Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.22037 Avicennia marina HOM05D003922 ORTHO05D004492 2.8e-82 308.5 154 100.0
MSTRG.24564 Avicennia marina HOM05D003922 ORTHO05D004492 1.5e-67 259.6 150 84.7
Migut.N03060 Erythranthe guttata HOM05D003922 ORTHO05D004492 9.1e-65 250.4 150 82.7
SGA_v2.0_scaffold25G11004 Striga asiatica HOM05D003922 ORTHO05D004492 2.9e-63 245.4 150 82.0
Oeu050329.1 Olea europaea HOM05D003922 ORTHO05D004492 2.8e-61 238.8 150 78.0
SGA_v2.0_scaffold19G08849 Striga asiatica HOM05D003922 ORTHO05D004492 2.8e-61 238.8 161 75.8
Dinv18325 Davidia involucrata HOM05D003922 ORTHO05D004492 3.0e-60 235.3 150 78.0
unitig_578.g16270 Utricularia gibba HOM05D003922 ORTHO05D004492 1.7e-58 229.6 148 75.7
SalBow6G3114 Salvia bowleyana HOM05D003922 ORTHO05D004492 1.1e-57 226.9 149 76.5
PGR142G3702 Punica granatum HOM05D003922 ORTHO05D004492 2.0e-56 222.6 150 72.7
Cc03_g14390 Coffea canephora HOM05D003922 ORTHO05D004492 2.7e-56 222.2 150 73.3
Lj6A217G7 Lonicera japonica HOM05D003922 ORTHO05D004492 2.7e-56 222.2 150 72.0
TAR633G0046 Trochodendron aralioides HOM05D003922 ORTHO05D004492 4.6e-56 221.5 149 71.8
Rhsim09G0008700 Rhododendron simsii HOM05D003922 ORTHO05D004492 7.8e-56 220.7 150 72.0
Solyc08g014300.4 Solanum lycopersicum HOM05D003922 ORTHO05D004492 1.0e-55 220.3 153 68.6
vmacro00688 Vaccinium macrocarpon HOM05D003922 ORTHO05D004492 1.0e-55 220.3 150 72.7
GSVIVG01035132001 Vitis vinifera HOM05D003922 ORTHO05D004492 1.0e-55 220.3 150 70.7
Manes.05G137000 Manihot esculenta HOM05D003922 ORTHO05D004492 2.3e-55 219.2 150 71.3
CSS0049854 Camellia sinensis var. sinensis HOM05D003922 ORTHO05D004492 2.9e-55 218.8 150 70.7
Sopen06g018570 Solanum pennellii HOM05D003922 ORTHO05D004492 2.9e-55 218.8 150 72.0
Sopen08g005210 Solanum pennellii HOM05D003922 ORTHO05D004492 3.9e-55 218.4 150 69.3
Actinidia27120 Actinidia chinensis HOM05D003922 ORTHO05D004492 5.0e-55 218.0 150 72.7
PGSC0003DMG400016330 Solanum tuberosum HOM05D003922 ORTHO05D004492 5.0e-55 218.0 150 71.3
CSS0038398 Camellia sinensis var. sinensis HOM05D003922 ORTHO05D004492 8.6e-55 217.2 150 69.3
PGSC0003DMG400016054 Solanum tuberosum HOM05D003922 ORTHO05D004492 1.1e-54 216.9 150 69.3
Eucgr.H00289 Eucalyptus grandis HOM05D003922 ORTHO05D004492 2.5e-54 215.7 150 69.3
CSS0002835 Camellia sinensis var. sinensis HOM05D003922 ORTHO05D004492 4.3e-54 214.9 150 68.7
DCAR_005455 Daucus carota HOM05D003922 ORTHO05D004492 4.3e-54 214.9 150 70.7
