Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.21799 Avicennia marina HOM05D006081 ORTHO05D007628 2.4e-99 365.5 192 100.0
SGA_v2.0_scaffold55G19699 Striga asiatica HOM05D006081 ORTHO05D007628 4.0e-70 268.5 194 72.2
Migut.N00097 Erythranthe guttata HOM05D006081 ORTHO05D007628 1.5e-69 266.5 191 74.3
SalBow5G1281 Salvia bowleyana HOM05D006081 ORTHO05D007628 8.4e-68 260.8 193 71.5
Oeu027733.1 Olea europaea HOM05D006081 ORTHO05D007628 2.7e-66 255.8 194 71.1
Dinv29771 Davidia involucrata HOM05D006081 ORTHO05D007628 3.7e-63 245.4 191 64.4
Nitab4.5_0003749g0060 Nicotiana tabacum HOM05D006081 ORTHO05D007628 2.9e-60 235.7 186 64.5
PGSC0003DMG400022662 Solanum tuberosum HOM05D006081 ORTHO05D007628 2.9e-60 235.7 189 63.5
Sopen01g028790 Solanum pennellii HOM05D006081 ORTHO05D007628 5.0e-60 235.0 188 63.3
Solyc01g067080.3 Solanum lycopersicum HOM05D006081 ORTHO05D007628 6.5e-60 234.6 188 62.8
Rhsim04G0220300 Rhododendron simsii HOM05D006081 ORTHO05D007628 8.5e-60 234.2 191 61.3
vmacro08134 Vaccinium macrocarpon HOM05D006081 ORTHO05D007628 2.5e-59 232.6 193 61.1
Nitab4.5_0003972g0010 Nicotiana tabacum HOM05D006081 ORTHO05D007628 4.2e-59 231.9 186 63.4
Oeu023291.2 Olea europaea HOM05D006081 ORTHO05D007628 5.5e-59 231.5 227 57.3
Actinidia40266 Actinidia chinensis HOM05D006081 ORTHO05D007628 9.4e-59 230.7 187 63.1
unitig_26.g10542 Utricularia gibba HOM05D006081 ORTHO05D007628 1.2e-58 230.3 187 62.0
Cfa015373 Carpinus fangiana HOM05D006081 ORTHO05D007628 1.4e-57 226.9 196 60.7
Cc00_g10580 Coffea canephora HOM05D006081 ORTHO05D007628 1.4e-57 226.9 192 62.5
CSS0030149 Camellia sinensis var. sinensis HOM05D006081 ORTHO05D007628 3.0e-57 225.7 192 61.5
TAR636G3617 Trochodendron aralioides HOM05D006081 ORTHO05D007628 1.5e-56 223.4 196 60.7
Peaxi162Scf00534g00212 Petunia axillaris HOM05D006081 ORTHO05D007628 9.7e-56 220.7 190 60.0
Prupe.1G138200 Prunus persica HOM05D006081 ORTHO05D007628 1.3e-55 220.3 199 61.3
Atru.chr4.2827 Acer truncatum HOM05D006081 ORTHO05D007628 2.2e-55 219.5 182 61.0
GSVIVG01017744001 Vitis vinifera HOM05D006081 ORTHO05D007628 4.8e-55 218.4 197 59.4
CiPaw.01G149700 Carya illinoinensis HOM05D006081 ORTHO05D007628 1.1e-54 217.2 199 59.8
Eucgr.H03897 Eucalyptus grandis HOM05D006081 ORTHO05D007628 5.3e-54 214.9 193 58.5
Manes.03G194000 Manihot esculenta HOM05D006081 ORTHO05D007628 6.9e-54 214.5 193 57.5
Cpa.g.sc16.161 Carica papaya HOM05D006081 ORTHO05D007628 9.1e-54 214.2 193 60.6
Thecc.04G283000 Theobroma cacao HOM05D006081 ORTHO05D007628 1.2e-53 213.8 191 60.7
CiPaw.02G083900 Carya illinoinensis HOM05D006081 ORTHO05D007628 1.5e-53 213.4 195 56.9
Duzib151G0152 Durio zibethinus HOM05D006081 ORTHO05D007628 2.0e-53 213.0 190 59.5
