Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.21625 Avicennia marina HOM05D005667 ORTHO05D007299 2.9e-216 755.0 394 100.0
SGA_v2.0_scaffold2G01401 Striga asiatica HOM05D005667 ORTHO05D007299 6.0e-169 597.8 390 78.5
Migut.D00204 Erythranthe guttata HOM05D005667 ORTHO05D007299 1.8e-165 586.3 394 79.7
Hma1.2p1_0209F.1_g088490 Hydrangea macrophylla HOM05D005667 ORTHO05D007299 7.8e-161 570.9 391 74.9
SalBow3G0511 Salvia bowleyana HOM05D005667 ORTHO05D007299 3.0e-160 568.9 368 80.4
Dinv33042 Davidia involucrata HOM05D005667 ORTHO05D007299 4.3e-159 565.1 387 70.8
CiPaw.07G107100 Carya illinoinensis HOM05D005667 ORTHO05D007299 1.5e-156 556.6 387 72.6
TAR365G0445 Trochodendron aralioides HOM05D005667 ORTHO05D007299 1.9e-154 549.7 390 68.7
Cfa005935 Carpinus fangiana HOM05D005667 ORTHO05D007299 7.1e-154 547.7 391 69.1
MD11G1306000 Malus domestica HOM05D005667 ORTHO05D007299 9.3e-154 547.4 386 67.4
TAR627G0762 Trochodendron aralioides HOM05D005667 ORTHO05D007299 9.3e-154 547.4 390 69.0
CSS0019258 Camellia sinensis var. sinensis HOM05D005667 ORTHO05D007299 1.2e-153 547.0 390 74.9
Actinidia32226 Actinidia chinensis HOM05D005667 ORTHO05D007299 1.6e-153 546.6 385 69.9
COL.COLO4_23365 Corchorus olitorius HOM05D005667 ORTHO05D007299 1.6e-153 546.6 391 72.1
MD03G1286100 Malus domestica HOM05D005667 ORTHO05D007299 1.6e-153 546.6 386 66.8
QL12p027280 Quercus lobata HOM05D005667 ORTHO05D007299 2.7e-153 545.8 396 66.9
Atru.chr5.1169 Acer truncatum HOM05D005667 ORTHO05D007299 3.0e-152 542.3 390 67.4
VMungo1383G3519 Vigna mungo HOM05D005667 ORTHO05D007299 6.6e-152 541.2 390 66.9
QL12p026655 Quercus lobata HOM05D005667 ORTHO05D007299 8.7e-152 540.8 391 69.8
Nitab4.5_0002469g0040 Nicotiana tabacum HOM05D005667 ORTHO05D007299 2.5e-151 539.3 391 67.8
vmacro14998 Vaccinium macrocarpon HOM05D005667 ORTHO05D007299 3.3e-151 538.9 388 68.6
Glyma.03G213700 Glycine max HOM05D005667 ORTHO05D007299 5.6e-151 538.1 392 66.1
Thecc.01G298400 Theobroma cacao HOM05D005667 ORTHO05D007299 9.6e-151 537.3 395 70.4
Sopen09g029820 Solanum pennellii HOM05D005667 ORTHO05D007299 4.8e-150 535.0 390 67.4
Lj1g0013419 Lotus japonicus HOM05D005667 ORTHO05D007299 1.1e-149 533.9 394 66.0
Solyc09g075000.3 Solanum lycopersicum HOM05D005667 ORTHO05D007299 2.4e-149 532.7 390 66.7
PGSC0003DMG400011397 Solanum tuberosum HOM05D005667 ORTHO05D007299 2.4e-149 532.7 390 66.7
Phvul.001G206300 Phaseolus vulgaris HOM05D005667 ORTHO05D007299 3.1e-149 532.3 390 66.2
Nn4g25820 Nelumbo nucifera HOM05D005667 ORTHO05D007299 6.9e-149 531.2 385 66.5
CANSAT25G0856 Cannabis sativa HOM05D005667 ORTHO05D007299 1.5e-148 530.0 385 66.8
TPR.G9636 Trifolium pratense HOM05D005667 ORTHO05D007299 1.5e-148 530.0 395 65.8
Ca_09151_v3 Cicer arietinum L. HOM05D005667 ORTHO05D007299 3.4e-148 528.9 397 65.5
Duzib138G1280 Durio zibethinus HOM05D005667 ORTHO05D007299 3.4e-148 528.9 387 70.3
Eucgr.K03468 Eucalyptus grandis HOM05D005667 ORTHO05D007299 5.8e-148 528.1 377 71.4
