Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.21902 Avicennia marina HOM05D000186 ORTHO05D001124 1.5e-50 202.6 104 100.0
Migut.B00008 Erythranthe guttata HOM05D000186 ORTHO05D001124 5.9e-15 84.3 62 64.5
unitig_32.g11010 Utricularia gibba HOM05D000186 ORTHO05D001124 1.2e-12 76.6 61 60.7
Hma1.2p1_0271F.1_g108830 Hydrangea macrophylla HOM05D000186 ORTHO05D001124 1.4e-11 73.2 64 56.2
Hma1.2p1_2860F.1_g329535 Hydrangea macrophylla HOM05D000186 ORTHO05D001124 1.4e-11 73.2 64 56.2
Hma1.2p1_2860F.1_g329540 Hydrangea macrophylla HOM05D000186 ORTHO05D001124 1.4e-11 73.2 64 56.2
Rhsim11G0197600 Rhododendron simsii HOM05D000186 ORTHO05D001124 2.3e-11 72.4 109 43.1
SalBow1G3794 Salvia bowleyana HOM05D000186 ORTHO05D001124 3.0e-11 72.0 56 64.3
CAN.G1725.5 Capsicum annuum HOM05D000186 ORTHO05D001124 8.8e-11 70.5 54 59.3
Nitab4.5_0000783g0160 Nicotiana tabacum HOM05D000186 ORTHO05D001124 2.0e-10 69.3 60 48.3
Nitab4.5_0010389g0030 Nicotiana tabacum HOM05D000186 ORTHO05D001124 2.0e-10 69.3 60 53.3
Actinidia20572 Actinidia chinensis HOM05D000186 ORTHO05D001124 2.5e-10 68.9 54 59.3
PGSC0003DMG400014677 Solanum tuberosum HOM05D000186 ORTHO05D001124 2.5e-10 68.9 53 58.5
Solyc01g112210.3 Solanum lycopersicum HOM05D000186 ORTHO05D001124 4.3e-10 68.2 54 57.4
Sopen01g054260 Solanum pennellii HOM05D000186 ORTHO05D001124 4.3e-10 68.2 54 57.4
Actinidia17998 Actinidia chinensis HOM05D000186 ORTHO05D001124 7.4e-10 67.4 63 54.0
SGA_v2.0_scaffold66G22263 Striga asiatica HOM05D000186 ORTHO05D001124 1.7e-09 66.2 46 63.0
vmacro03443 Vaccinium macrocarpon HOM05D000186 ORTHO05D001124 2.2e-09 65.9 54 59.3
CiPaw.06G116100 Carya illinoinensis HOM05D000186 ORTHO05D001124 6.3e-09 64.3 63 52.4
Lsat_1_v5_gn_3_48740 Lactuca sativa HOM05D000186 ORTHO05D001124 6.3e-09 64.3 65 46.2
HanXRQChr17g0543971 Helianthus annuus HOM05D000186 ORTHO05D001124 1.1e-08 63.5 64 46.9
ECA246G4815 Erigeron canadensis HOM05D000186 ORTHO05D001124 1.4e-08 63.2 49 59.2
Peaxi162Scf00362g00150 Petunia axillaris HOM05D000186 ORTHO05D001124 1.4e-08 63.2 81 44.4
GSVIVG01023883001 Vitis vinifera HOM05D000186 ORTHO05D001124 1.4e-08 63.2 74 45.9
EL10Ac9g21240 Beta vulgaris HOM05D000186 ORTHO05D001124 3.1e-08 62.0 48 58.3
Hund27031 Selenicereus undatus HOM05D000186 ORTHO05D001124 4.1e-08 61.6 57 56.1
QL11p056082 Quercus lobata HOM05D000186 ORTHO05D001124 1.2e-07 60.1 49 55.1
TAR376G1080 Trochodendron aralioides HOM05D000186 ORTHO05D001124 1.2e-07 60.1 63 46.0
AUR62012914 Chenopodium quinoa HOM05D000186 ORTHO05D001124 1.5e-07 59.7 57 52.6
Lj9A406G58 Lonicera japonica HOM05D000186 ORTHO05D001124 1.5e-07 59.7 44 59.1
MBI08_g37571_MAGBIO Magnolia biondii HOM05D000186 ORTHO05D001124 2.0e-07 59.3 43 55.8
MBI08_g43049_MAGBIO Magnolia biondii HOM05D000186 ORTHO05D001124 2.0e-07 59.3 43 55.8
Cc09_g10770 Coffea canephora HOM05D000186 ORTHO05D001124 2.6e-07 58.9 85 37.6
vmacro03393 Vaccinium macrocarpon HOM05D000186 ORTHO05D001124 3.4e-07 58.5 89 40.4
Aqoxy6G01637 Aquilegia oxysepala HOM05D000186 ORTHO05D001124 4.5e-07 58.2 40 60.0
DCAR_006283 Daucus carota HOM05D000186 ORTHO05D001124 4.5e-07 58.2 74 43.2
LjContig00272g0024746 Lotus japonicus HOM05D000186 ORTHO05D001124 4.5e-07 58.2 57 49.1
TAR628G1353 Trochodendron aralioides HOM05D000186 ORTHO05D001124 5.9e-07 57.8 65 44.6
AUR62011716 Chenopodium quinoa HOM05D000186 ORTHO05D001124 1.0e-06 57.0 39 61.5
QL11p056028 Quercus lobata HOM05D000186 ORTHO05D001124 1.3e-06 56.6 49 51.0
Phvul.009G115700 Phaseolus vulgaris HOM05D000186 ORTHO05D001124 1.7e-06 56.2 59 45.8
PSO541G2723 Papaver somniferum HOM05D000186 ORTHO05D001124 2.2e-06 55.8 57 45.6
Haze_02006 Corylus avellana HOM05D000186 ORTHO05D001124 3.8e-06 55.1 88 35.2
Psat0s1782g0160 Pisum sativum HOM05D000186 ORTHO05D001124 3.8e-06 55.1 61 42.6
Ca_15704_v3 Cicer arietinum L. HOM05D000186 ORTHO05D001124 8.5e-06 53.9 62 38.7
DCAR_006272 Daucus carota HOM05D000186 ORTHO05D001124 8.5e-06 53.9 33 66.7
VMungo1309G0919 Vigna mungo HOM05D000186 ORTHO05D001124 8.5e-06 53.9 61 42.6


User provided reference genes

Program Settings