Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.21809 Avicennia marina HOM05D005247 ORTHO05D006571 2.8e-241 838.2 422 100.0
SGA_v2.0_scaffold89G27537 Striga asiatica HOM05D005247 ORTHO05D006571 8.7e-150 534.3 414 65.9
Migut.N00115 Erythranthe guttata HOM05D005247 ORTHO05D006571 4.0e-147 525.4 424 64.9
SGA_v2.0_scaffold175G39318 Striga asiatica HOM05D005247 ORTHO05D006571 4.9e-137 491.9 408 62.7
QL06p007567 Quercus lobata HOM05D005247 ORTHO05D006571 6.3e-124 448.4 397 56.2
Rhsim04G0216900 Rhododendron simsii HOM05D005247 ORTHO05D006571 8.2e-124 448.0 341 63.9
Actinidia23422 Actinidia chinensis HOM05D005247 ORTHO05D006571 1.4e-123 447.2 331 64.4
Hma1.2p1_0078F.1_g040780 Hydrangea macrophylla HOM05D005247 ORTHO05D006571 1.8e-123 446.8 397 56.2
CSS0036429 Camellia sinensis var. sinensis HOM05D005247 ORTHO05D006571 3.1e-123 446.0 323 65.9
CiPaw.02G086000 Carya illinoinensis HOM05D005247 ORTHO05D006571 1.5e-122 443.7 402 55.0
Prupe.1G141100 Prunus persica HOM05D005247 ORTHO05D006571 1.3e-121 440.7 343 62.7
vmacro08197 Vaccinium macrocarpon HOM05D005247 ORTHO05D006571 3.2e-120 436.0 357 61.1
Solyc07g041930.3 Solanum lycopersicum HOM05D005247 ORTHO05D006571 7.2e-120 434.9 400 55.0
Nitab4.5_0006478g0050 Nicotiana tabacum HOM05D005247 ORTHO05D006571 2.7e-119 433.0 404 55.2
Sopen07g021430 Solanum pennellii HOM05D005247 ORTHO05D006571 2.7e-119 433.0 399 55.9
Nitab4.5_0001357g0080 Nicotiana tabacum HOM05D005247 ORTHO05D006571 4.7e-119 432.2 406 55.2
Nitab4.5_0009436g0020 Nicotiana tabacum HOM05D005247 ORTHO05D006571 8.8e-118 427.9 401 54.9
Lalb_Chr12g0196461 Lupinus albus HOM05D005247 ORTHO05D006571 9.7e-117 424.5 337 61.1
Nitab4.5_0000343g0170 Nicotiana tabacum HOM05D005247 ORTHO05D006571 8.2e-116 421.4 406 54.9
Cc03_g02260 Coffea canephora HOM05D005247 ORTHO05D006571 5.3e-115 418.7 406 53.7
MD13G1173000 Malus domestica HOM05D005247 ORTHO05D006571 5.3e-115 418.7 343 59.8
unitig_748.g7195 Utricularia gibba HOM05D005247 ORTHO05D006571 7.0e-115 418.3 318 65.1
CANSAT78G0941 Cannabis sativa HOM05D005247 ORTHO05D006571 1.2e-114 417.5 354 59.6
MD16G1174400 Malus domestica HOM05D005247 ORTHO05D006571 2.6e-114 416.4 341 59.8
Phvul.003G101400 Phaseolus vulgaris HOM05D005247 ORTHO05D006571 3.4e-114 416.0 317 63.1
VMungo1215G2055 Vigna mungo HOM05D005247 ORTHO05D006571 1.7e-113 413.7 323 62.5
Ca_21545_v3 Cicer arietinum L. HOM05D005247 ORTHO05D006571 2.9e-113 412.9 331 60.1
DCAR_024549 Daucus carota HOM05D005247 ORTHO05D006571 2.9e-113 412.9 310 63.2
Psat5g125320 Pisum sativum HOM05D005247 ORTHO05D006571 2.9e-113 412.9 382 55.0
Cfa015350 Carpinus fangiana HOM05D005247 ORTHO05D006571 3.8e-113 412.5 419 51.1
Medtr3g069790 Medicago truncatula HOM05D005247 ORTHO05D006571 8.5e-113 411.4 310 63.2
Peaxi162Scf00127g00146 Petunia axillaris HOM05D005247 ORTHO05D006571 8.5e-113 411.4 395 53.2
ECA234G2791 Erigeron canadensis HOM05D005247 ORTHO05D006571 1.1e-112 411.0 376 54.8
