Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.21797 Avicennia marina HOM05D006719 ORTHO05D007063 2.1e-52 209.1 141 100.0
Peaxi162Scf00534g00017 Petunia axillaris HOM05D006719 ORTHO05D007063 7.9e-23 110.9 147 48.3
CSS0008404 Camellia sinensis var. sinensis HOM05D006719 ORTHO05D007063 1.4e-22 110.2 132 72.0
CSS0019267 Camellia sinensis var. sinensis HOM05D006719 ORTHO05D007063 1.4e-22 110.2 132 72.0
Cfa015380 Carpinus fangiana HOM05D006719 ORTHO05D007063 7.4e-21 104.4 134 50.0
DCAR_030531 Daucus carota HOM05D006719 ORTHO05D007063 1.7e-20 103.2 132 70.5
Gorai.006G263400 Gossypium raimondii HOM05D006719 ORTHO05D007063 1.5e-18 96.7 131 67.2
VMungo1309G0351 Vigna mungo HOM05D006719 ORTHO05D007063 2.6e-18 95.9 138 62.3
SGA_v2.0_scaffold147G36286 Striga asiatica HOM05D006719 ORTHO05D007063 1.3e-17 93.6 109 67.9
vmacro08144 Vaccinium macrocarpon HOM05D006719 ORTHO05D007063 1.7e-17 93.2 132 63.6
vmacro22972 Vaccinium macrocarpon HOM05D006719 ORTHO05D007063 1.7e-17 93.2 132 63.6
Oeu037752.1 Olea europaea HOM05D006719 ORTHO05D007063 2.2e-17 92.8 144 63.9
THA.LOC104821772 Tarenaya hassleriana HOM05D006719 ORTHO05D007063 3.8e-17 92.0 125 65.6
Duzib151G0940 Durio zibethinus HOM05D006719 ORTHO05D007063 8.5e-17 90.9 130 66.9
SalBow2G1281 Salvia bowleyana HOM05D006719 ORTHO05D007063 8.5e-17 90.9 56 78.6
Ciclev10006148m.g Citrus clementina HOM05D006719 ORTHO05D007063 2.5e-16 89.4 132 64.4
Dinv29768 Davidia involucrata HOM05D001303 ORTHO05D001129 2.5e-16 89.4 142 61.3
Dinv44385 Davidia involucrata HOM05D006719 ORTHO05D007063 2.5e-16 89.4 136 64.7
Solyc01g066900.4 Solanum lycopersicum HOM05D006719 ORTHO05D007063 4.2e-16 88.6 147 59.9
Potri.008G207500 Populus trichocarpa HOM05D006719 ORTHO05D007063 9.4e-16 87.4 125 64.8
Gohir.A09G239500 Gossypium hirsutum HOM05D006719 ORTHO05D007063 2.1e-15 86.3 96 78.1
Actinidia40259 Actinidia chinensis HOM05D006719 ORTHO05D007063 2.7e-15 85.9 145 60.0
CiPaw.01G149100 Carya illinoinensis HOM05D006719 ORTHO05D007063 6.1e-15 84.7 135 45.9
Duzib212G0625 Durio zibethinus HOM05D006719 ORTHO05D007063 7.9e-15 84.3 131 63.4
Migut.G00270 Erythranthe guttata HOM05D006719 ORTHO05D007063 7.9e-15 84.3 97 78.4
FAN17G0015 Fragaria x ananassa HOM05D006719 ORTHO05D007063 1.0e-14 84.0 135 41.5
Hma1.2p1_2670F.1_g326650 Hydrangea macrophylla HOM05D006719 ORTHO05D007063 1.0e-14 84.0 132 63.6
COL.COLO4_13881 Corchorus olitorius HOM05D006719 ORTHO05D007063 1.8e-14 83.2 131 64.1
Sopen01g028510 Solanum pennellii HOM05D006719 ORTHO05D007063 2.3e-14 82.8 147 58.5