MD16G1171400 Malus domestica HOM05D006081 ORTHO05D007628 3.4e-53 212.2 196 57.7
Manes.15G013500 Manihot esculenta HOM05D006081 ORTHO05D007628 5.9e-53 211.5 195 57.9
HanXRQChr03g0079991 Helianthus annuus HOM05D006081 ORTHO05D007628 3.8e-52 208.8 190 56.3
TWI53G0242 Tripterygium wilfordii HOM05D006081 ORTHO05D007628 5.0e-52 208.4 186 55.4
Potri.008G210100 Populus trichocarpa HOM05D006081 ORTHO05D007628 1.1e-51 207.2 191 55.5
Lj6g0000146 Lotus japonicus HOM05D006081 ORTHO05D007628 1.4e-51 206.8 193 55.4
Lj6A673G88 Lonicera japonica HOM05D006081 ORTHO05D007628 1.9e-51 206.5 136 70.6
QL06p008580 Quercus lobata HOM05D006081 ORTHO05D007628 2.5e-51 206.1 194 58.8
RcHm_v2.0_Chr4g0421971 Rosa chinensis HOM05D006081 ORTHO05D007628 7.2e-51 204.5 194 58.2
MBI19_g30830_MAGBIO Magnolia biondii HOM05D006081 ORTHO05D007628 1.2e-50 203.8 193 55.4
Medtr2g436940 Medicago truncatula HOM05D006081 ORTHO05D007628 1.2e-50 203.8 202 54.5
Sabra08G0154300 Salix brachista HOM05D006081 ORTHO05D007628 1.2e-50 203.8 191 55.0
Gohir.A02G048800 Gossypium hirsutum HOM05D006081 ORTHO05D007628 1.6e-50 203.4 193 56.0
arahy.Tifrunner.gnm1.ann1.TA2ZSY Arachis hypogaea HOM05D006081 ORTHO05D007628 2.7e-50 202.6 185 57.3
Ciclev10005978m.g Citrus clementina HOM05D006081 ORTHO05D007628 2.7e-50 202.6 186 56.5
Thhalv10021583m.g Eutrema salsugineum HOM05D006081 ORTHO05D007628 2.7e-50 202.6 189 58.2
Gohir.D02G054100 Gossypium hirsutum HOM05D006081 ORTHO05D007628 2.7e-50 202.6 188 57.4
Gorai.005G059600 Gossypium raimondii HOM05D006081 ORTHO05D007628 2.7e-50 202.6 188 57.4
arahy.Tifrunner.gnm1.ann1.EZB5Q6 Arachis hypogaea HOM05D006081 ORTHO05D007628 3.6e-50 202.2 185 56.8
Sp3g19430 Schrenkiella parvula HOM05D006081 ORTHO05D007628 3.6e-50 202.2 190 57.9
Glyma.15G153100 Glycine max HOM05D006081 ORTHO05D007628 7.9e-50 201.1 193 56.0
Lalb_Chr18g0051761 Lupinus albus HOM05D006081 ORTHO05D007628 7.9e-50 201.1 191 52.4
VMungo1309G0529 Vigna mungo HOM05D006081 ORTHO05D007628 7.9e-50 201.1 193 54.4
Ca_01966_v3 Cicer arietinum L. HOM05D006081 ORTHO05D007628 1.8e-49 199.9 198 54.0
THA.LOC104820251 Tarenaya hassleriana HOM05D006081 ORTHO05D007628 1.8e-49 199.9 190 57.4
CARHR097370 Cardamine hirsuta HOM05D006081 ORTHO05D007628 2.3e-49 199.5 190 56.8
CsaV3_6G017270 Cucumis sativus L. HOM05D006081 ORTHO05D007628 3.0e-49 199.1 187 55.6
Lsat_1_v5_gn_5_49301 Lactuca sativa HOM05D006081 ORTHO05D007628 3.0e-49 199.1 183 57.4
PGR031G1107 Punica granatum HOM05D006081 ORTHO05D007628 3.0e-49 199.1 182 53.8
BcaC01g03506 Brassica carinata HOM05D006081 ORTHO05D007628 3.9e-49 198.7 188 55.9
BolC3t17454H Brassica oleracea HOM05D006081 ORTHO05D007628 3.9e-49 198.7 188 55.9
