Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.22273 Avicennia marina HOM05D004348 ORTHO05D006191 5.8e-178 627.5 327 100.0
SGA_v2.0_scaffold226G43137 Striga asiatica HOM05D004348 ORTHO05D006191 2.4e-123 446.0 315 72.4
Migut.N02696 Erythranthe guttata HOM05D004348 ORTHO05D006191 4.5e-122 441.8 309 71.8
Oeu057258.1 Olea europaea HOM05D004348 ORTHO05D006191 2.5e-120 436.0 316 70.3
Oeu003300.1 Olea europaea HOM05D004348 ORTHO05D006191 5.2e-118 428.3 316 68.0
Cc10_g04460 Coffea canephora HOM05D004348 ORTHO05D006191 2.1e-106 389.8 315 61.9
Nitab4.5_0005301g0040 Nicotiana tabacum HOM05D004348 ORTHO05D006191 1.2e-103 380.6 315 62.2
PGSC0003DMG400007988 Solanum tuberosum HOM05D004348 ORTHO05D006191 2.1e-103 379.8 314 61.8
Nitab4.5_0000068g0550 Nicotiana tabacum HOM05D004348 ORTHO05D006191 4.7e-103 378.6 315 61.9
Lj4A53T53 Lonicera japonica HOM05D004348 ORTHO05D006191 1.5e-101 373.6 315 61.0
Solyc04g079280.4 Solanum lycopersicum HOM05D004348 ORTHO05D006191 3.4e-101 372.5 314 60.5
Sopen04g032870 Solanum pennellii HOM05D004348 ORTHO05D006191 3.4e-101 372.5 314 60.8
Dinv35980 Davidia involucrata HOM05D004348 ORTHO05D006191 2.9e-100 369.4 322 60.9
Dinv39334 Davidia involucrata HOM05D004348 ORTHO05D006191 2.4e-99 366.3 314 62.4
CAN.G371.44 Capsicum annuum HOM05D004348 ORTHO05D006191 2.1e-98 363.2 314 59.6
Hma1.2p1_0337F.1_g129300 Hydrangea macrophylla HOM05D004348 ORTHO05D006191 2.1e-98 363.2 320 58.4
QL02p005708 Quercus lobata HOM05D004348 ORTHO05D006191 1.0e-97 360.9 315 60.6
Cfa018516 Carpinus fangiana HOM05D004348 ORTHO05D006191 1.3e-97 360.5 315 57.8
Atru.chr13.637 Acer truncatum HOM05D004348 ORTHO05D006191 1.7e-97 360.1 315 59.7
TAR625G1112 Trochodendron aralioides HOM05D004348 ORTHO05D006191 3.9e-97 359.0 315 58.4
Thecc.08G012500 Theobroma cacao HOM05D004348 ORTHO05D006191 8.6e-97 357.8 315 59.0
Atru.chr1.1668 Acer truncatum HOM05D004348 ORTHO05D006191 7.3e-96 354.8 315 58.4
Ciclev10000175m.g Citrus clementina HOM05D004348 ORTHO05D006191 7.3e-96 354.8 315 58.1
PGR031G2748 Punica granatum HOM05D004348 ORTHO05D006191 7.3e-96 354.8 316 57.3
Peaxi162Scf00528g00825 Petunia axillaris HOM05D004348 ORTHO05D006191 1.2e-95 354.0 293 62.8
unitig_26.g10059 Utricularia gibba HOM05D004348 ORTHO05D006191 1.6e-95 353.6 310 61.6
Sed0015301 Sechium edule HOM05D004348 ORTHO05D006191 4.7e-95 352.1 316 59.2
COL.COLO4_26463 Corchorus olitorius HOM05D004348 ORTHO05D006191 8.1e-95 351.3 309 59.2