EL10Ac3g06102 Beta vulgaris HOM05D003922 ORTHO05D004492 7.3e-54 214.2 149 67.8
Nn2g13969 Nelumbo nucifera HOM05D003922 ORTHO05D004492 7.3e-54 214.2 148 68.2
Hund03208 Selenicereus undatus HOM05D003922 ORTHO05D004492 7.3e-54 214.2 147 70.7
Aqoxy2G04156 Aquilegia oxysepala HOM05D003922 ORTHO05D004492 2.8e-53 212.2 151 66.9
TWI63G0384 Tripterygium wilfordii HOM05D003922 ORTHO05D004492 4.7e-53 211.5 150 68.0
HanXRQChr11g0343091 Helianthus annuus HOM05D003922 ORTHO05D004492 1.8e-52 209.5 148 68.9
Ciclev10022699m.g Citrus clementina HOM05D003922 ORTHO05D004492 3.1e-52 208.8 150 66.7
Potri.013G127400 Populus trichocarpa HOM05D003922 ORTHO05D004492 3.1e-52 208.8 148 67.6
Cfa015673 Carpinus fangiana HOM05D003922 ORTHO05D004492 4.0e-52 208.4 150 67.3
Peaxi162Scf00075g01329 Petunia axillaris HOM05D003922 ORTHO05D004492 5.2e-52 208.0 150 70.7
CiPaw.01G168800 Carya illinoinensis HOM05D003922 ORTHO05D004492 8.9e-52 207.2 152 67.1
Gohir.A09G213608 Gossypium hirsutum HOM05D003922 ORTHO05D004492 8.9e-52 207.2 147 67.3
Gohir.D09G212300 Gossypium hirsutum HOM05D003922 ORTHO05D004492 8.9e-52 207.2 147 67.3
Gorai.006G232100 Gossypium raimondii HOM05D003922 ORTHO05D004492 8.9e-52 207.2 147 67.3
Duzib268G1060 Durio zibethinus HOM05D003922 ORTHO05D004492 1.2e-51 206.8 150 66.7
Oeu015712.2 Olea europaea HOM05D003922 ORTHO05D004492 1.2e-51 206.8 222 52.3
Thecc.04G164400 Theobroma cacao HOM05D003922 ORTHO05D004492 1.5e-51 206.5 147 68.0
Sed0023559 Sechium edule HOM05D003922 ORTHO05D004492 2.6e-51 205.7 150 66.0
CAN.G1401.2 Capsicum annuum HOM05D003922 ORTHO05D004492 3.4e-51 205.3 147 66.7
CAN.G759.3 Capsicum annuum HOM05D003922 ORTHO05D004492 3.4e-51 205.3 150 66.0
CANSAT56G1338 Cannabis sativa HOM05D003922 ORTHO05D004492 4.4e-51 204.9 146 66.4
ECA248G0756 Erigeron canadensis HOM05D003922 ORTHO05D004492 5.8e-51 204.5 147 67.3
Lsat_1_v5_gn_1_74581 Lactuca sativa HOM05D003922 ORTHO05D004492 7.5e-51 204.1 147 66.7
Sabra13G0106500 Salix brachista HOM05D003922 ORTHO05D004492 7.5e-51 204.1 148 66.9
Cpa.g.sc9.377 Carica papaya HOM05D003922 ORTHO05D004492 9.8e-51 203.8 150 66.0
ClCG11G013550 Citrullus lanatus HOM05D003922 ORTHO05D004492 1.3e-50 203.4 150 66.7
MELO3C011855.2 Cucumis melo HOM05D003922 ORTHO05D004492 1.7e-50 203.0 147 67.3
CsaV3_5G030170 Cucumis sativus L. HOM05D003922 ORTHO05D004492 2.2e-50 202.6 150 66.7
QL10p056544 Quercus lobata HOM05D003922 ORTHO05D004492 3.7e-50 201.8 149 65.1
Os11g0256200 Oryza sativa ssp. japonica HOM05D003922 ORTHO05D004492 4.9e-50 201.4 147 65.3
