Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.22076 Avicennia marina HOM05D006245 ORTHO05D007260 1.1e-170 603.2 312 100.0
MSTRG.24524 Avicennia marina HOM05D006245 ORTHO05D007260 2.1e-92 343.2 312 63.8
Migut.N02994 Erythranthe guttata HOM05D006245 ORTHO05D007260 3.6e-92 342.4 313 62.6
Migut.O00838 Erythranthe guttata HOM05D006245 ORTHO05D007260 3.1e-88 329.3 310 61.9
SalBow6G6430 Salvia bowleyana HOM05D006245 ORTHO05D007260 4.5e-87 325.5 309 64.1
SGA_v2.0_scaffold220G42616 Striga asiatica HOM05D006245 ORTHO05D007260 6.6e-70 268.5 316 55.4
Actinidia15551 Actinidia chinensis HOM05D006245 ORTHO05D007260 1.2e-55 221.1 319 48.0
Dinv05508 Davidia involucrata HOM05D006245 ORTHO05D007260 3.5e-55 219.5 320 46.6
Rhsim06G0001900 Rhododendron simsii HOM05D006245 ORTHO05D007260 1.7e-49 200.7 331 44.1
unitig_8.g4814 Utricularia gibba HOM05D006245 ORTHO05D007260 1.4e-48 197.6 303 47.2
vmacro21743 Vaccinium macrocarpon HOM05D006245 ORTHO05D007260 7.1e-48 195.3 333 44.1
PGSC0003DMG400010008 Solanum tuberosum HOM05D006245 ORTHO05D007260 1.2e-47 194.5 290 47.9
Sopen04g036530 Solanum pennellii HOM05D006245 ORTHO05D007260 2.3e-46 190.3 297 44.4
unitig_578.g16243 Utricularia gibba HOM05D006245 ORTHO05D007260 3.9e-46 189.5 300 45.3
CAN.G1330.24 Capsicum annuum HOM05D006245 ORTHO05D007260 8.6e-46 188.3 288 45.8
Solyc04g082890.3 Solanum lycopersicum HOM05D006245 ORTHO05D007260 2.1e-44 183.7 289 44.3
CiPaw.07G131600 Carya illinoinensis HOM05D006245 ORTHO05D007260 2.4e-43 180.3 297 43.1
PGR083G2384 Punica granatum HOM05D006245 ORTHO05D007260 6.9e-43 178.7 297 43.8
Ciclev10002005m.g Citrus clementina HOM05D006245 ORTHO05D007260 8.9e-43 178.3 312 42.6
TWI56G0455 Tripterygium wilfordii HOM05D006245 ORTHO05D007260 1.9e-40 170.6 299 42.1
Cpa.g.sc438.4 Carica papaya HOM05D006245 ORTHO05D007260 2.4e-40 170.2 316 42.1
QL02p016022 Quercus lobata HOM05D006245 ORTHO05D007260 1.2e-39 167.9 309 42.1
Gohir.D05G292800 Gossypium hirsutum HOM05D006245 ORTHO05D007260 4.6e-39 166.0 310 41.9
Gorai.009G309200 Gossypium raimondii HOM05D006245 ORTHO05D007260 6.0e-39 165.6 310 41.9
Gohir.A05G291700 Gossypium hirsutum HOM05D006245 ORTHO05D007260 1.0e-38 164.9 312 42.3
Lsat_1_v5_gn_2_3181 Lactuca sativa HOM05D006245 ORTHO05D007260 1.7e-38 164.1 299 44.1
Cc10_g00180 Coffea canephora HOM05D006245 ORTHO05D007260 2.3e-38 163.7 202 53.0
Cpa.g.c24967.6 Carica papaya HOM05D006245 ORTHO05D007260 3.0e-38 163.3 302 43.4
DCAR_017622 Daucus carota HOM05D006245 ORTHO05D007260 5.1e-38 162.5 263 46.4
Sc02g0009330 Simmondsia chinensis HOM05D006245 ORTHO05D007260 8.7e-38 161.8 311 39.5