Glyma.17G023300 Glycine max HOM05D005247 ORTHO05D006571 1.4e-112 410.6 318 61.6
CAN.G311.32 Capsicum annuum HOM05D005247 ORTHO05D006571 1.9e-112 410.2 318 61.0
Glyma.07G251000 Glycine max HOM05D005247 ORTHO05D006571 1.9e-112 410.2 318 61.9
Lj4g0024405 Lotus japonicus HOM05D005247 ORTHO05D006571 2.5e-112 409.8 328 59.8
Carub.0007s2616 Capsella rubella HOM05D005247 ORTHO05D006571 2.1e-111 406.8 392 52.0
Duzib151G0039 Durio zibethinus HOM05D005247 ORTHO05D006571 2.1e-111 406.8 399 53.1
TAR362G0112 Trochodendron aralioides HOM05D005247 ORTHO05D006571 2.1e-111 406.8 408 52.0
HanXRQChr17g0562111 Helianthus annuus HOM05D005247 ORTHO05D006571 4.7e-111 405.6 376 53.7
TPR.G29803 Trifolium pratense HOM05D005247 ORTHO05D006571 6.1e-111 405.2 309 62.1
CARHR290040 Cardamine hirsuta HOM05D005247 ORTHO05D006571 8.0e-111 404.8 339 57.2
GSVIVG01017794001 Vitis vinifera HOM05D005247 ORTHO05D006571 3.0e-110 402.9 308 63.0
RcHm_v2.0_Chr4g0421281 Rosa chinensis HOM05D005247 ORTHO05D006571 3.9e-110 402.5 320 60.6
Eucgr.H03774 Eucalyptus grandis HOM05D005247 ORTHO05D006571 6.7e-110 401.7 341 56.9
Sp7g13890 Schrenkiella parvula HOM05D005247 ORTHO05D006571 2.0e-109 400.2 392 51.8
TPR.G28788 Trifolium pratense HOM05D005247 ORTHO05D006571 3.3e-109 399.4 320 59.1
AL7G39790 Arabidopsis lyrata HOM05D005247 ORTHO05D006571 4.4e-109 399.1 327 58.1
Thecc.04G278500 Theobroma cacao HOM05D005247 ORTHO05D006571 4.4e-109 399.1 325 58.2
Lsat_1_v5_gn_4_34220 Lactuca sativa HOM05D005247 ORTHO05D006571 7.4e-109 398.3 313 60.7
Atru.chr4.2766 Acer truncatum HOM05D005247 ORTHO05D006571 9.7e-109 397.9 322 60.6
Potri.008G205300 Populus trichocarpa HOM05D005247 ORTHO05D006571 9.7e-109 397.9 307 61.2
Nn7g38324 Nelumbo nucifera HOM05D005247 ORTHO05D006571 1.3e-108 397.5 325 56.6
THA.LOC104802559 Tarenaya hassleriana HOM05D005247 ORTHO05D006571 1.7e-108 397.1 395 50.9
Gorai.006G257600 Gossypium raimondii HOM05D005247 ORTHO05D006571 2.2e-108 396.7 397 51.1
FAN07G0437 Fragaria x ananassa HOM05D005247 ORTHO05D006571 2.8e-108 396.4 391 53.5
FvH4_4g17340 Fragaria vesca HOM05D005247 ORTHO05D006571 1.4e-107 394.0 335 57.9
Manes.15G016200 Manihot esculenta HOM05D005247 ORTHO05D006571 1.4e-107 394.0 321 59.8
PGR142G1936 Punica granatum HOM05D005247 ORTHO05D006571 2.4e-107 393.3 317 58.4
Gohir.A09G233900 Gossypium hirsutum HOM05D005247 ORTHO05D006571 3.1e-107 392.9 397 50.4
Ciclev10005079m.g Citrus clementina HOM05D005247 ORTHO05D006571 4.1e-107 392.5 290 63.1
Thhalv10025397m.g Eutrema salsugineum HOM05D005247 ORTHO05D006571 4.1e-107 392.5 396 50.0
AT4G15640 Arabidopsis thaliana HOM05D005247 ORTHO05D006571 9.1e-107 391.3 335 55.5
Aa31LG9G1800 Aethionema arabicum HOM05D005247 ORTHO05D006571 1.6e-106 390.6 339 54.6
Sp3g19500 Schrenkiella parvula HOM05D005247 ORTHO05D006571 1.6e-106 390.6 340 56.8
FAN17G1560 Fragaria x ananassa HOM05D005247 ORTHO05D006571 2.0e-106 390.2 427 49.9
Aqoxy5G00647 Aquilegia oxysepala HOM05D005247 ORTHO05D006571 5.9e-106 388.7 413 49.4
