Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.22673 Avicennia marina HOM05D003621 ORTHO05D004259 4.7e-149 531.2 272 100.0
Migut.I00952 Erythranthe guttata HOM05D003621 ORTHO05D004259 4.1e-92 342.0 275 66.5
Dinv30495 Davidia involucrata HOM05D003621 ORTHO05D004259 8.6e-58 228.0 277 46.9
Hma1.2p1_1455F.1_g284390 Hydrangea macrophylla HOM05D003621 ORTHO05D004259 4.9e-53 212.2 275 45.1
CSS0027044 Camellia sinensis var. sinensis HOM05D003621 ORTHO05D004259 3.1e-31 139.8 287 32.4
Actinidia09421 Actinidia chinensis HOM05D003621 ORTHO05D004259 2.0e-30 137.1 278 31.7
CSS0004511 Camellia sinensis var. sinensis HOM05D003621 ORTHO05D004259 2.0e-30 137.1 278 32.4
CSS0049361 Camellia sinensis var. sinensis HOM05D003621 ORTHO05D004259 3.4e-30 136.3 287 31.7
Peaxi162Scf00231g00033 Petunia axillaris HOM05D003621 ORTHO05D004259 4.4e-30 136.0 278 32.4
Gohir.A07G006000 Gossypium hirsutum HOM05D003621 ORTHO05D004259 7.6e-30 135.2 278 32.7
Nitab4.5_0002904g0090 Nicotiana tabacum HOM05D003621 ORTHO05D004259 9.9e-30 134.8 278 31.7
Nitab4.5_0000114g0080 Nicotiana tabacum HOM05D003621 ORTHO05D004259 1.3e-29 134.4 278 31.7
Gorai.001G005600 Gossypium raimondii HOM05D003621 ORTHO05D004259 1.7e-29 134.0 278 32.7
SGA_v2.0_scaffold30G12371 Striga asiatica HOM05D003621 ORTHO05D004259 1.7e-29 134.0 254 31.9
SalBow6G0300 Salvia bowleyana HOM05D003621 ORTHO05D004259 3.8e-29 132.9 274 33.9
Gohir.D13G202000 Gossypium hirsutum HOM05D003621 ORTHO05D004259 4.9e-29 132.5 278 32.7
Gorai.013G230900 Gossypium raimondii HOM05D003621 ORTHO05D004259 4.9e-29 132.5 278 32.7
Gohir.D07G006000 Gossypium hirsutum HOM05D003621 ORTHO05D004259 6.4e-29 132.1 278 32.4
RhsimUnG0196500 Rhododendron simsii HOM05D003621 ORTHO05D004259 6.4e-29 132.1 279 31.5
Cfa021562 Carpinus fangiana HOM05D003621 ORTHO05D004259 8.4e-29 131.7 278 32.0
Os02g0266300 Oryza sativa ssp. japonica HOM05D003621 ORTHO05D004259 8.4e-29 131.7 284 32.7
Peaxi162Scf00546g00023 Petunia axillaris HOM05D003621 ORTHO05D004259 8.4e-29 131.7 278 31.7
Gohir.A13G196700 Gossypium hirsutum HOM05D003621 ORTHO05D004259 1.1e-28 131.3 278 32.4
Lalb_Chr14g0371541 Lupinus albus HOM05D003621 ORTHO05D004259 1.1e-28 131.3 278 32.4
Hund26199 Selenicereus undatus HOM05D003621 ORTHO05D004259 1.1e-28 131.3 279 31.9
FAN23G2072 Fragaria x ananassa HOM05D003621 ORTHO05D004259 1.4e-28 131.0 278 30.9
FAN26G0011 Fragaria x ananassa HOM05D003621 ORTHO05D004259 1.4e-28 131.0 278 30.9