Sc19g0002260 Simmondsia chinensis HOM05D003922 ORTHO05D004492 8.3e-50 200.7 150 66.0
Thhalv10009017m.g Eutrema salsugineum HOM05D003922 ORTHO05D004492 1.1e-49 200.3 150 62.7
RcHm_v2.0_Chr4g0405841 Rosa chinensis HOM05D003922 ORTHO05D004492 1.1e-49 200.3 150 64.7
Nitab4.5_0004700g0050 Nicotiana tabacum HOM05D003922 ORTHO05D004492 1.9e-49 199.5 170 61.2
PSO573G0028 Papaver somniferum HOM05D003922 ORTHO05D004492 3.2e-49 198.7 146 63.0
AT1G05730 Arabidopsis thaliana HOM05D003922 ORTHO05D004492 5.4e-49 198.0 150 62.7
THA.LOC104800922 Tarenaya hassleriana HOM05D003922 ORTHO05D004492 5.4e-49 198.0 150 63.3
TPR.G16707 Trifolium pratense HOM05D003922 ORTHO05D004492 7.0e-49 197.6 149 64.4
AL1G15640 Arabidopsis lyrata HOM05D003922 ORTHO05D004492 1.2e-48 196.8 150 62.0
BcaC07g42112 Brassica carinata HOM05D003922 ORTHO05D004492 1.2e-48 196.8 150 62.0
THA.LOC104815872 Tarenaya hassleriana HOM05D003922 ORTHO05D004492 1.2e-48 196.8 147 64.6
Prupe.1G185700 Prunus persica HOM05D003922 ORTHO05D004492 1.6e-48 196.4 147 65.3
Atru.chr4.1453 Acer truncatum HOM05D003922 ORTHO05D004492 2.0e-48 196.1 150 62.7
CARHR005250 Cardamine hirsuta HOM05D003922 ORTHO05D004492 2.7e-48 195.7 149 61.7
PSO017G0931 Papaver somniferum HOM05D003922 ORTHO05D004492 2.7e-48 195.7 146 63.0
CDE09G1276 Ceratophyllum demersum HOM05D003922 ORTHO05D004492 3.5e-48 195.3 147 61.2
MD04G1037100 Malus domestica HOM05D003922 ORTHO05D004492 6.0e-48 194.5 147 64.6
A09p67310 Brassica napus HOM05D003922 ORTHO05D004492 7.8e-48 194.1 150 60.7
arahy.Tifrunner.gnm1.ann1.D9AT9V Arachis hypogaea HOM05D003922 ORTHO05D004492 1.3e-47 193.4 149 61.7
Sp4g14200 Schrenkiella parvula HOM05D003922 ORTHO05D004492 1.7e-47 193.0 150 61.3
Aa31LG5G5270 Aethionema arabicum HOM05D003922 ORTHO05D004492 2.3e-47 192.6 150 60.0
AUR62002412 Chenopodium quinoa HOM05D003922 ORTHO05D004492 2.3e-47 192.6 147 63.3
Ca_14117_v3 Cicer arietinum L. HOM05D003922 ORTHO05D004492 2.3e-47 192.6 149 62.4
Glyma.06G319900 Glycine max HOM05D003922 ORTHO05D004492 2.3e-47 192.6 149 62.4
Sp1g04550 Schrenkiella parvula HOM05D003922 ORTHO05D004492 2.3e-47 192.6 150 60.0
FAN21G3935 Fragaria x ananassa HOM05D003922 ORTHO05D004492 3.0e-47 192.2 143 64.3
DCAR_027517 Daucus carota HOM05D003922 ORTHO05D004492 3.9e-47 191.8 151 60.9
FvH4_3g34590 Fragaria vesca HOM05D003922 ORTHO05D004492 3.9e-47 191.8 143 64.3
FAN11G1624 Fragaria x ananassa HOM05D003922 ORTHO05D004492 3.9e-47 191.8 143 64.3