Ah.13g074520 Amaranthus hybridus HOM05D005247 ORTHO05D006571 7.7e-106 388.3 340 54.1
Gohir.D09G234700 Gossypium hirsutum HOM05D005247 ORTHO05D006571 1.0e-105 387.9 397 50.6
TWI09G0062 Tripterygium wilfordii HOM05D005247 ORTHO05D006571 1.3e-105 387.5 332 56.6
EL10Ac3g06569 Beta vulgaris HOM05D005247 ORTHO05D006571 5.0e-105 385.6 344 54.9
Sc13g0003580 Simmondsia chinensis HOM05D005247 ORTHO05D006571 1.9e-104 383.6 319 55.5
BcaC05g28162 Brassica carinata HOM05D005247 ORTHO05D006571 2.5e-104 383.3 321 57.6
A05p27200 Brassica napus HOM05D005247 ORTHO05D006571 2.5e-104 383.3 321 57.6
C05p41980 Brassica napus HOM05D005247 ORTHO05D006571 2.5e-104 383.3 321 57.6
BcaB06g26247 Brassica carinata HOM05D005247 ORTHO05D006571 3.2e-104 382.9 321 57.0
AUR62040732 Chenopodium quinoa HOM05D005247 ORTHO05D006571 5.5e-104 382.1 308 58.1
BolC5t32932H Brassica oleracea HOM05D005247 ORTHO05D006571 1.2e-103 380.9 325 56.9
BraA05t21609Z Brassica rapa HOM05D005247 ORTHO05D006571 1.2e-103 380.9 325 56.9
AT3G21465 Arabidopsis thaliana HOM05D005247 ORTHO05D006571 3.6e-103 379.4 321 56.1
FAN12G4219 Fragaria x ananassa HOM05D005247 ORTHO05D006571 4.7e-103 379.0 361 54.0
PSO541G1846 Papaver somniferum HOM05D005247 ORTHO05D006571 1.8e-102 377.1 352 53.1
Carub.0003s2149 Capsella rubella HOM05D005247 ORTHO05D006571 5.2e-102 375.6 399 49.4
AL3G35540 Arabidopsis lyrata HOM05D005247 ORTHO05D006571 1.2e-101 374.4 319 55.5
AUR62043783 Chenopodium quinoa HOM05D005247 ORTHO05D006571 9.7e-101 371.3 300 57.0
PSO675G0879 Papaver somniferum HOM05D005247 ORTHO05D006571 1.3e-100 370.9 399 48.1
Haze_01257 Corylus avellana HOM05D005247 ORTHO05D006571 2.8e-100 369.8 395 49.1
Cpa.g.sc16.124 Carica papaya HOM05D005247 ORTHO05D006571 4.8e-100 369.0 382 50.5
ClCG05G005860 Citrullus lanatus HOM05D005247 ORTHO05D006571 1.1e-99 367.9 384 49.7
CsaV3_3G014210 Cucumis sativus L. HOM05D005247 ORTHO05D006571 1.2e-98 364.4 379 50.1
arahy.Tifrunner.gnm1.ann1.8Y06GW Arachis hypogaea HOM05D005247 ORTHO05D006571 5.9e-98 362.1 324 52.8
arahy.Tifrunner.gnm1.ann1.A4UT9N Arachis hypogaea HOM05D005247 ORTHO05D006571 2.9e-97 359.8 324 53.1
Dinv38319 Davidia involucrata HOM05D005247 ORTHO05D006571 1.1e-96 357.8 256 67.2
Thhalv10021000m.g Eutrema salsugineum HOM05D005247 ORTHO05D006571 2.0e-93 347.1 326 52.5
TAR633G1275 Trochodendron aralioides HOM05D005247 ORTHO05D006571 9.8e-93 344.7 323 54.2
Os07g0668200 Oryza sativa ssp. japonica HOM05D005247 ORTHO05D006571 2.2e-92 343.6 310 52.3
FAN12G3211 Fragaria x ananassa HOM05D005247 ORTHO05D006571 6.3e-92 342.0 336 51.5
Sed0017520 Sechium edule HOM05D005247 ORTHO05D006571 6.3e-92 342.0 321 52.3
Zm00001eb330100 Zea mays HOM05D005247 ORTHO05D006571 2.4e-91 340.1 309 52.8
Dinv44420 Davidia involucrata HOM05D005247 ORTHO05D006571 4.5e-90 335.9 231 68.4
Hma1.2p1_3003F.1_g331535 Hydrangea macrophylla HOM05D005247 ORTHO05D006571 1.9e-88 330.5 336 51.2
ATR0706G238 Amborella trichopoda HOM05D005247 ORTHO05D006571 8.9e-86 321.6 316 48.7