HanXRQChr10g0318561 Helianthus annuus HOM05D003621 ORTHO05D004259 1.4e-28 131.0 247 33.2
Nitab4.5_0005947g0020 Nicotiana tabacum HOM05D003621 ORTHO05D004259 1.4e-28 131.0 278 31.3
PGSC0003DMG400030220 Solanum tuberosum HOM05D003621 ORTHO05D004259 1.4e-28 131.0 278 30.9
Ciclev10008142m.g Citrus clementina HOM05D003621 ORTHO05D004259 1.9e-28 130.6 278 32.7
FvH4_1g04710 Fragaria vesca HOM05D003621 ORTHO05D004259 1.9e-28 130.6 278 31.3
FAN19G2426 Fragaria x ananassa HOM05D003621 ORTHO05D004259 1.9e-28 130.6 278 31.3
Sopen07g012210 Solanum pennellii HOM05D003621 ORTHO05D004259 1.9e-28 130.6 278 30.9
MD02G1046000 Malus domestica HOM05D003621 ORTHO05D004259 2.4e-28 130.2 278 32.0
Oeu044981.1 Olea europaea HOM05D003621 ORTHO05D004259 2.4e-28 130.2 278 30.9
PGR142G3711 Punica granatum HOM05D003621 ORTHO05D004259 2.4e-28 130.2 278 31.7
Haze_25731 Corylus avellana HOM05D003621 ORTHO05D004259 3.2e-28 129.8 278 31.7
Migut.G00929 Erythranthe guttata HOM05D003621 ORTHO05D004259 3.2e-28 129.8 245 34.3
FAN28G1412 Fragaria x ananassa HOM05D003621 ORTHO05D004259 3.2e-28 129.8 278 30.9
RcHm_v2.0_Chr2g0090311 Rosa chinensis HOM05D003621 ORTHO05D004259 4.2e-28 129.4 278 31.3
ATR0315G144 Amborella trichopoda HOM05D003621 ORTHO05D004259 5.4e-28 129.0 278 32.0
SalBow6G5466 Salvia bowleyana HOM05D003621 ORTHO05D000122 5.4e-28 129.0 278 33.5
Glyma.09G191100 Glycine max HOM05D003621 ORTHO05D004259 7.1e-28 128.6 278 32.4
Manes.16G115500 Manihot esculenta HOM05D003621 ORTHO05D004259 7.1e-28 128.6 278 32.0
Hund09208 Selenicereus undatus HOM05D003621 ORTHO05D004259 7.1e-28 128.6 279 31.9
Haze_25724 Corylus avellana HOM05D003621 ORTHO05D004259 9.3e-28 128.3 278 31.7
Hma1.2p1_0018F.1_g013590 Hydrangea macrophylla HOM05D003621 ORTHO05D004259 9.3e-28 128.3 278 32.0
Prupe.7G232000 Prunus persica HOM05D003621 ORTHO05D004259 9.3e-28 128.3 278 30.9
SalBow6G2522 Salvia bowleyana HOM05D003621 ORTHO05D004259 9.3e-28 128.3 275 33.8
CsaV3_3G015870 Cucumis sativus L. HOM05D003621 ORTHO05D004259 1.2e-27 127.9 278 30.9
Solyc12g007100.2 Solanum lycopersicum HOM05D003621 ORTHO05D004259 1.2e-27 127.9 278 30.9
Atru.chr7.1358 Acer truncatum HOM05D003621 ORTHO05D004259 1.6e-27 127.5 247 34.4
MELO3C006786.2 Cucumis melo HOM05D003621 ORTHO05D004259 1.6e-27 127.5 278 30.9
Lalb_Chr24g0397591 Lupinus albus HOM05D003621 ORTHO05D004259 1.6e-27 127.5 278 32.0
CAN.G1529.8 Capsicum annuum HOM05D003621 ORTHO05D004259 2.1e-27 127.1 278 30.6
