Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.21619 Avicennia marina HOM05D003866 ORTHO05D004508 4.2e-57 224.6 119 100.0
Migut.I00105 Erythranthe guttata HOM05D003866 ORTHO05D004508 2.9e-34 148.7 86 82.6
MSTRG.18171 Avicennia marina HOM05D003866 ORTHO05D004508 3.8e-34 148.3 85 84.7
Oeu024509.1 Olea europaea HOM05D003866 ORTHO05D004508 8.4e-34 147.1 85 84.7
TWI14G1088 Tripterygium wilfordii HOM05D003866 ORTHO05D004508 5.5e-33 144.4 91 78.0
Cc01_g20600 Coffea canephora HOM05D003866 ORTHO05D004508 7.1e-33 144.1 85 78.8
SalBow2G1869 Salvia bowleyana HOM05D003866 ORTHO05D004508 7.1e-33 144.1 86 79.1
Cc01_g06400 Coffea canephora HOM05D003866 ORTHO05D004508 9.3e-33 143.7 85 80.0
Nitab4.5_0004737g0020 Nicotiana tabacum HOM05D003866 ORTHO05D004508 2.1e-32 142.5 85 80.0
CAN.G337.118 Capsicum annuum HOM05D003866 ORTHO05D004508 2.7e-32 142.1 85 80.0
Cpa.g.sc11.50 Carica papaya HOM05D003866 ORTHO05D004508 4.6e-32 141.4 91 76.9
Peaxi162Scf00140g01011 Petunia axillaris HOM05D003866 ORTHO05D004508 4.6e-32 141.4 90 74.4
GSVIVG01027965001 Vitis vinifera HOM05D003866 ORTHO05D004508 1.0e-31 140.2 91 78.0
Manes.12G006300 Manihot esculenta HOM05D003866 ORTHO05D004508 1.3e-31 139.8 89 74.2
Sabra10G0159700 Salix brachista HOM05D003866 ORTHO05D002218 1.8e-31 139.4 84 79.8
unitig_8.g3710 Utricularia gibba HOM05D003866 ORTHO05D004508 1.8e-31 139.4 85 77.6
PGSC0003DMG400027790 Solanum tuberosum HOM05D003866 ORTHO05D004508 2.3e-31 139.0 85 77.6
Eucgr.K03458 Eucalyptus grandis HOM05D003866 ORTHO05D004508 3.9e-31 138.3 90 74.4
Atru.chr5.1203 Acer truncatum HOM05D003866 ORTHO05D004508 5.1e-31 137.9 90 74.4
Lsat_1_v5_gn_8_54720 Lactuca sativa HOM05D003866 ORTHO05D004508 5.1e-31 137.9 86 75.6
SGA_v2.0_scaffold1G00383 Striga asiatica HOM05D003866 ORTHO05D004508 5.1e-31 137.9 85 75.3
TAR636G2430 Trochodendron aralioides HOM05D003866 ORTHO05D004508 5.1e-31 137.9 91 75.8
Nitab4.5_0000051g0210 Nicotiana tabacum HOM05D003866 ORTHO05D004508 6.7e-31 137.5 85 77.6
ClCG10G010790 Citrullus lanatus HOM05D003866 ORTHO05D004508 8.7e-31 137.1 85 76.5
ECA236G1731 Erigeron canadensis HOM05D003866 ORTHO05D004508 8.7e-31 137.1 91 71.4
Solyc11g013460.2 Solanum lycopersicum HOM05D003866 ORTHO05D004508 8.7e-31 137.1 85 76.5
Sopen11g008460 Solanum pennellii HOM05D003866 ORTHO05D004508 8.7e-31 137.1 85 76.5
PGSC0003DMG400027789 Solanum tuberosum HOM05D003866 ORTHO05D004508 8.7e-31 137.1 85 76.5
MD11G1303900 Malus domestica HOM05D003866 ORTHO05D004508 1.1e-30 136.7 90 74.4
Cfa005958 Carpinus fangiana HOM05D003866 ORTHO05D004508 1.9e-30 136.0 91 75.8