Rhsim06G0047100 Rhododendron simsii HOM05D004348 ORTHO05D006191 1.4e-94 350.5 315 57.8
CsaV3_4G034150 Cucumis sativus L. HOM05D004348 ORTHO05D006191 1.8e-94 350.1 314 58.6
Manes.05G171200 Manihot esculenta HOM05D004348 ORTHO05D006191 1.8e-94 350.1 314 57.0
Potri.014G034100 Populus trichocarpa HOM05D004348 ORTHO05D006191 6.8e-94 348.2 315 57.5
FAN27G3414 Fragaria x ananassa HOM05D004348 ORTHO05D006191 1.5e-93 347.1 313 57.5
Duzib093G0393 Durio zibethinus HOM05D004348 ORTHO05D006191 2.0e-93 346.7 315 56.8
GSVIVG01009553001 Vitis vinifera HOM05D004348 ORTHO05D006191 2.0e-93 346.7 314 57.6
MD08G1105600 Malus domestica HOM05D004348 ORTHO05D006191 2.6e-93 346.3 316 57.3
vmacro21553 Vaccinium macrocarpon HOM05D004348 ORTHO05D006191 2.6e-93 346.3 315 56.5
Sabra14G0024200 Salix brachista HOM05D004348 ORTHO05D006191 3.4e-93 345.9 315 57.5
RcHm_v2.0_Chr6g0307221 Rosa chinensis HOM05D004348 ORTHO05D006191 9.9e-93 344.4 313 57.5
Gohir.D01G106800 Gossypium hirsutum HOM05D004348 ORTHO05D006191 1.3e-92 344.0 315 57.1
FvH4_2g34840 Fragaria vesca HOM05D004348 ORTHO05D006191 1.7e-92 343.6 313 57.2
MD15G1086600 Malus domestica HOM05D004348 ORTHO05D006191 2.2e-92 343.2 315 56.8
Lj5g0025546 Lotus japonicus HOM05D004348 ORTHO05D006191 3.8e-92 342.4 320 56.2
MBI06_g27707_MAGBIO Magnolia biondii HOM05D004348 ORTHO05D006191 6.4e-92 341.7 318 54.7
Prupe.1G440200 Prunus persica HOM05D004348 ORTHO05D006191 6.4e-92 341.7 316 57.0
Gorai.002G131100 Gossypium raimondii HOM05D004348 ORTHO05D006191 1.1e-91 340.9 316 57.3
CSS0012651 Camellia sinensis var. sinensis HOM05D004348 ORTHO05D006191 1.9e-91 340.1 315 56.8
AUR62039313 Chenopodium quinoa HOM05D004348 ORTHO05D006191 3.2e-91 339.3 315 57.5
EL10Ac1g01783 Beta vulgaris HOM05D004348 ORTHO05D006191 4.2e-91 339.0 315 57.1
DCAR_020931 Daucus carota HOM05D004348 ORTHO05D006191 4.2e-91 339.0 313 55.0
Gohir.A01G118500 Gossypium hirsutum HOM05D004348 ORTHO05D006191 4.2e-91 339.0 316 56.6
ECA247G1923 Erigeron canadensis HOM05D004348 ORTHO05D006191 5.4e-91 338.6 315 58.1
MELO3C016737.2 Cucumis melo HOM05D004348 ORTHO05D006191 7.1e-91 338.2 314 57.3
Hund26625 Selenicereus undatus HOM05D004348 ORTHO05D006191 7.1e-91 338.2 316 57.3
FAN15G1136 Fragaria x ananassa HOM05D004348 ORTHO05D006191 1.2e-90 337.4 315 56.2
Sc02g0006980 Simmondsia chinensis HOM05D004348 ORTHO05D006191 4.6e-90 335.5 313 56.9
Carub.0007s0605 Capsella rubella HOM05D004348 ORTHO05D006191 1.3e-89 334.0 320 53.8
CiPaw.16G046500 Carya illinoinensis HOM05D004348 ORTHO05D006191 1.7e-89 333.6 315 54.0