ClCG05G007150 Citrullus lanatus HOM05D003621 ORTHO05D004259 2.1e-27 127.1 278 30.9
COL.COLO4_34873 Corchorus olitorius HOM05D003621 ORTHO05D004259 2.1e-27 127.1 278 31.3
Duzib168G1477 Durio zibethinus HOM05D003621 ORTHO05D004259 2.1e-27 127.1 278 32.4
Glyma.07G085800 Glycine max HOM05D003621 ORTHO05D004259 2.1e-27 127.1 278 32.7
PGSC0003DMG400000311 Solanum tuberosum HOM05D003621 ORTHO05D004259 2.1e-27 127.1 278 30.6
TAR624G1386 Trochodendron aralioides HOM05D003621 ORTHO05D004259 2.1e-27 127.1 277 31.8
Dinv36637 Davidia involucrata HOM05D003621 ORTHO05D004259 3.5e-27 126.3 278 30.9
TAR636G2961 Trochodendron aralioides HOM05D003621 ORTHO05D004259 3.5e-27 126.3 277 31.4
Migut.J01110 Erythranthe guttata HOM05D003621 ORTHO05D004259 4.6e-27 125.9 278 32.4
Migut.J01116 Erythranthe guttata HOM05D003621 ORTHO05D004259 4.6e-27 125.9 278 31.7
Migut.J01155 Erythranthe guttata HOM05D003621 ORTHO05D004259 4.6e-27 125.9 279 31.9
SalBow6G6039 Salvia bowleyana HOM05D003621 ORTHO05D004259 4.6e-27 125.9 276 34.1
Sed0008991 Sechium edule HOM05D003621 ORTHO05D004259 4.6e-27 125.9 278 31.3
Sopen12g003080 Solanum pennellii HOM05D003621 ORTHO05D004259 4.6e-27 125.9 278 30.6
MD15G1184200 Malus domestica HOM05D003621 ORTHO05D004259 6.0e-27 125.6 278 31.3
AL3G40070 Arabidopsis lyrata HOM05D003621 ORTHO05D004259 7.8e-27 125.2 275 31.6
AT3G24530 Arabidopsis thaliana HOM05D003621 ORTHO05D004259 7.8e-27 125.2 275 31.6
BcaC06g35719 Brassica carinata HOM05D003621 ORTHO05D004259 7.8e-27 125.2 275 31.3
A07p07780 Brassica napus HOM05D003621 ORTHO05D004259 7.8e-27 125.2 275 31.3
C07p11700 Brassica napus HOM05D003621 ORTHO05D004259 7.8e-27 125.2 275 31.3
BolC7t41643H Brassica oleracea HOM05D003621 ORTHO05D004259 7.8e-27 125.2 275 31.3
BraA07t28569Z Brassica rapa HOM05D003621 ORTHO05D004259 7.8e-27 125.2 275 31.3
Carub.0003s2492 Capsella rubella HOM05D003621 ORTHO05D004259 7.8e-27 125.2 275 31.6
Migut.J01111 Erythranthe guttata HOM05D003621 ORTHO05D004259 7.8e-27 125.2 274 32.8
Eucgr.C01036 Eucalyptus grandis HOM05D003621 ORTHO05D004259 7.8e-27 125.2 278 32.7
Thhalv10002506m.g Eutrema salsugineum HOM05D003621 ORTHO05D004259 7.8e-27 125.2 275 31.3
QL02p085200 Quercus lobata HOM05D003621 ORTHO05D004259 7.8e-27 125.2 277 31.0
Sp3g22320 Schrenkiella parvula HOM05D003621 ORTHO05D004259 7.8e-27 125.2 275 31.3
Lj7A651T32 Lonicera japonica HOM05D003621 ORTHO05D004259 1.0e-26 124.8 278 31.3
TPR.G25311 Trifolium pratense HOM05D003621 ORTHO05D004259 1.0e-26 124.8 277 32.1