Ciclev10022066m.g Citrus clementina HOM05D003866 ORTHO05D004508 1.9e-30 136.0 90 71.1
Haze_04883 Corylus avellana HOM05D003866 ORTHO05D004508 1.9e-30 136.0 91 75.8
Dinv19723 Davidia involucrata HOM05D003866 ORTHO05D004508 1.9e-30 136.0 84 78.6
Dinv33030 Davidia involucrata HOM05D003866 ORTHO05D004508 1.9e-30 136.0 91 74.7
Lj1A33G82 Lonicera japonica HOM05D003866 ORTHO05D004508 1.9e-30 136.0 91 74.7
Lj1C0G2 Lonicera japonica HOM05D003866 ORTHO05D004508 1.9e-30 136.0 91 74.7
vmacro02471 Vaccinium macrocarpon HOM05D003866 ORTHO05D004508 1.9e-30 136.0 91 73.6
Potri.010G206900 Populus trichocarpa HOM05D003866 ORTHO05D004508 2.5e-30 135.6 90 74.4
HanXRQChr06g0163901 Helianthus annuus HOM05D003866 ORTHO05D004508 3.3e-30 135.2 91 70.3
MD03G1282400 Malus domestica HOM05D003866 ORTHO05D004508 3.3e-30 135.2 90 72.2
CSS0038127 Camellia sinensis var. sinensis HOM05D003866 ORTHO05D004508 4.3e-30 134.8 91 72.5
CANSAT25G0267 Cannabis sativa HOM05D003866 ORTHO05D004508 4.3e-30 134.8 91 72.5
CANSAT25G2840 Cannabis sativa HOM05D003866 ORTHO05D004508 4.3e-30 134.8 91 72.5
Manes.13G006100 Manihot esculenta HOM05D003866 ORTHO05D004508 4.3e-30 134.8 90 72.2
Glyma.19G209400 Glycine max HOM05D003866 ORTHO05D004508 5.7e-30 134.4 93 72.0
CsaV3_4G000530 Cucumis sativus L. HOM05D003866 ORTHO05D004508 7.4e-30 134.0 85 75.3
Prupe.8G257100 Prunus persica HOM05D003866 ORTHO05D004508 7.4e-30 134.0 90 74.4
Rhsim13G0013000 Rhododendron simsii HOM05D003866 ORTHO05D004508 1.3e-29 133.3 91 73.6
Nn4g25882 Nelumbo nucifera HOM05D003866 ORTHO05D004508 1.6e-29 132.9 90 72.2
RcHm_v2.0_Chr6g0293371 Rosa chinensis HOM05D003866 ORTHO05D004508 1.6e-29 132.9 89 73.0
COL.COLO4_23391 Corchorus olitorius HOM05D003866 ORTHO05D004508 2.1e-29 132.5 90 71.1
Lj2A1190T61 Lonicera japonica HOM05D003866 ORTHO05D004508 2.1e-29 132.5 85 76.5
Sc03g0003200 Simmondsia chinensis HOM05D006805 ORTHO05D004508 2.1e-29 132.5 85 75.3
DCAR_024209 Daucus carota HOM05D003866 ORTHO05D004508 2.8e-29 132.1 92 67.4
Gohir.D04G003400 Gossypium hirsutum HOM05D003866 ORTHO05D004508 2.8e-29 132.1 90 71.1
Gorai.012G004500 Gossypium raimondii HOM05D003866 ORTHO05D004508 2.8e-29 132.1 90 71.1
RcHm_v2.0_Chr5g0006471 Rosa chinensis HOM05D003866 ORTHO05D004508 2.8e-29 132.1 89 71.9
arahy.Tifrunner.gnm1.ann1.44W6WI Arachis hypogaea HOM05D003866 ORTHO05D004508 3.7e-29 131.7 91 74.7
PGR031G3621 Punica granatum HOM05D003866 ORTHO05D004508 3.7e-29 131.7 85 71.8
Gorai.008G010300 Gossypium raimondii HOM05D003866 ORTHO05D004508 4.8e-29 131.3 90 70.0