Glyma.19G210500 Glycine max HOM05D005667 ORTHO05D007299 5.8e-148 528.1 392 65.1
Haze_04910 Corylus avellana HOM05D005667 ORTHO05D007299 7.6e-148 527.7 422 63.7
Psat3g021960 Pisum sativum HOM05D005667 ORTHO05D007299 9.9e-148 527.3 398 65.1
arahy.Tifrunner.gnm1.ann1.P0XQ2X Arachis hypogaea HOM05D005667 ORTHO05D007299 1.7e-147 526.6 393 65.4
Hund18138 Selenicereus undatus HOM05D005667 ORTHO05D007299 2.9e-147 525.8 394 64.7
FvH4_2g25530 Fragaria vesca HOM05D005667 ORTHO05D007299 9.3e-146 520.8 393 65.4
Medtr7g108870 Medicago truncatula HOM05D005667 ORTHO05D007299 2.1e-145 519.6 381 65.6
Medtr8g058590 Medicago truncatula HOM05D005667 ORTHO05D007299 2.1e-145 519.6 381 65.6
DCAR_005798 Daucus carota HOM05D005667 ORTHO05D007299 2.7e-145 519.2 386 66.3
arahy.Tifrunner.gnm1.ann1.AQSE8X Arachis hypogaea HOM05D005667 ORTHO05D007299 1.0e-144 517.3 393 64.6
Aqoxy2G02973 Aquilegia oxysepala HOM05D005667 ORTHO05D007299 2.3e-144 516.2 378 70.1
Potri.014G130600 Populus trichocarpa HOM05D005667 ORTHO05D007299 2.3e-144 516.2 390 71.0
Potri.002G205600 Populus trichocarpa HOM05D005667 ORTHO05D007299 2.5e-143 512.7 393 69.5
Lalb_Chr18g0047071 Lupinus albus HOM05D005667 ORTHO05D007299 5.6e-143 511.5 394 64.5
Lalb_Chr04g0259821 Lupinus albus HOM05D005667 ORTHO05D007299 7.4e-143 511.1 387 65.4
TWI23G0451 Tripterygium wilfordii HOM05D005667 ORTHO05D007299 2.1e-142 509.6 387 65.1
Ciclev10020175m.g Citrus clementina HOM05D005667 ORTHO05D007299 4.8e-142 508.4 443 57.8
Manes.01G217700 Manihot esculenta HOM05D005667 ORTHO05D007299 1.1e-141 507.3 383 65.0
MELO3C017966.2 Cucumis melo HOM05D005667 ORTHO05D007299 2.4e-141 506.1 392 62.2
unitig_0.g1174 Utricularia gibba HOM05D005667 ORTHO05D007299 6.9e-141 504.6 425 65.6
Nitab4.5_0005515g0060 Nicotiana tabacum HOM05D005667 ORTHO05D007299 2.6e-140 502.7 391 65.0
Sed0014922 Sechium edule HOM05D005667 ORTHO05D007299 4.5e-140 501.9 393 61.8
CsaV3_4G000700 Cucumis sativus L. HOM05D005667 ORTHO05D007299 5.8e-140 501.5 392 61.5
TWI59G1070 Tripterygium wilfordii HOM05D005667 ORTHO05D007299 9.9e-140 500.7 393 63.1
HanXRQChr04g0118041 Helianthus annuus HOM05D005667 ORTHO05D007299 6.4e-139 498.0 392 63.5
AT2G47790 Arabidopsis thaliana HOM05D005667 ORTHO05D007299 5.5e-138 495.0 395 63.8
Cc01_g20730 Coffea canephora HOM05D005667 ORTHO05D007299 9.3e-138 494.2 443 57.1
FAN20G0834 Fragaria x ananassa HOM05D005667 ORTHO05D007299 1.6e-137 493.4 393 62.3
CARHR143160 Cardamine hirsuta HOM05D005667 ORTHO05D007299 1.3e-136 490.3 396 66.2
Sp4g29720 Schrenkiella parvula HOM05D005667 ORTHO05D007299 2.3e-136 489.6 396 62.9
Lsat_1_v5_gn_8_53441 Lactuca sativa HOM05D005667 ORTHO05D007299 3.9e-136 488.8 402 64.7
GSVIVG01027987001 Vitis vinifera HOM05D005667 ORTHO05D007299 3.9e-136 488.8 340 69.4
Gohir.D12G135100 Gossypium hirsutum HOM05D005667 ORTHO05D007299 5.1e-136 488.4 388 69.1
