Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.2233 Avicennia marina HOM05D007757 ORTHO05D009619 7.9e-64 246.9 120 100.0
Migut.E00343 Erythranthe guttata HOM05D007757 ORTHO05D009619 2.3e-15 85.9 118 47.5
SGA_v2.0_scaffold36G14535 Striga asiatica HOM05D007757 ORTHO05D009619 4.0e-15 85.1 72 48.6
Actinidia16654 Actinidia chinensis HOM05D007757 ORTHO05D009619 3.4e-14 82.0 116 43.1
Actinidia14892 Actinidia chinensis HOM05D007757 ORTHO05D009619 4.8e-13 78.2 92 42.4
Peaxi162Scf00382g00086 Petunia axillaris HOM05D007757 ORTHO05D009619 3.1e-12 75.5 123 39.0
CAN.G610.82 Capsicum annuum HOM05D007757 ORTHO05D009619 1.6e-11 73.2 106 37.7
DCAR_030156 Daucus carota HOM05D007757 ORTHO05D009619 2.0e-11 72.8 70 50.0
Cc11_g10120 Coffea canephora HOM05D007757 ORTHO05D009619 2.7e-11 72.4 124 37.9
Peaxi162Scf00382g00073 Petunia axillaris HOM05D007757 ORTHO05D009619 4.5e-11 71.6 123 39.8
Solyc05g009340.1 Solanum lycopersicum HOM05D007757 ORTHO05D009619 7.7e-11 70.9 115 39.1
Gohir.D01G175600 Gossypium hirsutum HOM05D007757 ORTHO05D009619 1.7e-10 69.7 98 36.7
MD13G1041700 Malus domestica HOM05D007757 ORTHO05D009619 2.3e-10 69.3 58 48.3
PGSC0003DMG400014580 Solanum tuberosum HOM05D007757 ORTHO05D009619 2.9e-10 68.9 126 37.3
Gorai.002G217900 Gossypium raimondii HOM05D007757 ORTHO05D009619 3.8e-10 68.6 98 35.7
THA.LOC104800008 Tarenaya hassleriana HOM05D007757 ORTHO05D009619 1.1e-09 67.0 47 57.4
Thecc.02G230200 Theobroma cacao HOM05D007757 ORTHO05D009619 1.1e-09 67.0 89 39.3
Sopen05g005100 Solanum pennellii HOM05D007757 ORTHO05D009619 1.5e-09 66.6 124 35.5
Duzib248G1397 Durio zibethinus HOM05D007757 ORTHO05D009619 1.9e-09 66.2 103 38.8
Nitab4.5_0000791g0090 Nicotiana tabacum HOM05D007757 ORTHO05D009619 2.5e-09 65.9 120 36.7
Gorai.012G123000 Gossypium raimondii HOM05D007757 ORTHO05D009619 5.5e-09 64.7 105 36.2
Gohir.D04G138100 Gossypium hirsutum HOM05D007757 ORTHO05D009619 7.2e-09 64.3 105 36.2
Manes.06G067700 Manihot esculenta HOM05D007757 ORTHO05D009619 9.5e-09 63.9 102 39.2
Potri.010G124700 Populus trichocarpa HOM05D007757 ORTHO05D009619 1.2e-08 63.5 102 34.3
Sc11g0003440 Simmondsia chinensis HOM05D007757 ORTHO05D009619 1.2e-08 63.5 106 37.7
TWI75G0183 Tripterygium wilfordii HOM05D007757 ORTHO05D009619 1.6e-08 63.2 97 33.0
Sabra10G0094600 Salix brachista HOM05D007757 ORTHO05D009619 2.1e-08 62.8 126 36.5
CARHR061280 Cardamine hirsuta HOM05D007757 ORTHO05D009619 2.8e-08 62.4 43 55.8
Sp5g23570 Schrenkiella parvula HOM05D007757 ORTHO05D009619 3.6e-08 62.0 53 50.9
BcaB05g24389 Brassica carinata HOM05D007757 ORTHO05D009619 6.1e-08 61.2 53 50.9