ClCG06G005230 Citrullus lanatus HOM05D006081 ORTHO05D007628 6.7e-49 198.0 193 52.8
Psat1g153280 Pisum sativum HOM05D006081 ORTHO05D007628 6.7e-49 198.0 199 53.8
TAR365G0221 Trochodendron aralioides HOM05D006081 ORTHO05D007628 8.8e-49 197.6 181 55.2
MELO3C021343.2 Cucumis melo HOM05D006081 ORTHO05D007628 1.1e-48 197.2 187 56.1
FAN07G2255 Fragaria x ananassa HOM05D006081 ORTHO05D007628 1.1e-48 197.2 189 54.0
FvH4_4g17860 Fragaria vesca HOM05D006081 ORTHO05D007628 1.5e-48 196.8 193 56.0
Phvul.009G246800 Phaseolus vulgaris HOM05D006081 ORTHO05D007628 1.5e-48 196.8 193 53.9
C03p51690 Brassica napus HOM05D006081 ORTHO05D007628 2.6e-48 196.1 188 54.8
DCAR_030534 Daucus carota HOM05D006081 ORTHO05D007628 2.6e-48 196.1 200 51.0
AT3G21400 Arabidopsis thaliana HOM05D006081 ORTHO05D007628 4.4e-48 195.3 189 57.7
FAN12G2613 Fragaria x ananassa HOM05D006081 ORTHO05D007628 7.4e-48 194.5 193 55.4
PSO170G3586 Papaver somniferum HOM05D006081 ORTHO05D007628 7.4e-48 194.5 185 55.7
Sed0014998 Sechium edule HOM05D006081 ORTHO05D007628 7.4e-48 194.5 193 54.4
A03p42230 Brassica napus HOM05D006081 ORTHO05D007628 9.7e-48 194.1 188 54.8
FAN17G1774 Fragaria x ananassa HOM05D006081 ORTHO05D007628 1.7e-47 193.4 189 53.4
PSO210G2816 Papaver somniferum HOM05D006081 ORTHO05D007628 2.2e-47 193.0 184 54.9
AL3G35480 Arabidopsis lyrata HOM05D006081 ORTHO05D007628 2.8e-47 192.6 188 55.3
BraA03t13376Z Brassica rapa HOM05D006081 ORTHO05D007628 2.8e-47 192.6 188 54.3
Glyma.09G045900 Glycine max HOM05D006081 ORTHO05D007628 3.7e-47 192.2 193 53.4
ECA240G0281 Erigeron canadensis HOM05D006081 ORTHO05D007628 2.4e-46 189.5 194 53.1
Sc13g0003510 Simmondsia chinensis HOM05D006081 ORTHO05D007628 3.1e-46 189.1 187 53.5
Carub.0003s2143 Capsella rubella HOM05D006081 ORTHO05D007628 4.1e-46 188.7 189 54.0
BcaB04g19166 Brassica carinata HOM05D006081 ORTHO05D007628 1.2e-45 187.2 188 53.2
BcaC05g28170 Brassica carinata HOM05D006081 ORTHO05D007628 1.2e-45 187.2 188 55.3
C05p42070 Brassica napus HOM05D006081 ORTHO05D007628 1.2e-45 187.2 188 55.3
BolC5t32937H Brassica oleracea HOM05D006081 ORTHO05D007628 1.2e-45 187.2 188 55.3
Aa31LG8G8110 Aethionema arabicum HOM05D006081 ORTHO05D007628 1.5e-45 186.8 188 53.2
Lalb_Chr20g0114491 Lupinus albus HOM05D006081 ORTHO05D007628 4.5e-45 185.3 189 51.3
BcaB06g26235 Brassica carinata HOM05D006081 ORTHO05D007628 1.3e-44 183.7 188 55.3
TPR.G26808 Trifolium pratense HOM05D006081 ORTHO05D007628 1.3e-44 183.7 131 66.4
CANSAT78G1428 Cannabis sativa HOM05D006081 ORTHO05D007628 1.7e-44 183.3 195 50.8
CAN.G556.12 Capsicum annuum HOM05D006081 ORTHO05D007628 2.5e-43 179.5 114 75.4
CSS0018730 Camellia sinensis var. sinensis HOM05D006081 ORTHO05D007628 4.7e-42 175.3 116 68.1