Sed0016300 Sechium edule HOM05D003866 ORTHO05D004508 4.8e-29 131.3 85 74.1
CiPaw.08G097800 Carya illinoinensis HOM05D003866 ORTHO05D004508 6.2e-29 131.0 91 72.5
FAN15G0670 Fragaria x ananassa HOM05D003866 ORTHO05D004508 6.2e-29 131.0 90 72.2
Lalb_Chr04g0259781 Lupinus albus HOM05D003866 ORTHO05D004508 6.2e-29 131.0 90 73.3
CSS0036127 Camellia sinensis var. sinensis HOM05D003866 ORTHO05D004508 8.2e-29 130.6 91 70.3
FAN11G1587 Fragaria x ananassa HOM05D003866 ORTHO05D004508 8.2e-29 130.6 90 72.2
HanXRQChr04g0118161 Helianthus annuus HOM05D003866 ORTHO05D004508 8.2e-29 130.6 91 70.3
Zm00001eb041190 Zea mays HOM05D003866 ORTHO05D004508 8.2e-29 130.6 83 71.1
Aqoxy5G00709 Aquilegia oxysepala HOM05D003866 ORTHO05D004508 1.1e-28 130.2 91 72.5
Duzib133G0502 Durio zibethinus HOM05D003866 ORTHO05D004508 1.4e-28 129.8 90 68.9
Gohir.D12G010300 Gossypium hirsutum HOM05D003866 ORTHO05D004508 1.4e-28 129.8 90 68.9
RhsimUnG0168700 Rhododendron simsii HOM05D003866 ORTHO05D004508 1.4e-28 129.8 91 72.5
Actinidia32233 Actinidia chinensis HOM05D003866 ORTHO05D004508 1.8e-28 129.4 90 73.3
EL10Ac4g07959 Beta vulgaris HOM05D003866 ORTHO05D004508 1.8e-28 129.4 90 71.1
Glyma.03G212300 Glycine max HOM05D003866 ORTHO05D004508 1.8e-28 129.4 85 74.1
Lj1g0017340 Lotus japonicus HOM05D003866 ORTHO05D004508 1.8e-28 129.4 91 71.4
Phvul.001G205200 Phaseolus vulgaris HOM05D003866 ORTHO05D004508 1.8e-28 129.4 85 74.1
Sc03g0003210 Simmondsia chinensis HOM05D003866 ORTHO05D004508 1.8e-28 129.4 85 74.1
TAR365G0487 Trochodendron aralioides HOM05D003866 ORTHO05D004508 1.8e-28 129.4 90 72.2
TAR365G0990 Trochodendron aralioides HOM05D003866 ORTHO05D004508 1.8e-28 129.4 90 72.2
Ca_09142_v3 Cicer arietinum L. HOM05D003866 ORTHO05D004508 3.1e-28 128.6 91 69.2
FvH4_2g25231 Fragaria vesca HOM05D003866 ORTHO05D004508 3.1e-28 128.6 90 71.1
FAN24G3471 Fragaria x ananassa HOM05D003866 ORTHO05D004508 3.1e-28 128.6 90 71.1
Gohir.A12G010200 Gossypium hirsutum HOM05D003866 ORTHO05D004508 3.1e-28 128.6 84 70.2
MBI19_g41921_MAGBIO Magnolia biondii HOM05D003866 ORTHO05D004508 3.1e-28 128.6 89 69.7
Medtr2g014120 Medicago truncatula HOM05D003866 ORTHO05D004508 3.1e-28 128.6 91 70.3
Medtr7g108540 Medicago truncatula HOM05D003866 ORTHO05D004508 3.1e-28 128.6 91 70.3
Hund18126 Selenicereus undatus HOM05D003866 ORTHO05D004508 4.1e-28 128.3 84 72.6
Thecc.01G295900 Theobroma cacao HOM05D003866 ORTHO05D004508 4.1e-28 128.3 90 67.8
TPR.G9596 Trifolium pratense HOM05D003866 ORTHO05D004508 5.3e-28 127.9 91 70.3
Zm00001eb341290 Zea mays HOM05D003866 ORTHO05D004508 5.3e-28 127.9 83 69.9
