Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.22702 Avicennia marina HOM05D004831 ORTHO05D003975 0.0e+00 1231.1 648 100.0
SGA_v2.0_scaffold37G14809 Striga asiatica HOM05D004831 ORTHO05D003975 1.5e-153 547.4 764 46.6
Migut.I00846 Erythranthe guttata HOM05D004831 ORTHO05D003975 2.6e-153 546.6 569 58.3
Oeu024063.2 Olea europaea HOM05D004831 ORTHO05D003975 4.5e-137 492.7 650 49.1
Oeu021950.1 Olea europaea HOM05D004831 ORTHO05D003975 4.9e-136 489.2 794 43.2
Cc04_g03580 Coffea canephora HOM05D004831 ORTHO05D003975 3.3e-100 370.2 678 40.1
Dinv30528 Davidia involucrata HOM05D004831 ORTHO05D003975 2.2e-99 367.5 764 35.6
CAN.G438.52 Capsicum annuum HOM05D004831 ORTHO05D003975 4.5e-97 359.8 720 37.9
Sopen03g039230 Solanum pennellii HOM05D004831 ORTHO05D003975 1.2e-94 351.7 737 36.9
Peaxi162Scf00015g00247 Petunia axillaris HOM05D004831 ORTHO05D003975 2.7e-94 350.5 762 36.9
Solyc03g120340.3 Solanum lycopersicum HOM05D004831 ORTHO05D003975 8.0e-94 349.0 737 36.9
PGSC0003DMG400002560 Solanum tuberosum HOM05D004831 ORTHO05D003975 2.6e-92 344.0 771 35.5
unitig_62.g23772 Utricularia gibba HOM05D004831 ORTHO05D003975 4.4e-92 343.2 725 38.6
TAR383G0472 Trochodendron aralioides HOM05D004831 ORTHO05D003975 4.1e-82 310.1 725 35.9
GSVIVG01017152001 Vitis vinifera HOM05D004831 ORTHO05D003975 1.2e-81 308.5 543 40.7
TAR374G0326 Trochodendron aralioides HOM05D004831 ORTHO05D003975 1.0e-80 305.4 716 35.5
TAR626G1756 Trochodendron aralioides HOM05D004831 ORTHO05D003975 1.0e-80 305.4 716 35.5
QL05p025363 Quercus lobata HOM05D004831 ORTHO05D003975 6.1e-78 296.2 778 35.1
CSS0014524 Camellia sinensis var. sinensis HOM05D004831 ORTHO05D003975 1.8e-77 294.7 843 32.3
Dinv38059 Davidia involucrata HOM05D004831 ORTHO05D003975 2.3e-77 294.3 765 33.3
MELO3C023366.2 Cucumis melo HOM05D004831 ORTHO05D003975 1.7e-75 288.1 747 33.5
Nn8g39278 Nelumbo nucifera HOM05D004831 ORTHO05D003975 1.7e-75 288.1 726 35.1
TWI18G0228 Tripterygium wilfordii HOM05D004831 ORTHO05D003975 1.7e-75 288.1 695 34.2
Lj5A62T33 Lonicera japonica HOM05D004831 ORTHO05D003975 9.1e-74 282.3 789 32.7
Actinidia01793 Actinidia chinensis HOM05D004831 ORTHO05D003975 2.7e-73 280.8 855 30.3
ClCG09G002300 Citrullus lanatus HOM05D004831 ORTHO05D003975 2.7e-73 280.8 752 33.1
vmacro18933 Vaccinium macrocarpon HOM05D004831 ORTHO05D003975 4.5e-73 280.0 755 33.4
Rhsim08G0218700 Rhododendron simsii HOM05D004831 ORTHO05D003975 1.3e-72 278.5 759 34.9
Nitab4.5_0003159g0050 Nicotiana tabacum HOM05D004831 ORTHO05D003975 5.0e-72 276.6 811 32.9
Actinidia15826 Actinidia chinensis HOM05D004831 ORTHO05D003975 8.6e-72 275.8 428 40.7
Nitab4.5_0003885g0040 Nicotiana tabacum HOM05D004831 ORTHO05D003975 8.6e-72 275.8 800 33.6
TWI12G0693 Tripterygium wilfordii HOM05D004831 ORTHO05D003975 4.2e-71 273.5 706 34.6
CsaV3_7G033010 Cucumis sativus L. HOM05D004831 ORTHO05D003975 1.2e-70 271.9 742 32.2
Gohir.D10G072500 Gossypium hirsutum HOM05D004831 ORTHO05D003975 8.9e-69 265.8 748 32.6
Sed0027172 Sechium edule HOM05D004831 ORTHO05D003975 1.2e-68 265.4 694 34.4