Phvul.001G020000 Phaseolus vulgaris HOM05D004348 ORTHO05D006191 1.7e-89 333.6 314 53.8
Sed0012719 Sechium edule HOM05D004348 ORTHO05D006191 2.3e-89 333.2 314 56.1
AT4G34310 Arabidopsis thaliana HOM05D004348 ORTHO05D006191 6.6e-89 331.6 320 53.4
AL7G16960 Arabidopsis lyrata HOM05D004348 ORTHO05D006191 8.7e-89 331.3 320 53.8
CARHR242470 Cardamine hirsuta HOM05D004348 ORTHO05D006191 1.9e-88 330.1 321 53.9
AUR62022445 Chenopodium quinoa HOM05D004348 ORTHO05D006191 1.9e-88 330.1 306 56.9
Sp7g32110 Schrenkiella parvula HOM05D004348 ORTHO05D006191 9.6e-88 327.8 323 53.6
Thhalv10024246m.g Eutrema salsugineum HOM05D004348 ORTHO05D006191 1.3e-87 327.4 323 53.6
Glyma.14G081100 Glycine max HOM05D004348 ORTHO05D006191 1.6e-87 327.0 314 54.1
A01p04110 Brassica napus HOM05D004348 ORTHO05D006191 2.1e-87 326.6 316 53.8
Cpa.g.c24415.13 Carica papaya HOM05D004348 ORTHO05D006191 2.1e-87 326.6 314 53.2
Aqoxy5G01277 Aquilegia oxysepala HOM05D004348 ORTHO05D006191 2.8e-87 326.2 321 53.9
BraA01t00399Z Brassica rapa HOM05D004348 ORTHO05D006191 2.8e-87 326.2 316 53.8
HanXRQChr02g0038751 Helianthus annuus HOM05D004348 ORTHO05D006191 2.8e-87 326.2 310 56.1
THA.LOC104806947 Tarenaya hassleriana HOM05D004348 ORTHO05D006191 2.8e-87 326.2 311 54.0
Lalb_Chr24g0399211 Lupinus albus HOM05D004348 ORTHO05D006191 8.1e-87 324.7 311 54.0
ClCG05G019730 Citrullus lanatus HOM05D004348 ORTHO05D006191 1.4e-86 323.9 308 57.1
Aa31LG2G16180 Aethionema arabicum HOM05D004348 ORTHO05D006191 2.4e-86 323.2 323 52.3
arahy.Tifrunner.gnm1.ann1.2EEB7P Arachis hypogaea HOM05D004348 ORTHO05D006191 5.3e-86 322.0 320 53.8
arahy.Tifrunner.gnm1.ann1.3D95JG Arachis hypogaea HOM05D004348 ORTHO05D006191 5.3e-86 322.0 320 53.8
SHI08301 Sapria himalayana HOM05D004348 ORTHO05D006191 5.3e-86 322.0 319 56.7
Glyma.17G244300 Glycine max HOM05D004348 ORTHO05D006191 6.9e-86 321.6 314 52.5
C01p04470 Brassica napus HOM05D004348 ORTHO05D006191 9.0e-86 321.2 317 53.9
BolC1t00433H Brassica oleracea HOM05D004348 ORTHO05D006191 3.4e-85 319.3 317 53.6
VMungo0647G0261 Vigna mungo HOM05D004348 ORTHO05D006191 9.9e-85 317.8 314 52.2
PSO675G6987 Papaver somniferum HOM05D004348 ORTHO05D006191 6.4e-84 315.1 315 53.3
Eucgr.F02367 Eucalyptus grandis HOM05D004348 ORTHO05D006191 1.4e-83 313.9 315 53.0
Ca_13305_v3 Cicer arietinum L. HOM05D004348 ORTHO05D006191 4.2e-83 312.4 311 52.4
TPR.G13698 Trifolium pratense HOM05D004348 ORTHO05D006191 4.6e-82 308.9 306 52.9