FAN07G2874 Fragaria x ananassa HOM05D006719 ORTHO05D007063 5.2e-14 81.6 132 42.4
Peaxi162Scf00024g00041 Petunia axillaris HOM05D006719 ORTHO05D007063 6.7e-14 81.3 131 61.1
Gohir.D09G240400 Gossypium hirsutum HOM05D006719 ORTHO05D007063 1.5e-13 80.1 96 76.0
Thecc.04G284000 Theobroma cacao HOM05D006719 ORTHO05D007063 1.5e-13 80.1 131 62.6
Peaxi162Scf00024g00231 Petunia axillaris HOM05D006719 ORTHO05D007063 2.6e-13 79.3 124 61.3
BraA08t33189Z Brassica rapa HOM05D006719 ORTHO05D007063 1.3e-12 77.0 131 58.8
ECA233G1326 Erigeron canadensis HOM05D006719 ORTHO05D007063 1.3e-12 77.0 108 67.6
MD13G1169300 Malus domestica HOM05D006719 ORTHO05D007063 2.2e-12 76.3 124 60.5
BcaC07g37932 Brassica carinata HOM05D006719 ORTHO05D007063 2.8e-12 75.9 109 41.3
BolC8t48317H Brassica oleracea HOM05D006719 ORTHO05D007063 2.8e-12 75.9 109 41.3
HanXRQChr08g0227651 Helianthus annuus HOM05D006719 ORTHO05D007063 2.8e-12 75.9 111 65.8
PSO170G6252 Papaver somniferum HOM05D006719 ORTHO05D007063 3.7e-12 75.5 120 61.7
Nn4g25876 Nelumbo nucifera HOM05D006719 ORTHO05D007063 4.8e-12 75.1 133 56.4
Gorai.011G189600 Gossypium raimondii HOM05D006719 ORTHO05D007063 1.4e-11 73.6 132 59.8
Gohir.D10G170100 Gossypium hirsutum HOM05D006719 ORTHO05D007063 1.8e-11 73.2 132 59.8
Manes.03G194500 Manihot esculenta HOM05D006719 ORTHO05D007063 1.8e-11 73.2 142 57.7
A08p11980 Brassica napus HOM05D006719 ORTHO05D007063 2.4e-11 72.8 100 43.0
Prupe.1G137900 Prunus persica HOM05D006719 ORTHO05D007063 3.1e-11 72.4 131 60.3
Zm00001eb137600 Zea mays HOM05D006719 ORTHO05D007063 3.1e-11 72.4 102 57.8
MBI19_g42338_MAGBIO Magnolia biondii HOM05D006719 ORTHO05D007063 4.1e-11 72.0 161 50.9
Gohir.A10G163700 Gossypium hirsutum HOM05D006719 ORTHO05D007063 1.6e-10 70.1 132 59.1
Phvul.009G247500 Phaseolus vulgaris HOM05D006719 ORTHO05D007063 1.6e-10 70.1 143 55.2
HPP92_017216 Vanilla planifolia HOM05D006719 ORTHO05D007063 1.6e-10 70.1 103 52.4
Lj6g0006694 Lotus japonicus HOM05D006719 ORTHO05D007063 2.0e-10 69.7 131 61.8
Psat1g153440 Pisum sativum HOM05D006719 ORTHO05D007063 2.0e-10 69.7 140 57.9
AUR62040366 Chenopodium quinoa HOM05D006719 ORTHO05D007063 2.6e-10 69.3 148 37.2
Potri.010G024600 Populus trichocarpa HOM05D006719 ORTHO05D007063 2.6e-10 69.3 145 53.8
Atru.chr4.2828 Acer truncatum HOM05D006719 ORTHO05D007063 5.9e-10 68.2 133 58.6
PGSC0003DMG400011322 Solanum tuberosum HOM05D006719 ORTHO05D007063 7.7e-10 67.8 147 55.1
Carub.0007s2587 Capsella rubella HOM05D006719 ORTHO05D007063 1.7e-09 66.6 135 54.8
CiPaw.02G083300 Carya illinoinensis HOM05D006719 ORTHO05D007063 2.2e-09 66.2 131 57.3