Gorai.011G078100 Gossypium raimondii HOM05D004831 ORTHO05D003975 3.4e-68 263.8 753 32.9
Eucgr.F03008 Eucalyptus grandis HOM05D004831 ORTHO05D003975 1.7e-67 261.5 701 33.2
Gohir.A10G079000 Gossypium hirsutum HOM05D004831 ORTHO05D003975 1.7e-67 261.5 753 32.7
Ca_24215_v3 Cicer arietinum L. HOM05D004831 ORTHO05D003975 1.8e-66 258.1 719 33.8
Hma1.2p1_2171F.1_g315970 Hydrangea macrophylla HOM05D004831 ORTHO05D003975 5.4e-66 256.5 738 32.2
Lsat_1_v5_gn_1_34820 Lactuca sativa HOM05D004831 ORTHO05D003975 1.2e-65 255.4 662 34.1
Manes.11G052100 Manihot esculenta HOM05D004831 ORTHO05D003975 2.0e-65 254.6 763 31.5
Lj3g0022365 Lotus japonicus HOM05D004831 ORTHO05D003975 5.9e-65 253.1 723 32.4
CiPaw.02G152200 Carya illinoinensis HOM05D004831 ORTHO05D003975 3.8e-64 250.4 396 43.7
Hma1.2p1_0682F.1_g202670 Hydrangea macrophylla HOM05D004831 ORTHO05D003975 5.0e-64 250.0 640 34.2
Duzib235G0180 Durio zibethinus HOM05D004831 ORTHO05D003975 1.5e-63 248.4 712 33.3
Lalb_Chr24g0395761 Lupinus albus HOM05D004831 ORTHO05D003975 1.5e-63 248.4 727 32.2
CANSAT56G2043 Cannabis sativa HOM05D004831 ORTHO05D003975 1.6e-62 245.0 774 31.9
Hma1.2p1_0323F.1_g125270 Hydrangea macrophylla HOM05D004831 ORTHO05D003975 1.0e-61 242.3 690 32.0
MBI01_g10032_MAGBIO Magnolia biondii HOM05D004831 ORTHO05D003975 1.4e-61 241.9 649 33.3
Potri.001G178200 Populus trichocarpa HOM05D004831 ORTHO05D003975 3.0e-61 240.7 719 31.4
Potri.003G056600 Populus trichocarpa HOM05D004831 ORTHO05D003975 8.9e-61 239.2 775 31.4
Thecc.06G083000 Theobroma cacao HOM05D004831 ORTHO05D003975 1.5e-60 238.4 741 32.1
Cfa002050 Carpinus fangiana HOM05D004831 ORTHO05D003975 1.3e-59 235.3 466 39.7
Medtr8g467560 Medicago truncatula HOM05D004831 ORTHO05D003975 2.9e-59 234.2 726 32.9
Gohir.A09G084100 Gossypium hirsutum HOM05D004831 ORTHO05D003975 4.9e-59 233.4 651 33.5
Prupe.3G073700 Prunus persica HOM05D004831 ORTHO05D003975 8.3e-59 232.6 754 31.2
Gohir.D09G083900 Gossypium hirsutum HOM05D004831 ORTHO05D003975 1.0e-56 225.7 651 33.0
Sabra03G0032100 Salix brachista HOM05D004831 ORTHO05D003975 3.9e-56 223.8 786 30.8
arahy.Tifrunner.gnm1.ann1.5CE7DY Arachis hypogaea HOM05D004831 ORTHO05D003975 5.0e-56 223.4 714 31.0
Gorai.006G099900 Gossypium raimondii HOM05D004831 ORTHO05D003975 5.0e-56 223.4 651 32.3
DCAR_026304 Daucus carota HOM05D004831 ORTHO05D003975 9.5e-55 219.2 591 33.0
Duzib160G0042 Durio zibethinus HOM05D004831 ORTHO05D003975 3.6e-54 217.2 653 33.1
Ciclev10024870m.g Citrus clementina HOM05D004831 ORTHO05D003975 8.0e-54 216.1 877 28.4
Medtr6g068960 Medicago truncatula HOM05D004831 ORTHO05D003975 1.1e-53 215.7 637 32.5
Phvul.002G299500 Phaseolus vulgaris HOM05D004831 ORTHO05D003975 6.8e-53 213.0 646 32.5
HanXRQChr05g0163461 Helianthus annuus HOM05D004831 ORTHO05D003975 4.4e-52 210.3 683 31.6
Cpa.g.sc10.161 Carica papaya HOM05D004831 ORTHO05D003975 9.8e-52 209.1 840 28.7
HanXRQChr02g0032681 Helianthus annuus HOM05D004831 ORTHO05D003975 1.7e-51 208.4 689 31.9