FAN25G1394 Fragaria x ananassa HOM05D003922 ORTHO05D004492 3.9e-47 191.8 143 64.3
AL4G26980 Arabidopsis lyrata HOM05D003922 ORTHO05D004492 5.0e-47 191.4 150 60.0
FAN02G1921 Fragaria x ananassa HOM05D003922 ORTHO05D004492 5.0e-47 191.4 145 63.4
FAN06G3125 Fragaria x ananassa HOM05D003922 ORTHO05D004492 5.0e-47 191.4 145 63.4
ATR0743G180 Amborella trichopoda HOM05D003922 ORTHO05D004492 6.6e-47 191.0 140 63.6
AT2G31725 Arabidopsis thaliana HOM05D003922 ORTHO05D004492 6.6e-47 191.0 150 60.0
Thhalv10017374m.g Eutrema salsugineum HOM05D003922 ORTHO05D004492 6.6e-47 191.0 150 60.7
C04p18050 Brassica napus HOM05D003922 ORTHO05D004492 8.6e-47 190.7 150 60.0
BolC4t23353H Brassica oleracea HOM05D003922 ORTHO05D004492 8.6e-47 190.7 150 60.0
Medtr3g009130 Medicago truncatula HOM05D003922 ORTHO05D004492 8.6e-47 190.7 149 61.7
Phvul.005G007000 Phaseolus vulgaris HOM05D003922 ORTHO05D004492 8.6e-47 190.7 149 63.8
BcaB02g10413 Brassica carinata HOM05D003922 ORTHO05D004492 1.1e-46 190.3 150 60.0
FAN16G1833 Fragaria x ananassa HOM05D003922 ORTHO05D004492 1.1e-46 190.3 143 63.6
Psat5g230680 Pisum sativum HOM05D003922 ORTHO05D004492 1.1e-46 190.3 149 62.4
Glyma.02G058200 Glycine max HOM05D003922 ORTHO05D004492 1.5e-46 189.9 149 61.7
BcaC02g11282 Brassica carinata HOM05D003922 ORTHO05D004492 1.9e-46 189.5 150 60.0
Lalb_Chr18g0048821 Lupinus albus HOM05D003922 ORTHO05D004492 1.9e-46 189.5 149 59.7
BraA09t42062Z Brassica rapa HOM05D003922 ORTHO05D004492 9.5e-46 187.2 157 58.0
Lj3g0023756 Lotus japonicus HOM05D003922 ORTHO05D004492 1.2e-45 186.8 149 59.7
Peaxi162Scf00579g00013 Petunia axillaris HOM05D003922 ORTHO05D004492 1.6e-45 186.4 147 65.3
Glyma.04G117900 Glycine max HOM05D003922 ORTHO05D004492 3.6e-45 185.3 149 60.4
THA.LOC104804105 Tarenaya hassleriana HOM05D003922 ORTHO05D004492 3.6e-45 185.3 152 60.5
Carub.0004s1303 Capsella rubella HOM05D003922 ORTHO05D004492 1.1e-44 183.7 147 59.2
CARHR125410 Cardamine hirsuta HOM05D003922 ORTHO05D004492 1.1e-44 183.7 147 57.1
BolC8t52690H Brassica oleracea HOM05D003922 ORTHO05D004492 1.8e-44 183.0 160 55.6
Lj6A207G21 Lonicera japonica HOM05D003922 ORTHO05D004492 1.8e-44 183.0 193 52.8
BraA05t20315Z Brassica rapa HOM05D003922 ORTHO05D004492 5.2e-44 181.4 162 55.6
Carub.0001s0508 Capsella rubella HOM05D003922 ORTHO05D004492 5.2e-44 181.4 150 57.3
C08p51620 Brassica napus HOM05D003922 ORTHO05D004492 1.5e-43 179.9 161 55.3
Zm00001eb169120 Zea mays HOM05D003922 ORTHO05D004492 9.8e-43 177.2 139 58.3