EL10Ac1g00209 Beta vulgaris HOM05D003866 ORTHO05D004508 6.9e-28 127.5 90 70.0
Sabra08G0038800 Salix brachista HOM05D003866 ORTHO05D004508 9.0e-28 127.1 84 73.8
FvH4_3g05411 Fragaria vesca HOM05D003866 ORTHO05D004508 1.2e-27 126.7 90 70.0
SHI02446 Sapria himalayana HOM05D003866 ORTHO05D004508 1.2e-27 126.7 90 68.9
FvH4_7g06070 Fragaria vesca HOM05D003866 ORTHO05D004508 1.5e-27 126.3 90 70.0
VMungo1383G2803 Vigna mungo HOM05D003866 ORTHO05D004508 1.5e-27 126.3 94 69.1
arahy.Tifrunner.gnm1.ann1.9DBC1D Arachis hypogaea HOM05D003866 ORTHO05D004508 2.6e-27 125.6 90 72.2
Gohir.A05G412600 Gossypium hirsutum HOM05D003866 ORTHO05D004508 3.4e-27 125.2 90 68.9
Psat3g022720 Pisum sativum HOM05D003866 ORTHO05D004508 3.4e-27 125.2 91 69.2
Hund18125 Selenicereus undatus HOM05D003866 ORTHO05D004508 4.5e-27 124.8 84 71.4
arahy.Tifrunner.gnm1.ann1.AT77GA Arachis hypogaea HOM05D003866 ORTHO05D004508 5.8e-27 124.4 90 71.1
AUR62022186 Chenopodium quinoa HOM05D003866 ORTHO05D004508 5.8e-27 124.4 84 71.4
AUR62031891 Chenopodium quinoa HOM05D003866 ORTHO05D004508 5.8e-27 124.4 84 71.4
Os01g0360600 Oryza sativa ssp. japonica HOM05D003866 ORTHO05D004508 5.8e-27 124.4 89 65.2
Actinidia24328 Actinidia chinensis HOM05D003866 ORTHO05D004508 7.6e-27 124.0 90 70.0
A03p26580 Brassica napus HOM05D003866 ORTHO05D004508 7.6e-27 124.0 92 65.2
Prupe.6G179600 Prunus persica HOM05D003866 ORTHO05D004508 7.6e-27 124.0 90 66.7
RcHm_v2.0_Chr7g0221651 Rosa chinensis HOM05D003866 ORTHO05D004508 7.6e-27 124.0 90 67.8
Sp4g10360 Schrenkiella parvula HOM05D003866 ORTHO05D004508 1.3e-26 123.2 91 64.8
Aa31LG5G8830 Aethionema arabicum HOM05D003866 ORTHO05D004508 2.9e-26 122.1 85 67.1
ATR0706G042 Amborella trichopoda HOM05D003866 ORTHO05D004508 2.9e-26 122.1 83 72.3
FAN27G2002 Fragaria x ananassa HOM05D003866 ORTHO05D004508 2.9e-26 122.1 90 68.9
SEGI_05441 Sequoiadendron giganteum HOM05D003866 ORTHO05D004508 3.8e-26 121.7 88 70.5
PSO210G0692 Papaver somniferum HOM05D003866 ORTHO05D004508 6.5e-26 120.9 81 72.8
PSO832G2724 Papaver somniferum HOM05D003866 ORTHO05D004508 8.4e-26 120.6 81 72.8
Thhalv10017203m.g Eutrema salsugineum HOM05D003866 ORTHO05D004508 1.1e-25 120.2 91 63.7
BcaB01g03075 Brassica carinata HOM05D003866 ORTHO05D004508 1.4e-25 119.8 91 63.7
RcHm_v2.0_Chr1g0333581 Rosa chinensis HOM05D003866 ORTHO05D004508 1.4e-25 119.8 90 65.6
SGA_v2.0_scaffold25G10945 Striga asiatica HOM05D003866 ORTHO05D004508 1.4e-25 119.8 76 75.0
BolC3t15527H Brassica oleracea HOM05D003866 ORTHO05D004508 3.2e-25 118.6 91 62.6
Carub.0004s0812 Capsella rubella HOM05D003866 ORTHO05D004508 3.2e-25 118.6 85 64.7