Atru.chr1.3226 Acer truncatum HOM05D004831 ORTHO05D003975 2.9e-51 207.6 838 27.7
Sc15g0001240 Simmondsia chinensis HOM05D004831 ORTHO05D003975 3.7e-51 207.2 854 27.5
RcHm_v2.0_Chr2g0137511 Rosa chinensis HOM05D004831 ORTHO05D003975 8.3e-51 206.1 743 29.9
Hund06602 Selenicereus undatus HOM05D004831 ORTHO05D003975 2.4e-50 204.5 786 29.1
Glyma.15G013200 Glycine max HOM05D004831 ORTHO05D003975 7.0e-50 203.0 835 29.9
AUR62016432 Chenopodium quinoa HOM05D004831 ORTHO05D003975 2.7e-49 201.1 712 30.6
EL10Ac9g21986 Beta vulgaris HOM05D004831 ORTHO05D003975 4.6e-49 200.3 742 30.3
AUR62011616 Chenopodium quinoa HOM05D004831 ORTHO05D003975 4.6e-49 200.3 745 30.1
Aa31sc115G30 Aethionema arabicum HOM05D004831 ORTHO05D003975 1.0e-48 199.1 793 29.1
Aa31LG7G15290 Aethionema arabicum HOM05D004831 ORTHO05D003975 2.5e-47 194.5 751 29.6
COL.COLO4_30332 Corchorus olitorius HOM05D004831 ORTHO05D003975 1.2e-46 192.2 373 37.8
Glyma.13G360700 Glycine max HOM05D004831 ORTHO05D003975 2.8e-46 191.0 849 27.7
Lsat_1_v5_gn_9_45780 Lactuca sativa HOM05D004831 ORTHO05D003975 1.4e-45 188.7 602 32.4
arahy.Tifrunner.gnm1.ann1.3B4S3M Arachis hypogaea HOM05D004831 ORTHO05D003975 5.2e-45 186.8 711 30.2
Lalb_Chr15g0078831 Lupinus albus HOM05D004831 ORTHO05D003975 1.2e-44 185.7 700 31.4
FvH4_6g30920 Fragaria vesca HOM05D004831 ORTHO05D003975 1.7e-43 181.8 722 28.8
arahy.Tifrunner.gnm1.ann1.Y8U4CK Arachis hypogaea HOM05D004831 ORTHO05D003975 3.7e-43 180.6 678 30.1
PGR102G0340 Punica granatum HOM05D004831 ORTHO05D003975 1.2e-41 175.6 570 31.2
FAN14G0810 Fragaria x ananassa HOM05D004831 ORTHO05D003975 2.1e-41 174.9 759 27.5
FAN09G2060 Fragaria x ananassa HOM05D004831 ORTHO05D003975 7.8e-41 172.9 761 26.9
Sed0009949 Sechium edule HOM05D004831 ORTHO05D003975 7.8e-41 172.9 513 32.9
TPR.G31352 Trifolium pratense HOM05D004831 ORTHO05D003975 1.3e-40 172.2 873 25.9
arahy.Tifrunner.gnm1.ann1.NQW8T9 Arachis hypogaea HOM05D004831 ORTHO05D003975 3.9e-40 170.6 406 33.3
Manes.04G121450 Manihot esculenta HOM05D004831 ORTHO05D003975 5.1e-40 170.2 517 30.6
CARHR016160 Cardamine hirsuta HOM05D004831 ORTHO05D003975 6.6e-40 169.9 737 28.9
Ah.01g021180 Amaranthus hybridus HOM05D004831 ORTHO05D003975 1.1e-39 169.1 741 28.5
MD17G1197700 Malus domestica HOM05D004831 ORTHO05D003975 4.3e-39 167.2 685 27.6
Migut.I00847 Erythranthe guttata HOM05D004831 ORTHO05D003975 8.1e-38 162.9 107 76.6
Phvul.005G172500 Phaseolus vulgaris HOM05D004831 ORTHO05D003975 2.4e-37 161.4 539 32.8
ECA247G1173 Erigeron canadensis HOM05D004831 ORTHO05D003975 4.0e-37 160.6 708 27.0
DCAR_009558 Daucus carota HOM05D004831 ORTHO05D003975 2.6e-36 157.9 418 33.7
PSO782G5420 Papaver somniferum HOM05D004831 ORTHO05D003975 4.4e-36 157.1 408 33.1
BcaC05g25641 Brassica carinata HOM05D004831 ORTHO05D003975 1.9e-34 151.8 742 26.7
BolC5t30118H Brassica oleracea HOM05D004831 ORTHO05D003975 2.4e-34 151.4 742 27.1
PSO063G2677 Papaver somniferum HOM05D004831 ORTHO05D003975 2.4e-34 151.4 421 31.1
BraA06t24347Z Brassica rapa HOM05D004831 ORTHO05D003975 4.2e-34 150.6 745 26.6