Duzib151G1155 Durio zibethinus HOM05D003922 ORTHO05D004492 1.3e-42 176.8 181 50.8
COL.COLO4_38113 Corchorus olitorius HOM05D003922 ORTHO05D004492 1.7e-42 176.4 135 63.7
VMungo1080G1004 Vigna mungo HOM05D003922 ORTHO05D004492 1.7e-42 176.4 149 58.4
Zm00001eb169100 Zea mays HOM05D003922 ORTHO05D004492 1.7e-42 176.4 139 59.7
Sp4g25790 Schrenkiella parvula HOM05D003922 ORTHO05D004492 2.2e-42 176.0 144 59.7
CiPaw.02G099200 Carya illinoinensis HOM05D003922 ORTHO05D004492 3.7e-42 175.3 143 60.8
BcaC02g07156 Brassica carinata HOM05D000941 ORTHO05D004492 4.9e-42 174.9 154 55.8
AL4G42550 Arabidopsis lyrata HOM05D003922 ORTHO05D004492 8.3e-42 174.1 144 56.9
AT2G43720 Arabidopsis thaliana HOM05D003922 ORTHO05D004492 8.3e-42 174.1 144 57.6
BolC4t28571H Brassica oleracea HOM05D003922 ORTHO05D004492 8.3e-42 174.1 150 56.7
CARHR138910 Cardamine hirsuta HOM05D003922 ORTHO05D004492 1.1e-41 173.7 144 57.6
A04p33020 Brassica napus HOM05D003922 ORTHO05D004492 5.4e-41 171.4 143 58.0
C04p70710 Brassica napus HOM05D003922 ORTHO05D004492 5.4e-41 171.4 143 58.0
BraA04t18761Z Brassica rapa HOM05D003922 ORTHO05D004492 5.4e-41 171.4 143 58.0
HPP92_023724 Vanilla planifolia HOM05D003922 ORTHO05D004492 1.6e-40 169.9 147 57.8
BcaB06g29344 Brassica carinata HOM05D003922 ORTHO05D004492 1.0e-39 167.2 143 56.6
Carub.0004s2626 Capsella rubella HOM05D003922 ORTHO05D004492 1.3e-39 166.8 144 55.6
Thhalv10001669m.g Eutrema salsugineum HOM05D003922 ORTHO05D004492 3.0e-39 165.6 143 56.6
arahy.Tifrunner.gnm1.ann1.1Q5EFH Arachis hypogaea HOM05D003922 ORTHO05D004492 3.6e-37 158.7 149 53.7
MBI07_g11491_MAGBIO Magnolia biondii HOM05D003922 ORTHO05D004492 4.0e-36 155.2 142 55.6
Solyc06g053490.4 Solanum lycopersicum HOM05D003922 ORTHO05D004492 5.8e-35 151.4 89 79.8
CDE04G0234 Ceratophyllum demersum HOM05D003922 ORTHO05D004492 9.9e-35 150.6 89 76.4
Glyma.06G288100 Glycine max HOM05D003922 ORTHO05D004492 1.7e-34 149.8 128 60.2
Glyma.06G288300 Glycine max HOM05D003922 ORTHO05D004492 1.7e-34 149.8 128 60.2
arahy.Tifrunner.gnm1.ann1.H4TYTD Arachis hypogaea HOM05D003922 ORTHO05D004492 2.2e-34 149.4 149 52.3
Lj3P164T1 Lonicera japonica HOM05D003922 ORTHO05D004492 1.6e-32 143.3 108 63.0
Lju359P1T4 Lonicera japonica HOM05D003922 ORTHO05D004492 1.6e-32 143.3 108 63.0
Haze_00850 Corylus avellana HOM05D003922 ORTHO05D004492 4.6e-32 141.7 89 70.8
BcaC07g42117 Brassica carinata HOM05D003922 ORTHO05D004492 1.7e-31 139.8 151 51.0