EL10Ac3g06586 Beta vulgaris HOM05D006081 ORTHO05D007628 8.0e-42 174.5 187 47.1
AUR62043167 Chenopodium quinoa HOM05D006081 ORTHO05D007628 3.0e-41 172.6 127 59.8
Aqoxy2G03026 Aquilegia oxysepala HOM05D006081 ORTHO05D007628 5.2e-41 171.8 135 63.0
FAN12G2474 Fragaria x ananassa HOM05D006081 ORTHO05D007628 2.0e-40 169.9 115 69.6
A05p27230 Brassica napus HOM05D006081 ORTHO05D007628 1.3e-39 167.2 171 57.3
BraA05t21612Z Brassica rapa HOM05D006081 ORTHO05D007628 1.7e-39 166.8 170 55.3
AUR62036825 Chenopodium quinoa HOM05D006081 ORTHO05D007628 3.7e-39 165.6 128 59.4
CDE02G2676 Ceratophyllum demersum HOM05D006081 ORTHO05D000739 1.8e-38 163.3 192 46.9
CDE09G1305 Ceratophyllum demersum HOM05D006081 ORTHO05D007628 2.5e-35 152.9 192 43.8
ATR0706G092 Amborella trichopoda HOM05D006081 ORTHO05D007628 6.1e-34 148.3 124 59.7
SEGI_25455 Sequoiadendron giganteum HOM05D006081 ORTHO05D007628 2.6e-32 142.9 193 40.9
Zm00001eb410420 Zea mays HOM05D006081 ORTHO05D007628 5.7e-32 141.7 195 41.5
Os12g0540700 Oryza sativa ssp. japonica HOM05D006081 ORTHO05D007628 1.7e-31 140.2 122 53.3
Actinidia01470 Actinidia chinensis HOM05D006081 ORTHO05D007628 2.8e-31 139.4 187 43.9
Haze_01224 Corylus avellana HOM05D006081 ORTHO05D007628 5.0e-28 128.6 76 75.0
TAR365G0700 Trochodendron aralioides HOM05D006081 ORTHO05D007628 6.5e-28 128.3 96 61.5
AUR62038616 Chenopodium quinoa HOM05D006081 ORTHO05D007628 3.2e-27 125.9 94 57.4
HPP92_001321 Vanilla planifolia HOM05D006081 ORTHO05D007628 7.2e-27 124.8 177 42.4
MBI19_g12810_MAGBIO Magnolia biondii HOM05D006081 ORTHO05D007628 1.6e-26 123.6 99 57.6
MD13G1169900 Malus domestica HOM05D006081 ORTHO05D007628 1.2e-24 117.5 132 54.5
CSS0011440 Camellia sinensis var. sinensis HOM05D006081 ORTHO05D007628 4.5e-21 105.5 113 54.0
Potri.010G024000 Populus trichocarpa HOM05D006081 ORTHO05D007628 6.6e-20 101.7 66 65.2
Pp3c1_29830 Physcomitrium patens HOM05D006081 ORTHO05D007628 2.6e-16 89.7 124 34.7
AagrBONN_evm.TU.Sc2ySwM_368.2309 Anthoceros agrestis HOM05D006081 ORTHO05D007628 4.1e-14 82.4 109 36.7
Nn5g30060 Nelumbo nucifera HOM05D006081 ORTHO05D007628 5.4e-14 82.0 108 50.0
Haze_01225 Corylus avellana HOM05D006081 ORTHO05D007628 2.0e-13 80.1 103 51.5
Mapoly0041s0011 Marchantia polymorpha HOM05D006081 ORTHO05D007628 3.5e-13 79.3 127 35.4
CBR_g29894 Chara braunii HOM05D008095 ORTHO05D010826 5.0e-12 75.5 115 33.9
Hma1.2p1_1676F.1_g297010 Hydrangea macrophylla HOM05D006081 ORTHO05D007628 2.2e-07 60.1 42 64.3
FAN22G0279 Fragaria x ananassa HOM05D006081 ORTHO05D007628 4.9e-07 58.9 96 43.8
BolC7t43135H Brassica oleracea HOM05D006081 ORTHO05D033520 1.4e-06 57.4 42 61.9


User provided reference genes

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