Migut.J01119 Erythranthe guttata HOM05D003621 ORTHO05D004259 1.3e-26 124.4 278 32.7
GSVIVG01015385001 Vitis vinifera HOM05D003621 ORTHO05D004259 1.3e-26 124.4 277 30.7
arahy.Tifrunner.gnm1.ann1.EYQI1F Arachis hypogaea HOM05D003621 ORTHO05D004259 1.7e-26 124.0 278 30.9
arahy.Tifrunner.gnm1.ann1.VSCA53 Arachis hypogaea HOM05D003621 ORTHO05D004259 1.7e-26 124.0 278 30.9
BcaB06g26656 Brassica carinata HOM05D003621 ORTHO05D004259 1.7e-26 124.0 275 30.9
Cpa.g.sc23.101 Carica papaya HOM05D003621 ORTHO05D004259 1.7e-26 124.0 278 31.3
Duzib187G1605 Durio zibethinus HOM05D003621 ORTHO05D004259 1.7e-26 124.0 278 31.3
Migut.J01117 Erythranthe guttata HOM05D003621 ORTHO05D004259 1.7e-26 124.0 278 33.1
Aa31sc29G80 Aethionema arabicum HOM05D003621 ORTHO05D004259 2.3e-26 123.6 288 31.2
CiPaw.04G163500 Carya illinoinensis HOM05D003621 ORTHO05D004259 2.3e-26 123.6 278 30.9
ECA240G2782 Erigeron canadensis HOM05D003621 ORTHO05D004259 2.3e-26 123.6 278 30.6
Migut.J01113 Erythranthe guttata HOM05D003621 ORTHO05D004259 2.3e-26 123.6 278 32.4
Nn8g39169 Nelumbo nucifera HOM05D003621 ORTHO05D004259 2.3e-26 123.6 277 30.3
vmacro06217 Vaccinium macrocarpon HOM05D003621 ORTHO05D004259 2.3e-26 123.6 279 30.1
DCAR_028707 Daucus carota HOM05D003621 ORTHO05D004259 3.0e-26 123.2 247 33.2
HanXRQChr09g0239661 Helianthus annuus HOM05D003621 ORTHO05D004259 3.0e-26 123.2 279 30.5
Lsat_1_v5_gn_7_40780 Lactuca sativa HOM05D003621 ORTHO05D004259 3.0e-26 123.2 280 30.7
Sed0020967 Sechium edule HOM05D003621 ORTHO05D004259 3.0e-26 123.2 277 31.0
Ah.14g082090 Amaranthus hybridus HOM05D003621 ORTHO05D004259 3.9e-26 122.9 279 30.8
Psat1g042960 Pisum sativum HOM05D003621 ORTHO05D004259 3.9e-26 122.9 277 32.5
Thecc.09G109600 Theobroma cacao HOM05D003621 ORTHO05D004259 3.9e-26 122.9 278 31.7
AUR62021495 Chenopodium quinoa HOM05D003621 ORTHO05D004259 5.1e-26 122.5 279 30.5
Lj2g0018985 Lotus japonicus HOM05D003621 ORTHO05D004259 5.1e-26 122.5 277 30.7
Medtr6g088470 Medicago truncatula HOM05D003621 ORTHO05D004259 5.1e-26 122.5 277 31.8
Phvul.004G163800 Phaseolus vulgaris HOM05D003621 ORTHO05D004259 5.1e-26 122.5 278 32.0
SHI02763 Sapria himalayana HOM05D003621 ORTHO05D004259 5.1e-26 122.5 280 31.1
Zm00001eb204000 Zea mays HOM05D003621 ORTHO05D004259 5.1e-26 122.5 284 30.6
PSO782G0111 Papaver somniferum HOM05D003621 ORTHO05D004259 6.6e-26 122.1 277 31.0
Aa31sc99G150 Aethionema arabicum HOM05D003621 ORTHO05D004259 8.7e-26 121.7 275 30.9