Nitab4.5_0007474g0040 Nicotiana tabacum HOM05D003922 ORTHO05D004492 1.7e-31 139.8 133 55.6
Nitab4.5_0000013g0490 Nicotiana tabacum HOM05D003922 ORTHO05D004492 3.0e-31 139.0 89 74.2
Haze_00864 Corylus avellana HOM05D003922 ORTHO05D004492 4.3e-30 135.2 89 68.5
BcaC07g42114 Brassica carinata HOM05D003922 ORTHO05D004492 6.2e-29 131.3 122 50.8
A05p13780 Brassica napus HOM05D003922 ORTHO05D004492 5.8e-27 124.8 153 43.8
Glyma.06G320000 Glycine max HOM05D003922 ORTHO05D004492 5.8e-27 124.8 145 45.5
Aa31LG1G25440 Aethionema arabicum HOM05D003922 ORTHO05D004492 3.8e-26 122.1 106 56.6
arahy.Tifrunner.gnm1.ann1.GG9VXM Arachis hypogaea HOM05D003922 ORTHO05D004492 3.8e-26 122.1 149 47.0
Glyma.06G288000 Glycine max HOM05D003922 ORTHO05D004492 2.1e-24 116.3 144 42.4
SEGI_40113 Sequoiadendron giganteum HOM05D003922 ORTHO05D004492 3.0e-23 112.5 86 55.8
Psat3g002600 Pisum sativum HOM05D003321 ORTHO05D004492 5.1e-23 111.7 82 61.0
Pp3c22_16840 Physcomitrium patens HOM05D003922 ORTHO05D004492 4.3e-22 108.6 139 40.3
AagrBONN_evm.TU.Sc2ySwM_228.3693 Anthoceros agrestis HOM05D003922 ORTHO05D004492 1.3e-21 107.1 138 34.8
Carub.0001s0509 Capsella rubella HOM05D003922 ORTHO05D004492 2.9e-18 95.9 86 50.0
AT1G05740 Arabidopsis thaliana HOM05D003922 ORTHO05D004492 4.9e-18 95.1 103 44.7
SMO174G0123 Selaginella moellendorffii HOM05D003922 ORTHO05D004492 7.9e-16 87.8 138 29.0
Glyma.06G288200 Glycine max HOM05D003922 ORTHO05D004492 5.1e-15 85.1 144 36.1
SMO174G0129 Selaginella moellendorffii HOM05D003922 ORTHO05D004492 1.6e-13 80.1 141 28.4
arahy.Tifrunner.gnm1.ann1.V6LTI0 Arachis hypogaea HOM05D003922 ORTHO05D004492 8.1e-13 77.8 71 54.9
SMO116G0121 Selaginella moellendorffii HOM05D003922 ORTHO05D004492 1.8e-12 76.6 104 33.7
arahy.Tifrunner.gnm1.ann1.DMY77W Arachis hypogaea HOM05D003922 ORTHO05D004492 1.5e-11 73.6 91 42.9
BcaB05g24674 Brassica carinata HOM05D001689 ORTHO05D004492 1.5e-11 73.6 52 61.5
Mapoly0006s0297 Marchantia polymorpha HOM05D003922 ORTHO05D004492 2.2e-10 69.7 129 28.7
CBR_g3774 Chara braunii HOM05D003922 ORTHO05D004492 2.9e-10 69.3 131 26.0
Lsat_1_v5_gn_3_36701 Lactuca sativa HOM05D003922 ORTHO05D004492 3.8e-10 68.9 101 37.6
CiPaw.16G066500 Carya illinoinensis HOM05D003922 ORTHO05D004492 1.4e-09 67.0 85 48.2
BcaB05g25136 Brassica carinata HOM05D003922 ORTHO05D004492 1.6e-08 63.5 44 59.1
AUR62023777 Chenopodium quinoa HOM05D003922 ORTHO05D004492 3.5e-08 62.4 46 60.9


User provided reference genes

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