vmacro08194 Vaccinium macrocarpon HOM05D005247 ORTHO05D006571 2.4e-83 313.5 286 57.0
BcaB04g18303 Brassica carinata HOM05D005247 ORTHO05D006571 1.6e-79 300.8 244 58.6
MELO3C006614.2 Cucumis melo HOM05D005247 ORTHO05D006571 8.9e-78 295.0 238 56.7
BolC8t48291H Brassica oleracea HOM05D005247 ORTHO05D006571 4.4e-77 292.7 345 45.5
Hund20585 Selenicereus undatus HOM05D005247 ORTHO05D006571 4.7e-71 272.7 197 64.0
Eucgr.H03753 Eucalyptus grandis HOM05D005247 ORTHO05D006571 6.2e-71 272.3 230 57.8
Sabra08G0156600 Salix brachista HOM05D005247 ORTHO05D006571 2.4e-67 260.4 193 61.7
Atru.chr4.2761 Acer truncatum HOM05D005247 ORTHO05D006571 7.0e-67 258.8 198 62.1
COL.COLO4_13921 Corchorus olitorius HOM05D005247 ORTHO05D006571 1.6e-63 247.7 355 39.7
Psat4g226360 Pisum sativum HOM05D005247 ORTHO05D006571 2.8e-63 246.9 341 41.6
Lj6A670T87 Lonicera japonica HOM05D005247 ORTHO05D006571 2.3e-57 227.3 175 61.7
SHI00299 Sapria himalayana HOM05D005247 ORTHO05D000987 7.8e-50 202.2 263 41.8
RcHm_v2.0_Chr4g0421901 Rosa chinensis HOM05D005247 ORTHO05D006571 2.8e-47 193.7 197 51.3
BraA08t33173Z Brassica rapa HOM05D005247 ORTHO05D006571 2.5e-40 170.6 123 63.4
Eucgr.C02045 Eucalyptus grandis HOM05D005247 ORTHO05D006571 3.4e-37 160.2 132 59.8
Mapoly0002s0143 Marchantia polymorpha HOM05D005247 ORTHO05D006571 2.7e-34 150.6 340 27.9
Sabra08G0156700 Salix brachista HOM05D005247 ORTHO05D006571 3.9e-33 146.7 123 58.5
HPP92_013697 Vanilla planifolia HOM05D005247 ORTHO05D006571 8.1e-31 139.0 179 39.7
Pp3c14_15200 Physcomitrium patens HOM05D005247 ORTHO05D006571 1.8e-30 137.9 286 29.4
AagrBONN_evm.TU.Sc2ySwM_228.2885 Anthoceros agrestis HOM05D005247 ORTHO05D006571 7.6e-29 132.5 219 38.4
Psat5g177080 Pisum sativum HOM05D005247 ORTHO05D006571 1.4e-27 128.3 194 36.6
Psat6g103040 Pisum sativum HOM05D005247 ORTHO05D006571 1.0e-25 122.1 76 69.7
SEGI_33954 Sequoiadendron giganteum HOM05D005247 ORTHO05D000001 1.3e-23 115.2 148 40.5
RcHm_v2.0_Chr4g0421891 Rosa chinensis HOM05D005247 ORTHO05D006571 2.8e-23 114.0 86 64.0
CBR_g30222 Chara braunii HOM05D005247 ORTHO05D006571 3.4e-21 107.1 310 24.8
BcaC07g37894 Brassica carinata HOM05D005247 ORTHO05D006571 7.6e-21 105.9 145 43.4
Eucgr.F02603 Eucalyptus grandis HOM05D005247 ORTHO05D006571 3.8e-20 103.6 68 69.1
CAN.G640.20 Capsicum annuum HOM05D005247 ORTHO05D006571 1.9e-19 101.3 118 44.9
SMO202G0041 Selaginella moellendorffii HOM05D005247 ORTHO05D006571 1.6e-18 98.2 249 26.5
Actinidia40231 Actinidia chinensis HOM05D005247 ORTHO05D006571 8.7e-17 92.4 91 50.5
Eucgr.H03759 Eucalyptus grandis HOM05D005247 ORTHO05D006571 2.4e-14 84.3 85 48.2
Pp3c14_7470 Physcomitrium patens HOM05D005247 ORTHO05D006571 5.0e-12 76.6 289 23.9
CAN.G640.21 Capsicum annuum HOM05D005247 ORTHO05D006571 8.8e-09 65.9 65 44.6
FAN22G1325 Fragaria x ananassa HOM05D005247 ORTHO05D006571 2.5e-08 64.3 71 45.1


User provided reference genes

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