Oeu042496.1 Olea europaea HOM05D006245 ORTHO05D007260 1.1e-37 161.4 246 47.2
Manes.18G001000 Manihot esculenta HOM05D006245 ORTHO05D007260 1.5e-37 161.0 305 39.0
GSVIVG01013443001 Vitis vinifera HOM05D006245 ORTHO05D007260 1.5e-37 161.0 161 56.5
TAR381G0633 Trochodendron aralioides HOM05D006245 ORTHO05D007260 5.6e-37 159.1 277 45.8
Manes.18G005000 Manihot esculenta HOM05D006245 ORTHO05D007260 9.6e-37 158.3 299 40.1
Nn6g31596 Nelumbo nucifera HOM05D006245 ORTHO05D007260 3.6e-36 156.4 276 43.1
Thecc.08G098200 Theobroma cacao HOM05D006245 ORTHO05D007260 1.8e-35 154.1 291 40.9
Eucgr.F03612 Eucalyptus grandis HOM05D006245 ORTHO05D007260 3.4e-34 149.8 150 56.7
Haze_22875 Corylus avellana HOM05D006245 ORTHO05D007260 7.6e-34 148.7 297 40.1
MBI04_g42540_MAGBIO Magnolia biondii HOM05D006245 ORTHO05D007260 1.7e-33 147.5 304 37.2
DCAR_009857 Daucus carota HOM05D006245 ORTHO05D007260 4.9e-33 146.0 154 53.9
ECA248G0813 Erigeron canadensis HOM05D004589 ORTHO05D005848 6.4e-33 145.6 174 51.1
Cfa014151 Carpinus fangiana HOM05D006245 ORTHO05D007260 8.4e-33 145.2 149 57.0
CsaV3_4G037700 Cucumis sativus L. HOM05D006245 ORTHO05D007260 2.4e-32 143.7 318 37.7
ClCG11G019110 Citrullus lanatus HOM05D006245 ORTHO05D007260 2.1e-31 140.6 298 38.9
Hund01813 Selenicereus undatus HOM05D006245 ORTHO05D007260 3.5e-31 139.8 336 36.3
MELO3C017064.2 Cucumis melo HOM05D006245 ORTHO05D007260 1.3e-30 137.9 300 38.3
EL10Ac1g01844 Beta vulgaris HOM05D006245 ORTHO05D007260 2.3e-30 137.1 314 38.2
CSS0018800 Camellia sinensis var. sinensis HOM05D006245 ORTHO05D007260 2.3e-30 137.1 235 43.0
COL.COLO4_03408 Corchorus olitorius HOM05D006245 ORTHO05D007260 2.3e-30 137.1 302 38.4
Atru.chr13.34 Acer truncatum HOM05D006245 ORTHO05D007260 3.0e-30 136.7 310 37.1
Lalb_Chr19g0129191 Lupinus albus HOM05D006245 ORTHO05D007260 6.7e-30 135.6 304 37.5
PGR031G1027 Punica granatum HOM05D006245 ORTHO05D007260 6.7e-30 135.6 293 38.9
Potri.005G257900 Populus trichocarpa HOM05D006245 ORTHO05D007260 8.7e-30 135.2 309 35.9
TWI36G0521 Tripterygium wilfordii HOM05D006245 ORTHO05D007260 1.1e-29 134.8 150 55.3
Lj5g0002209 Lotus japonicus HOM05D006245 ORTHO05D007260 1.9e-29 134.0 185 47.0
Aqoxy6G03039 Aquilegia oxysepala HOM05D006245 ORTHO05D007260 2.5e-29 133.7 169 53.3
Psat6g093400 Pisum sativum HOM05D006245 ORTHO05D007260 2.5e-29 133.7 292 37.0
Eucgr.F01824 Eucalyptus grandis HOM05D006245 ORTHO05D007260 1.3e-28 131.3 294 39.1
Phvul.007G247600 Phaseolus vulgaris HOM05D006245 ORTHO05D007260 2.1e-28 130.6 297 37.0