Sabra14G0097200 Salix brachista HOM05D005667 ORTHO05D007299 8.7e-136 487.6 386 69.7
Sabra02G0153700 Salix brachista HOM05D005667 ORTHO05D007299 1.9e-135 486.5 420 61.0
AL4G47370 Arabidopsis lyrata HOM05D005667 ORTHO05D007299 3.3e-135 485.7 392 62.8
PSO210G4429 Papaver somniferum HOM05D005667 ORTHO05D007299 9.6e-135 484.2 393 66.2
Prupe.8G259400 Prunus persica HOM05D005667 ORTHO05D007299 9.6e-135 484.2 341 67.4
PSO170G6061 Papaver somniferum HOM05D005667 ORTHO05D007299 2.1e-134 483.0 393 67.2
Sc05g0004030 Simmondsia chinensis HOM05D005667 ORTHO05D007299 6.2e-134 481.5 388 61.9
CDE08G0318 Ceratophyllum demersum HOM05D005667 ORTHO05D007299 1.1e-133 480.7 382 61.8
Thhalv10001494m.g Eutrema salsugineum HOM05D005667 ORTHO05D007299 1.4e-133 480.3 392 64.5
Ah.08g213150 Amaranthus hybridus HOM05D005667 ORTHO05D007299 1.8e-133 479.9 391 59.6
THA.LOC104817511 Tarenaya hassleriana HOM05D005667 ORTHO05D007299 1.8e-133 479.9 397 61.5
Gohir.A12G131200 Gossypium hirsutum HOM05D005667 ORTHO05D007299 5.3e-133 478.4 388 67.5
Carub.0004s3050 Capsella rubella HOM05D005667 ORTHO05D007299 1.5e-132 476.9 393 61.8
PGR044G1684 Punica granatum HOM05D005667 ORTHO05D007299 5.8e-132 474.9 396 64.9
Lj1C26T7 Lonicera japonica HOM05D005667 ORTHO05D007299 1.0e-131 474.2 329 70.2
Aa31LG1G29130 Aethionema arabicum HOM05D005667 ORTHO05D007299 1.3e-131 473.8 399 63.4
Peaxi162Scf00001g00492 Petunia axillaris HOM05D005667 ORTHO05D007299 1.3e-131 473.8 344 66.9
Gorai.008G146100 Gossypium raimondii HOM05D005667 ORTHO05D007299 3.8e-131 472.2 388 67.8
HPP92_027132 Vanilla planifolia HOM05D005667 ORTHO05D007299 8.4e-131 471.1 368 64.1
AUR62033112 Chenopodium quinoa HOM05D005667 ORTHO05D007299 2.5e-130 469.5 384 58.3
ATR0796G332 Amborella trichopoda HOM05D005667 ORTHO05D007299 4.2e-130 468.8 386 60.4
AUR62008656 Chenopodium quinoa HOM05D005667 ORTHO05D007299 3.5e-129 465.7 391 57.8
EL10Ac7g17451 Beta vulgaris HOM05D005667 ORTHO05D007299 4.3e-127 458.8 391 58.3
Hma1.2p1_0209F.1_g088500 Hydrangea macrophylla HOM05D005667 ORTHO05D007299 5.7e-127 458.4 427 58.3
BcaB06g29498 Brassica carinata HOM05D005667 ORTHO05D007299 2.2e-126 456.4 408 60.5
C04p72980 Brassica napus HOM05D005667 ORTHO05D007299 9.0e-125 451.1 389 63.5
BolC4t28779H Brassica oleracea HOM05D005667 ORTHO05D007299 4.5e-124 448.7 389 63.2
Rhsim01G0284200 Rhododendron simsii HOM05D005667 ORTHO05D007299 1.0e-123 447.6 390 60.5
A04p35070 Brassica napus HOM05D005667 ORTHO05D007299 5.0e-123 445.3 385 63.1
ClCG10G010830 Citrullus lanatus HOM05D005667 ORTHO05D007299 1.9e-122 443.4 387 57.9
BraA04t18943Z Brassica rapa HOM05D005667 ORTHO05D007299 5.5e-122 441.8 386 63.0
Actinidia24829 Actinidia chinensis HOM05D005667 ORTHO05D007299 6.3e-118 428.3 387 58.1
ECA236G1571 Erigeron canadensis HOM05D005667 ORTHO05D007299 8.2e-118 427.9 340 66.5
CSS0024566 Camellia sinensis var. sinensis HOM05D005667 ORTHO05D007299 1.1e-117 427.6 389 57.1
CSS0050073 Camellia sinensis var. sinensis HOM05D005667 ORTHO05D007299 4.1e-117 425.6 389 56.8