ECA232G4920 Erigeron canadensis HOM05D004348 ORTHO05D006191 3.3e-80 302.8 311 54.3
Medtr1g019960 Medicago truncatula HOM05D004348 ORTHO05D006191 9.6e-80 301.2 311 51.8
Lsat_1_v5_gn_4_124060 Lactuca sativa HOM05D004348 ORTHO05D006191 1.3e-79 300.8 265 58.9
CANSAT78G0057 Cannabis sativa HOM05D004348 ORTHO05D006191 2.1e-79 300.1 315 53.0
Psat6g012000 Pisum sativum HOM05D004348 ORTHO05D006191 3.6e-79 299.3 326 49.4
Nn5g30212 Nelumbo nucifera HOM05D004348 ORTHO05D006191 1.4e-78 297.4 323 51.1
ATR1159G040 Amborella trichopoda HOM05D004348 ORTHO05D006191 5.3e-78 295.4 328 47.6
HPP92_019297 Vanilla planifolia HOM05D004348 ORTHO05D006191 1.5e-77 293.9 319 52.0
HanXRQChr16g0507461 Helianthus annuus HOM05D004348 ORTHO05D006191 1.1e-75 287.7 312 52.2
CDE10G0798 Ceratophyllum demersum HOM05D004348 ORTHO05D006191 3.0e-73 279.6 315 45.1
Zm00001eb006390 Zea mays HOM05D004348 ORTHO05D006191 9.3e-67 258.1 318 45.6
Actinidia15256 Actinidia chinensis HOM05D004348 ORTHO05D006191 7.4e-64 248.4 220 58.6
SEGI_03031 Sequoiadendron giganteum HOM05D004348 ORTHO05D006191 3.7e-63 246.1 243 51.9
Lsat_1_v5_gn_8_33681 Lactuca sativa HOM05D004348 ORTHO05D006191 2.0e-61 240.4 224 56.7
Lsat_1_v5_gn_2_12981 Lactuca sativa HOM05D004348 ORTHO05D006191 6.1e-58 228.8 208 59.6
Potri.002G128201 Populus trichocarpa HOM05D004348 ORTHO05D006191 1.3e-57 227.6 197 58.9
Lsat_1_v5_gn_1_21400 Lactuca sativa HOM05D004348 ORTHO05D006191 2.3e-57 226.9 207 59.4
Lsat_1_v5_gn_1_42721 Lactuca sativa HOM05D004348 ORTHO05D006191 2.3e-57 226.9 207 59.4
Lsat_1_v5_gn_3_76560 Lactuca sativa HOM05D004348 ORTHO05D006191 2.3e-57 226.9 207 59.4
Lsat_1_v5_gn_4_501 Lactuca sativa HOM05D004348 ORTHO05D006191 2.3e-57 226.9 207 59.4
Lsat_1_v5_gn_9_17721 Lactuca sativa HOM05D004348 ORTHO05D006191 2.3e-57 226.9 207 59.4
CDE10G0919 Ceratophyllum demersum HOM05D004348 ORTHO05D006191 1.6e-55 220.7 271 43.5
Mapoly0033s0109 Marchantia polymorpha HOM05D004348 ORTHO05D006191 1.4e-46 191.0 320 38.1
SMO144G0009 Selaginella moellendorffii HOM05D004348 ORTHO05D006191 3.3e-40 169.9 307 33.2
AagrBONN_evm.TU.Sc2ySwM_344.1636 Anthoceros agrestis HOM05D004348 ORTHO05D006191 9.1e-38 161.8 247 38.5
Pp3c17_5660 Physcomitrium patens HOM05D004348 ORTHO05D006191 1.3e-23 114.8 182 34.6
CBR_g45541 Chara braunii HOM05D004348 ORTHO05D006191 3.8e-12 76.6 255 25.5
Lsat_1_v5_gn_9_67901 Lactuca sativa HOM05D004348 ORTHO05D006191 8.6e-12 75.5 72 58.3


User provided reference genes

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