AT1G15660 Arabidopsis thaliana HOM05D004831 ORTHO05D003975 5.4e-34 150.2 738 26.0
Thhalv10006918m.g Eutrema salsugineum HOM05D004831 ORTHO05D003975 1.6e-33 148.7 758 25.1
Psat4g139520 Pisum sativum HOM05D004831 ORTHO05D003975 2.7e-33 147.9 512 30.1
A06p11680 Brassica napus HOM05D004831 ORTHO05D003975 4.6e-33 147.1 745 27.0
THA.LOC104812471 Tarenaya hassleriana HOM05D004831 ORTHO05D003975 4.6e-33 147.1 761 26.3
CDE04G1285 Ceratophyllum demersum HOM05D004831 ORTHO05D003975 3.9e-32 144.1 797 26.0
ATR0037G028 Amborella trichopoda HOM05D004831 ORTHO05D003975 1.1e-31 142.5 696 26.4
Sp1g13970 Schrenkiella parvula HOM05D004831 ORTHO05D003975 7.3e-31 139.8 725 24.4
Carub.0001s1544 Capsella rubella HOM05D004831 ORTHO05D003975 4.7e-30 137.1 740 25.8
C05p13810 Brassica napus HOM05D004831 ORTHO05D012057 4.0e-29 134.0 650 26.9
Haze_16453 Corylus avellana HOM05D004831 ORTHO05D003975 2.6e-28 131.3 553 27.8
AL1G27760 Arabidopsis lyrata HOM05D004831 ORTHO05D003975 3.4e-28 131.0 740 24.7
FAN02G3038 Fragaria x ananassa HOM05D004831 ORTHO05D003975 3.4e-28 131.0 618 27.0
Aqoxy7G01849 Aquilegia oxysepala HOM05D004831 ORTHO05D003975 1.3e-27 129.0 739 27.2
ClCG05G013830 Citrullus lanatus HOM05D004831 ORTHO05D003975 1.9e-26 125.2 377 33.2
BcaC05g25510 Brassica carinata HOM05D004831 ORTHO05D003975 6.0e-25 120.2 755 25.2
Duzib192G1036 Durio zibethinus HOM05D004831 ORTHO05D003975 8.7e-24 116.3 381 31.8
TAR624G1194 Trochodendron aralioides HOM05D004831 ORTHO05D003975 6.4e-19 100.1 114 44.7
Actinidia15827 Actinidia chinensis HOM05D004831 ORTHO05D003975 6.0e-17 93.6 178 40.4
COL.COLO4_30333 Corchorus olitorius HOM05D004831 ORTHO05D003975 1.5e-15 89.0 126 44.4
Aa31LG7G300 Aethionema arabicum HOM05D004831 ORTHO05D003975 4.3e-15 87.4 588 24.5
MD09G1215000 Malus domestica HOM05D004831 ORTHO05D003975 2.0e-12 78.6 144 34.7
Haze_24989 Corylus avellana HOM05D004831 ORTHO05D003975 4.5e-12 77.4 210 32.9
SHI09311 Sapria himalayana HOM05D004831 ORTHO05D003975 4.5e-12 77.4 139 38.8
TPR.G24077 Trifolium pratense HOM05D004831 ORTHO05D003975 1.7e-11 75.5 144 38.9
HPP92_017895 Vanilla planifolia HOM05D004831 ORTHO05D003975 2.2e-11 75.1 155 40.0
Aa31LG7G290 Aethionema arabicum HOM05D004831 ORTHO05D003975 3.8e-11 74.3 151 33.1
Haze_16456 Corylus avellana HOM05D004831 ORTHO05D003975 1.4e-10 72.4 123 39.8
SHI09312 Sapria himalayana HOM05D004831 ORTHO05D003975 6.0e-09 67.0 178 28.7
Zm00001eb159780 Zea mays HOM05D018572 ORTHO05D003975 1.8e-08 65.5 125 36.8
BcaB03g14531 Brassica carinata HOM05D004831 ORTHO05D017393 8.7e-08 63.2 180 28.9
Mapoly0008s0161 Marchantia polymorpha HOM05D004831 ORTHO05D003975 9.6e-07 59.7 168 33.9
Os01g0617700 Oryza sativa ssp. japonica HOM05D004831 ORTHO05D003975 1.6e-06 58.9 168 30.4
AagrBONN_evm.TU.Sc2ySwM_368.483__484 Anthoceros agrestis HOM05D004831 ORTHO05D003975 3.7e-06 57.8 136 34.6
SMO203G0255 Selaginella moellendorffii HOM05D004831 ORTHO05D003975 3.7e-06 57.8 82 40.2


User provided reference genes

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