Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.21993 Avicennia marina HOM05D004311 ORTHO05D005145 2.3e-108 395.6 201 100.0
MSTRG.20570 Avicennia marina HOM05D004311 ORTHO05D005145 2.2e-18 96.7 191 41.4
SalBow3G3821 Salvia bowleyana HOM05D004311 ORTHO05D005145 1.3e-15 87.4 202 34.2
Oeu050349.1 Olea europaea HOM05D004311 ORTHO05D005145 9.0e-12 74.7 124 45.2
Migut.N03111 Erythranthe guttata HOM05D004311 ORTHO05D005145 1.3e-10 70.9 168 37.5
Rhsim09G0031800 Rhododendron simsii HOM05D004311 ORTHO05D005145 3.8e-10 69.3 144 36.8
CSS0021437 Camellia sinensis var. sinensis HOM05D004311 ORTHO05D005145 7.1e-09 65.1 187 34.2
Nitab4.5_0004962g0030 Nicotiana tabacum HOM05D004311 ORTHO05D005145 9.3e-09 64.7 150 34.7
Oeu007717.1 Olea europaea HOM05D004311 ORTHO05D005145 1.2e-08 64.3 128 43.8
SGA_v2.0_scaffold12G06156 Striga asiatica HOM05D004311 ORTHO05D005145 1.2e-08 64.3 94 48.9
Sc19g0002150 Simmondsia chinensis HOM05D004311 ORTHO05D005145 1.6e-08 63.9 136 37.5
vmacro00590 Vaccinium macrocarpon HOM05D004311 ORTHO05D005145 1.6e-08 63.9 154 35.7
CANSAT01G2758 Cannabis sativa HOM05D004311 ORTHO05D005145 4.6e-08 62.4 159 33.3
CANSAT78G0609 Cannabis sativa HOM05D004311 ORTHO05D005145 6.0e-08 62.0 215 29.8
Nitab4.5_0001049g0080 Nicotiana tabacum HOM05D004311 ORTHO05D005145 2.3e-07 60.1 143 35.0
PGSC0003DMG400021611 Solanum tuberosum HOM05D004311 ORTHO05D005145 5.1e-07 58.9 170 32.9
Nitab4.5_0006710g0020 Nicotiana tabacum HOM05D004311 ORTHO05D005145 6.7e-07 58.5 161 33.5
Solyc09g098560.2 Solanum lycopersicum HOM05D004311 ORTHO05D005145 8.7e-07 58.2 154 33.8
Sopen09g036480 Solanum pennellii HOM05D004311 ORTHO05D005145 8.7e-07 58.2 152 34.2
QL10p045440 Quercus lobata HOM05D004311 ORTHO05D005145 1.1e-06 57.8 120 39.2
Actinidia35905 Actinidia chinensis HOM05D004311 ORTHO05D005145 2.5e-06 56.6 155 34.2
Lj6A60T47 Lonicera japonica HOM05D004311 ORTHO05D005145 3.3e-06 56.2 159 33.3
Haze_00714 Corylus avellana HOM05D004311 ORTHO05D005145 4.3e-06 55.8 127 38.6
SalBow6G5966 Salvia bowleyana HOM05D004311 ORTHO05D005145 5.6e-06 55.5 164 35.4


User provided reference genes

Program Settings