagrBONN_evm.TU.Sc2ySwM_228.4839 Anthoceros agrestis HOM05D005975 ORTHO05D007373 1.2e-192 677.2 764 48.6
Mapoly0016s0160 Marchantia polymorpha HOM05D005975 ORTHO05D007373 2.9e-186 656.0 799 45.1
COL.COLO4_22722 Corchorus olitorius HOM05D005975 ORTHO05D007373 1.2e-179 634.0 400 77.8
Glyma.05G013100 Glycine max HOM05D005975 ORTHO05D007373 7.7e-179 631.3 600 54.8
SMO367G0788 Selaginella moellendorffii HOM05D005975 ORTHO05D007373 5.7e-174 615.1 614 52.3
Carub.0002s2070 Capsella rubella HOM05D005975 ORTHO05D007373 3.6e-168 595.9 408 69.9
CDE05G1454 Ceratophyllum demersum HOM05D005975 ORTHO05D007373 3.8e-162 575.9 543 56.9
Nn3g17719 Nelumbo nucifera HOM05D005975 ORTHO05D007373 5.5e-161 572.0 423 66.0
CBR_g30105 Chara braunii HOM05D005975 ORTHO05D007373 1.5e-153 547.4 512 53.1
TAR622G1340 Trochodendron aralioides HOM05D005975 ORTHO05D007373 1.3e-125 454.5 367 62.4
PSO074G0001 Papaver somniferum HOM05D005975 ORTHO05D007373 4.7e-120 436.0 309 67.6
CDE05G3359 Ceratophyllum demersum HOM05D005975 ORTHO05D007373 1.3e-114 417.9 398 56.3
HPP92_016579 Vanilla planifolia HOM05D005975 ORTHO05D007373 7.3e-105 385.6 338 60.1
arahy.Tifrunner.gnm1.ann1.CEL6SJ Arachis hypogaea HOM05D005975 ORTHO05D007373 1.6e-104 384.4 264 71.2
BcaB05g24817 Brassica carinata HOM05D005975 ORTHO05D007373 2.2e-85 320.9 215 70.2
SMO146G0145 Selaginella moellendorffii HOM05D005975 ORTHO05D007373 4.2e-84 316.6 336 50.0
HPP92_016580 Vanilla planifolia HOM05D005975 ORTHO05D007373 6.3e-80 302.8 196 73.0
Zm00001eb237870 Zea mays HOM05D005975 ORTHO05D007373 1.3e-77 295.0 551 37.4
Zm00001eb078910 Zea mays HOM05D005975 ORTHO05D007373 3.3e-57 227.3 153 68.6
Nn3g18207 Nelumbo nucifera HOM05D005975 ORTHO05D007373 2.9e-37 161.0 139 56.1
Cre14.g633500 Chlamydomonas reinhardtii HOM05D005975 ORTHO05D007373 1.1e-36 159.1 321 34.0
CDE05G0573 Ceratophyllum demersum HOM05D005975 ORTHO05D007373 2.6e-25 121.3 85 63.5
Nn4g23789 Nelumbo nucifera HOM05D005975 ORTHO05D007373 2.4e-07 61.6 47 59.6


User provided reference genes

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