FAN12G0931 Fragaria x ananassa HOM05D006719 ORTHO05D007063 2.2e-09 66.2 127 57.5
MD16G1170500 Malus domestica HOM05D006719 ORTHO05D007063 2.2e-09 66.2 120 58.3
PSO210G7501 Papaver somniferum HOM05D006719 ORTHO05D007063 2.9e-09 65.9 120 58.3
Duzib052G0445 Durio zibethinus HOM05D006719 ORTHO05D007063 5.0e-09 65.1 130 58.5
MBI18_g14088_MAGBIO Magnolia biondii HOM05D000713 ORTHO05D000547 8.5e-09 64.3 96 39.6
FvH4_4g17930 Fragaria vesca HOM05D006719 ORTHO05D007063 1.1e-08 63.9 127 56.7
Cpa.g.sc16.165 Carica papaya HOM05D006719 ORTHO05D007063 1.5e-08 63.5 46 67.4
Glyma.15G147300 Glycine max HOM05D006719 ORTHO05D007063 1.5e-08 63.5 140 55.0
Sabra10G0014400 Salix brachista HOM05D006719 ORTHO05D007063 1.5e-08 63.5 170 34.1
RcHm_v2.0_Chr4g0422101 Rosa chinensis HOM05D006719 ORTHO05D007063 2.5e-08 62.8 127 57.5
GSVIVG01017752001 Vitis vinifera HOM05D006719 ORTHO05D007063 2.5e-08 62.8 149 53.7
Ca_01942_v3 Cicer arietinum L. HOM05D006719 ORTHO05D007063 1.2e-07 60.5 128 57.8
Lalb_Chr15g0083521 Lupinus albus HOM05D006719 ORTHO05D007063 1.2e-07 60.5 131 57.3
Nn3g21430 Nelumbo nucifera HOM05D006719 ORTHO05D007063 1.2e-07 60.5 132 54.5
TAR362G0876 Trochodendron aralioides HOM05D006719 ORTHO05D007063 1.6e-07 60.1 112 58.9
FAN12G0915 Fragaria x ananassa HOM05D006719 ORTHO05D007063 6.1e-07 58.2 105 61.9
THA.LOC104820261 Tarenaya hassleriana HOM05D006719 ORTHO05D007063 8.0e-07 57.8 47 61.7
unitig_37.g12394 Utricularia gibba HOM05D006719 ORTHO05D007063 8.0e-07 57.8 112 58.0
Actinidia01465 Actinidia chinensis HOM05D006719 ORTHO05D007063 1.4e-06 57.0 64 56.2
BraA01t02080Z Brassica rapa HOM05D020768 ORTHO05D007063 1.8e-06 56.6 167 44.9
Aqoxy5G00712 Aquilegia oxysepala HOM05D006719 ORTHO05D007063 2.3e-06 56.2 55 52.7
Lsat_1_v5_gn_6_15060 Lactuca sativa HOM05D006719 ORTHO05D007063 2.3e-06 56.2 129 55.8
CANSAT78G1100 Cannabis sativa HOM05D006719 ORTHO05D007063 3.0e-06 55.8 41 68.3
Aqoxy2G03000 Aquilegia oxysepala HOM05D000520 ORTHO05D000399 6.7e-06 54.7 149 47.7
TAR365G1095 Trochodendron aralioides HOM05D006719 ORTHO05D007063 6.7e-06 54.7 133 54.1
CDE02G4366 Ceratophyllum demersum HOM05D065966 ORTHO05D007063 8.8e-06 54.3 127 44.1
Thhalv10026485m.g Eutrema salsugineum HOM05D006719 ORTHO05D007063 8.8e-06 54.3 134 52.2
Glyma.09G045300 Glycine max HOM05D006719 ORTHO05D007063 8.8e-06 54.3 140 52.1
Manes.15G012900 Manihot esculenta HOM05D006719 ORTHO05D007063 8.8e-06 54.3 145 52.4
QL06p008791 Quercus lobata HOM05D006719 ORTHO05D007063 8.8e-06 54.3 42 71.4


User provided reference genes

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