BcaC02g06992 Brassica carinata HOM05D005667 ORTHO05D007299 6.9e-117 424.9 388 57.7
SHI15190 Sapria himalayana HOM05D005667 ORTHO05D007299 1.7e-107 393.7 402 52.7
Dinv19706 Davidia involucrata HOM05D005667 ORTHO05D007299 1.2e-105 387.5 263 75.7
SEGI_23788 Sequoiadendron giganteum HOM05D005667 ORTHO05D007299 2.1e-105 386.7 382 51.8
Sc05g0001380 Simmondsia chinensis HOM05D005667 ORTHO05D007299 1.1e-98 364.4 301 58.8
Cpa.g.sc9.222 Carica papaya HOM05D005667 ORTHO05D007299 1.5e-98 364.0 273 70.7
Pp3c11_14960 Physcomitrium patens HOM05D005667 ORTHO05D007299 3.4e-87 326.2 382 51.3
Medtr8g058557 Medicago truncatula HOM05D005667 ORTHO05D007299 2.2e-86 323.6 229 68.6
Pp3c2_26100 Physcomitrium patens HOM05D005667 ORTHO05D007299 1.1e-85 321.2 377 51.2
SMO329G0065 Selaginella moellendorffii HOM05D005667 ORTHO05D007299 4.2e-82 309.3 348 51.7
Mapoly0153s0027 Marchantia polymorpha HOM05D005667 ORTHO05D007299 1.2e-79 301.2 381 42.8
RcHm_v2.0_Chr6g0293741 Rosa chinensis HOM05D005667 ORTHO05D007299 3.1e-77 293.1 200 69.5
HPP92_021590 Vanilla planifolia HOM05D005667 ORTHO05D007299 1.1e-74 284.6 259 58.7
BcaB06g29495 Brassica carinata HOM05D005667 ORTHO05D007299 3.3e-74 283.1 286 53.5
Nn3g21456 Nelumbo nucifera HOM05D005667 ORTHO05D007299 2.8e-65 253.4 316 44.9
Pp3c11_15090 Physcomitrium patens HOM05D005667 ORTHO05D007299 1.5e-63 247.7 298 44.6
Oeu011452.2 Olea europaea HOM05D005667 ORTHO05D007299 4.0e-56 223.0 173 67.1
Zm00001eb157470 Zea mays HOM05D005667 ORTHO05D007299 6.8e-56 222.2 203 53.7
Actinidia21054 Actinidia chinensis HOM05D005667 ORTHO05D007299 1.9e-53 214.2 152 63.2
Os12g0294100 Oryza sativa ssp. japonica HOM05D005667 ORTHO05D007299 1.0e-51 208.4 188 66.5
AagrBONN_evm.TU.Sc2ySwM_344.2785 Anthoceros agrestis HOM05D005667 ORTHO05D007299 5.1e-51 206.1 233 46.8
RcHm_v2.0_Chr6g0293751 Rosa chinensis HOM05D005667 ORTHO05D007299 3.5e-44 183.3 138 69.6
Cre03.g178050 Chlamydomonas reinhardtii HOM05D005667 ORTHO05D007299 9.6e-42 175.3 359 34.0
BcaC02g06993 Brassica carinata HOM05D005667 ORTHO05D007299 8.4e-38 162.2 121 66.1
MCO09G319 Micromonas commoda HOM05D005667 ORTHO05D007299 5.8e-31 139.4 343 32.7
PRCOL_00003266 Prasinoderma coloniale HOM05D005667 ORTHO05D007299 2.8e-25 120.6 330 29.7
Migut.G00109 Erythranthe guttata HOM05D005667 ORTHO05D007299 3.5e-20 103.6 66 75.8
Migut.D00125 Erythranthe guttata HOM05D005667 ORTHO05D007299 9.6e-18 95.5 175 39.4
CBR_g34279 Chara braunii HOM05D005667 ORTHO05D007299 1.6e-17 94.7 160 35.6
CBR_g31107 Chara braunii HOM05D000019 ORTHO05D000048 2.6e-15 87.4 185 33.0
CBR_g31109 Chara braunii HOM05D000019 ORTHO05D000048 2.1e-12 77.8 69 49.3
Actinidia13473 Actinidia chinensis HOM05D005667 ORTHO05D000474 1.8e-11 74.7 70 55.7
Prupe.8G259600 Prunus persica HOM05D005667 ORTHO05D007299 2.0e-07 61.2 46 71.7


User provided reference genes

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