Peaxi162Scf00385g00068 Petunia axillaris HOM05D006245 ORTHO05D007260 4.8e-28 129.4 187 50.8
Glyma.02G161100 Glycine max HOM05D006245 ORTHO05D007260 6.2e-28 129.0 297 37.7
BcaC07g37450 Brassica carinata HOM05D006245 ORTHO05D007260 8.1e-28 128.6 241 42.3
A08p07630 Brassica napus HOM05D006245 ORTHO05D007260 8.1e-28 128.6 213 45.5
C08p09220 Brassica napus HOM05D006245 ORTHO05D007260 8.1e-28 128.6 241 42.3
BolC8t47771H Brassica oleracea HOM05D006245 ORTHO05D007260 8.1e-28 128.6 241 42.3
BraA08t32777Z Brassica rapa HOM05D006245 ORTHO05D007260 8.1e-28 128.6 213 45.5
CANSAT11G2487 Cannabis sativa HOM05D006245 ORTHO05D007260 1.1e-27 128.3 295 38.3
MD06G1002100 Malus domestica HOM05D006245 ORTHO05D007260 1.1e-27 128.3 172 50.0
Prupe.5G003000 Prunus persica HOM05D006245 ORTHO05D007260 1.8e-27 127.5 324 36.7
Gohir.D04G005900 Gossypium hirsutum HOM05D006245 ORTHO05D007260 3.1e-27 126.7 253 39.1
Sed0007375 Sechium edule HOM05D006245 ORTHO05D007260 3.1e-27 126.7 305 39.7
Gorai.012G007100 Gossypium raimondii HOM05D006245 ORTHO05D007260 4.0e-27 126.3 253 39.1
CiPaw.08G078200 Carya illinoinensis HOM05D006245 ORTHO05D007260 9.0e-27 125.2 296 34.1
Aa31LG6G10010 Aethionema arabicum HOM05D006245 ORTHO05D007260 2.0e-26 124.0 327 36.4
FAN04G2011 Fragaria x ananassa HOM05D006245 ORTHO05D007260 2.0e-26 124.0 312 35.9
BcaB04g17767 Brassica carinata HOM05D006245 ORTHO05D007260 2.6e-26 123.6 246 43.1
arahy.Tifrunner.gnm1.ann1.ZHJ1I0 Arachis hypogaea HOM05D006245 ORTHO05D007260 3.4e-26 123.2 201 43.3
FAN08G3087 Fragaria x ananassa HOM05D006245 ORTHO05D007260 3.4e-26 123.2 315 35.6
FAN18G3272 Fragaria x ananassa HOM05D006245 ORTHO05D007260 5.8e-26 122.5 163 49.7
FvH4_5g26440 Fragaria vesca HOM05D006245 ORTHO05D007260 7.6e-26 122.1 163 49.1
FAN13G0213 Fragaria x ananassa HOM05D006245 ORTHO05D007260 7.6e-26 122.1 163 49.1
arahy.Tifrunner.gnm1.ann1.9KRV5K Arachis hypogaea HOM05D006245 ORTHO05D007260 1.7e-25 120.9 230 40.0
RcHm_v2.0_Chr7g0217321 Rosa chinensis HOM05D006245 ORTHO05D007260 1.7e-25 120.9 231 42.0
HanXRQChr14g0427941 Helianthus annuus HOM05D006245 ORTHO05D007260 2.9e-25 120.2 253 39.9
Medtr1g050502 Medicago truncatula HOM05D006245 ORTHO05D007260 2.9e-25 120.2 252 38.5
CARHR035240 Cardamine hirsuta HOM05D006245 ORTHO05D007260 3.8e-25 119.8 273 38.5
Thhalv10004635m.g Eutrema salsugineum HOM05D006245 ORTHO05D007260 3.8e-25 119.8 321 37.7
Nitab4.5_0000464g0100 Nicotiana tabacum HOM05D006245 ORTHO05D007260 1.1e-24 118.2 295 36.3
PSO541G3542 Papaver somniferum HOM05D006245 ORTHO05D007260 9.3e-24 115.2 330 35.5
Sp1g32200 Schrenkiella parvula HOM05D006245 ORTHO05D007260 1.6e-23 114.4 313 35.8