Manes.03G021400 Manihot esculenta HOM05D003621 ORTHO05D004259 8.7e-26 121.7 278 31.3
PSO832G1684 Papaver somniferum HOM05D003621 ORTHO05D004259 8.7e-26 121.7 277 31.0
SEGI_35600 Sequoiadendron giganteum HOM05D003621 ORTHO05D004259 8.7e-26 121.7 278 31.3
TWI34G1138 Tripterygium wilfordii HOM05D003621 ORTHO05D004259 8.7e-26 121.7 285 30.5
CDE02G2554 Ceratophyllum demersum HOM05D003621 ORTHO05D004259 1.5e-25 120.9 277 30.0
Dinv41608 Davidia involucrata HOM05D003621 ORTHO05D004259 1.5e-25 120.9 278 30.2
Migut.J01104 Erythranthe guttata HOM05D003621 ORTHO05D004259 1.5e-25 120.9 272 32.0
SGA_v2.0_scaffold10G05155 Striga asiatica HOM05D003621 ORTHO05D004259 1.5e-25 120.9 282 31.6
TWI63G0694 Tripterygium wilfordii HOM05D003621 ORTHO05D004259 1.5e-25 120.9 277 30.3
Migut.J01147 Erythranthe guttata HOM05D003621 ORTHO05D004259 1.9e-25 120.6 278 32.0
MSTRG.19588 Avicennia marina HOM05D003621 ORTHO05D004259 2.5e-25 120.2 278 30.6
CARHR100670 Cardamine hirsuta HOM05D003621 ORTHO05D004259 2.5e-25 120.2 275 30.2
CDE08G0484 Ceratophyllum demersum HOM05D003621 ORTHO05D004259 2.5e-25 120.2 277 30.3
AUR62010986 Chenopodium quinoa HOM05D003621 ORTHO05D004259 2.5e-25 120.2 279 30.8
Aqoxy7G01646 Aquilegia oxysepala HOM05D003621 ORTHO05D004259 3.3e-25 119.8 293 30.7
Ca_03977_v3 Cicer arietinum L. HOM05D003621 ORTHO05D004259 3.3e-25 119.8 277 31.0
Migut.J01112 Erythranthe guttata HOM05D003621 ORTHO05D004259 3.3e-25 119.8 276 31.9
Nn2g11728 Nelumbo nucifera HOM05D003621 ORTHO05D004259 4.3e-25 119.4 279 30.1
Oeu064901.1 Olea europaea HOM05D003621 ORTHO05D004259 5.6e-25 119.0 277 31.4
VMungo0464G0841 Vigna mungo HOM05D003621 ORTHO05D004259 5.6e-25 119.0 278 30.6
CiPaw.03G231600 Carya illinoinensis HOM05D003621 ORTHO05D004259 7.3e-25 118.6 247 32.0
Migut.J01118 Erythranthe guttata HOM05D003621 ORTHO05D004259 7.3e-25 118.6 278 30.9
Sc08g0007530 Simmondsia chinensis HOM05D003621 ORTHO05D004259 7.3e-25 118.6 278 29.9
EL10Ac8g18488 Beta vulgaris HOM05D003621 ORTHO05D004259 9.6e-25 118.2 279 30.5
Cc06_g09720 Coffea canephora HOM05D003621 ORTHO05D004259 1.3e-24 117.9 247 31.6
unitig_22.g6628 Utricularia gibba HOM05D003621 ORTHO05D004259 1.3e-24 117.9 278 29.5
SalBow6G1987 Salvia bowleyana HOM05D003621 ORTHO05D004259 1.6e-24 117.5 283 31.4
THA.LOC104808764 Tarenaya hassleriana HOM05D003621 ORTHO05D004259 2.8e-24 116.7 275 30.2
SGA_v2.0_scaffold137G35130 Striga asiatica HOM05D003621 ORTHO05D004259 4.8e-24 115.9 288 29.5