BraA02t06576Z Brassica rapa HOM05D007757 ORTHO05D009619 6.1e-08 61.2 53 50.9
THA.LOC104821934 Tarenaya hassleriana HOM05D007757 ORTHO05D009619 6.1e-08 61.2 128 35.2
BcaC03g14960 Brassica carinata HOM05D007757 ORTHO05D009619 8.0e-08 60.8 53 50.9
C02p24780 Brassica napus HOM05D007757 ORTHO05D009619 8.0e-08 60.8 53 50.9
BolC2t08570H Brassica oleracea HOM05D007757 ORTHO05D009619 8.0e-08 60.8 53 50.9
Haze_17487 Corylus avellana HOM05D007757 ORTHO05D009619 8.0e-08 60.8 103 37.9
Thhalv10019384m.g Eutrema salsugineum HOM05D007757 ORTHO05D009619 8.0e-08 60.8 43 55.8
TPR.G1503 Trifolium pratense HOM05D007757 ORTHO05D009619 1.4e-07 60.1 52 46.2
BcaB03g15824 Brassica carinata HOM05D007757 ORTHO05D009619 1.8e-07 59.7 74 41.9
BcaC08g46271 Brassica carinata HOM05D007757 ORTHO05D009619 1.8e-07 59.7 74 41.9
Rhsim09G0107900 Rhododendron simsii HOM05D007757 ORTHO05D009619 1.8e-07 59.7 113 37.2
A07p34900 Brassica napus HOM05D007757 ORTHO05D009619 2.3e-07 59.3 78 39.7
C06p41430 Brassica napus HOM05D007757 ORTHO05D009619 2.3e-07 59.3 78 39.7
BolC6t39280H Brassica oleracea HOM05D007757 ORTHO05D009619 2.3e-07 59.3 78 39.7
A02p15100 Brassica napus HOM05D007757 ORTHO05D009619 3.0e-07 58.9 53 49.1
Cpa.g.sc1.36 Carica papaya HOM05D007757 ORTHO05D009619 3.0e-07 58.9 83 42.2
CiPaw.15G085600 Carya illinoinensis HOM05D007757 ORTHO05D009619 4.0e-07 58.5 101 34.7
RcHm_v2.0_Chr4g0435141 Rosa chinensis HOM05D007757 ORTHO05D009619 4.0e-07 58.5 48 54.2
MD16G1042600 Malus domestica HOM05D007757 ORTHO05D009619 5.2e-07 58.2 51 47.1
COL.COLO4_37757 Corchorus olitorius HOM05D007757 ORTHO05D009619 6.8e-07 57.8 119 31.9
AT1G68500 Arabidopsis thaliana HOM05D007757 ORTHO05D009619 2.0e-06 56.2 44 47.7
Carub.0002s1501 Capsella rubella HOM05D007757 ORTHO05D009619 2.6e-06 55.8 55 43.6
AL2G27370 Arabidopsis lyrata HOM05D007757 ORTHO05D009619 3.4e-06 55.5 43 48.8
Glyma.10G274100 Glycine max HOM05D007757 ORTHO05D009619 3.4e-06 55.5 48 50.0
Glyma.20G115900 Glycine max HOM05D007757 ORTHO05D009619 3.4e-06 55.5 48 50.0
Medtr1g110790 Medicago truncatula HOM05D007757 ORTHO05D009619 3.4e-06 55.5 71 39.4
Psat6g227960 Pisum sativum HOM05D007757 ORTHO05D009619 3.4e-06 55.5 60 41.7
CANSAT01G0578 Cannabis sativa HOM05D007757 ORTHO05D009619 4.4e-06 55.1 50 50.0
Phvul.007G027400 Phaseolus vulgaris HOM05D007757 ORTHO05D009619 4.4e-06 55.1 49 46.9
Prupe.1G311500 Prunus persica HOM05D007757 ORTHO05D009619 4.4e-06 55.1 113 35.4
Lalb_Chr02g0145961 Lupinus albus HOM05D007757 ORTHO05D009619 7.5e-06 54.3 112 33.9


User provided reference genes

Program Settings