TPR.G10624 Trifolium pratense HOM05D006245 ORTHO05D007260 3.5e-23 113.2 238 37.4
PSO675G9277 Papaver somniferum HOM05D006245 ORTHO05D007260 1.0e-22 111.7 269 37.9
Duzib114G1035 Durio zibethinus HOM05D006245 ORTHO05D007260 3.0e-22 110.2 209 35.9
AUR62035186 Chenopodium quinoa HOM05D006245 ORTHO05D007260 1.5e-21 107.8 260 39.2
HPP92_003836 Vanilla planifolia HOM05D006245 ORTHO05D007260 9.6e-21 105.1 308 34.1
Ah.11g042230 Amaranthus hybridus HOM05D006245 ORTHO05D007260 2.1e-20 104.0 93 63.4
AUR62041341 Chenopodium quinoa HOM05D006245 ORTHO05D007260 2.1e-20 104.0 238 39.9
Carub.0001s3439 Capsella rubella HOM05D006245 ORTHO05D007260 3.7e-20 103.2 159 45.3
VMungo0720G1847 Vigna mungo HOM05D006245 ORTHO05D007260 3.7e-20 103.2 121 54.5
AL1G51480 Arabidopsis lyrata HOM05D006245 ORTHO05D007260 6.2e-20 102.4 306 35.3
Gohir.A05G409532 Gossypium hirsutum HOM05D006245 ORTHO05D007260 1.1e-19 101.7 144 45.8
CDE05G2672 Ceratophyllum demersum HOM05D006245 ORTHO05D007260 1.4e-19 101.3 271 37.6
ATR0605G375 Amborella trichopoda HOM05D006245 ORTHO05D007260 2.4e-19 100.5 221 39.8
Duzib106G1614 Durio zibethinus HOM05D006245 ORTHO05D007260 2.4e-19 100.5 81 64.2
Eucgr.L02193 Eucalyptus grandis HOM05D006245 ORTHO05D007260 2.4e-19 100.5 203 43.8
Actinidia17088 Actinidia chinensis HOM05D001218 ORTHO05D004088 1.5e-18 97.8 88 63.6
Ca_26636_v3 Cicer arietinum L. HOM05D006245 ORTHO05D007260 2.0e-18 97.4 127 51.2
Os06g0622700 Oryza sativa ssp. japonica HOM05D006245 ORTHO05D007260 1.0e-17 95.1 181 40.3
THA.LOC104813184 Tarenaya hassleriana HOM05D006245 ORTHO05D007260 1.0e-17 95.1 322 31.4
Eucgr.G02751 Eucalyptus grandis HOM05D006245 ORTHO05D007260 2.2e-17 94.0 101 57.4
Sabra05G0199800 Salix brachista HOM05D006245 ORTHO05D007260 4.9e-17 92.8 223 35.4
AT1G42990 Arabidopsis thaliana HOM05D006245 ORTHO05D007260 1.4e-16 91.3 290 33.8
Zm00001eb388050 Zea mays HOM05D006245 ORTHO05D007260 7.1e-16 89.0 205 38.5
Eucgr.F02193 Eucalyptus grandis HOM05D006245 ORTHO05D007260 3.5e-15 86.7 99 56.6
Gorai.006G220700 Gossypium raimondii HOM05D006245 ORTHO05D007260 2.5e-13 80.5 66 63.6
Gorai.004G097700 Gossypium raimondii HOM05D006245 ORTHO05D007260 9.0e-11 72.0 193 35.8
AUR62043321 Chenopodium quinoa HOM05D006245 ORTHO05D007260 7.6e-10 68.9 74 51.4
Gohir.D08G092150 Gossypium hirsutum HOM05D006245 ORTHO05D007260 2.9e-09 67.0 77 53.2
ECA234G2998 Erigeron canadensis HOM05D006245 ORTHO05D007260 6.5e-09 65.9 186 36.6
AUR62033078 Chenopodium quinoa HOM05D000408 ORTHO05D001664 7.9e-07 58.9 51 64.7


User provided reference genes

Program Settings