SalBow6G3329 Salvia bowleyana HOM05D003621 ORTHO05D004259 1.1e-23 114.8 294 31.0
Potri.006G158600 Populus trichocarpa HOM05D003621 ORTHO05D004259 1.4e-23 114.4 278 30.2
Migut.J01103 Erythranthe guttata HOM05D003621 ORTHO05D004259 3.1e-23 113.2 272 31.6
Sabra18G0068200 Salix brachista HOM05D003621 ORTHO05D004259 3.1e-23 113.2 278 29.1
SalBow6G4876 Salvia bowleyana HOM05D003621 ORTHO05D004259 4.0e-23 112.8 220 34.5
Solyc07g023990.3 Solanum lycopersicum HOM05D003621 ORTHO05D004259 4.0e-23 112.8 274 28.5
Potri.018G081000 Populus trichocarpa HOM05D003621 ORTHO05D004259 1.5e-22 110.9 278 28.8
HPP92_005264 Vanilla planifolia HOM05D003621 ORTHO05D004259 2.0e-22 110.5 268 29.9
Nitab4.5_0004562g0010 Nicotiana tabacum HOM05D003621 ORTHO05D004259 2.6e-22 110.2 262 29.0
SalBow6G4774 Salvia bowleyana HOM05D003621 ORTHO05D004259 2.9e-21 106.7 275 31.6
Aqoxy7G01648 Aquilegia oxysepala HOM05D003621 ORTHO05D004259 4.2e-20 102.8 250 29.2
vmacro10501 Vaccinium macrocarpon HOM05D003621 ORTHO05D004259 4.2e-20 102.8 279 27.6
SalBow6G3888 Salvia bowleyana HOM05D003621 ORTHO05D004259 9.3e-20 101.7 210 34.3
SMO367G0606 Selaginella moellendorffii HOM05D003621 ORTHO05D004259 3.5e-19 99.8 245 29.8
Aqoxy7G01647 Aquilegia oxysepala HOM05D003621 ORTHO05D004259 1.9e-17 94.0 273 28.6
Actinidia24746 Actinidia chinensis HOM05D006672 ORTHO05D007769 2.1e-16 90.5 64 65.6
Actinidia32682 Actinidia chinensis HOM05D003621 ORTHO05D004259 1.8e-15 87.4 242 30.2
Hma1.2p1_0001F.1_g001560 Hydrangea macrophylla HOM05D003621 ORTHO05D004259 1.7e-13 80.9 134 32.8
Nn8g39167 Nelumbo nucifera HOM05D003621 ORTHO05D004259 9.3e-12 75.1 254 26.0
HanXRQChr16g0522441 Helianthus annuus HOM05D003621 ORTHO05D004259 1.8e-10 70.9 110 33.6
Oeu023080.1 Olea europaea HOM05D003621 ORTHO05D004259 2.3e-10 70.5 85 41.2
Aqoxy3G01597 Aquilegia oxysepala HOM05D003621 ORTHO05D004259 3.0e-10 70.1 110 33.6
Nn8g39160 Nelumbo nucifera HOM05D003621 ORTHO05D004259 2.5e-09 67.0 113 37.2
AagrBONN_evm.TU.Sc2ySwM_368.1977 Anthoceros agrestis HOM05D003621 ORTHO05D004259 9.6e-09 65.1 85 40.0
Nn8g39165 Nelumbo nucifera HOM05D003621 ORTHO05D004259 6.2e-08 62.4 137 29.2
Cre04.g219000 Chlamydomonas reinhardtii HOM05D003621 ORTHO05D010935 1.8e-07 60.8 178 26.4
MCO01G086 Micromonas commoda HOM05D003621 ORTHO05D004259 2.4e-07 60.5 204 27.0
Cre04.g218900 Chlamydomonas reinhardtii HOM05D003621 ORTHO05D010935 4.0e-07 59.7 178 26.4


User provided reference genes

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