BcaC01g04944 Brassica carinata HOM05D003866 ORTHO05D004508 4.2e-25 118.2 91 62.6
C03p31840 Brassica napus HOM05D003866 ORTHO05D004508 5.5e-25 117.9 91 61.5
BraA03t11870Z Brassica rapa HOM05D003866 ORTHO05D004508 5.5e-25 117.9 91 62.6
AT2G27490 Arabidopsis thaliana HOM05D003866 ORTHO05D004508 1.2e-24 116.7 91 61.5
A07p18280 Brassica napus HOM05D003866 ORTHO05D004508 1.6e-24 116.3 91 61.5
Psat5g098240 Pisum sativum HOM05D001063 ORTHO05D000986 1.6e-24 116.3 93 62.4
AL4G21480 Arabidopsis lyrata HOM05D003866 ORTHO05D004508 4.6e-24 114.8 91 60.4
BcaC02g10889 Brassica carinata HOM05D003866 ORTHO05D004508 7.9e-24 114.0 91 60.4
CARHR120140 Cardamine hirsuta HOM05D003866 ORTHO05D004508 1.3e-23 113.2 91 60.4
BcaB02g10095 Brassica carinata HOM05D003866 ORTHO05D004508 1.8e-23 112.8 91 59.3
CDE09G0414 Ceratophyllum demersum HOM05D003866 ORTHO05D004508 1.8e-23 112.8 83 65.1
Thhalv10017190m.g Eutrema salsugineum HOM05D003866 ORTHO05D004508 2.3e-23 112.5 91 59.3
Sp4g10280 Schrenkiella parvula HOM05D003866 ORTHO05D004508 3.9e-23 111.7 91 60.4
GSVIVG01010954001 Vitis vinifera HOM05D003866 ORTHO05D004508 6.7e-23 110.9 78 71.8
SMO144G0118 Selaginella moellendorffii HOM05D003866 ORTHO05D004508 1.1e-20 103.6 82 58.5
Pp3c2_13260 Physcomitrium patens HOM05D003866 ORTHO05D004508 1.8e-20 102.8 84 54.8
QL12p026975 Quercus lobata HOM05D003866 ORTHO05D004508 3.1e-20 102.1 64 76.6
arahy.Tifrunner.gnm1.ann1.86SF76 Arachis hypogaea HOM05D003866 ORTHO05D004508 1.2e-19 100.1 89 58.4
Mapoly0028s0053 Marchantia polymorpha HOM05D003866 ORTHO05D004508 1.0e-18 97.1 84 58.3
FAN10G2101 Fragaria x ananassa HOM05D003866 ORTHO05D004508 1.4e-17 93.2 90 57.8
AagrBONN_evm.TU.Sc2ySwM_228.2237 Anthoceros agrestis HOM05D003866 ORTHO05D004508 2.5e-17 92.4 83 53.0
DCAR_024210 Daucus carota HOM05D003866 ORTHO05D004508 2.5e-17 92.4 61 68.9
arahy.Tifrunner.gnm1.ann1.TVUZ4W Arachis hypogaea HOM05D003866 ORTHO05D004508 9.4e-17 90.5 77 61.0
CBR_g9110 Chara braunii HOM05D003958 ORTHO05D004864 9.4e-17 90.5 90 55.6
RcHm_v2.0_Chr1g0334201 Rosa chinensis HOM05D003866 ORTHO05D004508 3.9e-15 85.1 58 69.0
arahy.Tifrunner.gnm1.ann1.VNWS1A Arachis hypogaea HOM05D003866 ORTHO05D004508 6.7e-15 84.3 64 67.2
CAN.G255.7 Capsicum annuum HOM05D003866 ORTHO05D004508 5.7e-14 81.3 59 71.2
Cre10.g436150 Chlamydomonas reinhardtii HOM05D003866 ORTHO05D004508 5.7e-14 81.3 82 48.8
MD12G1063200 Malus domestica HOM05D003866 ORTHO05D004508 1.7e-13 79.7 44 75.0
Nn4g25856 Nelumbo nucifera HOM05D003866 ORTHO05D004508 1.7e-13 79.7 50 72.0
RcHm_v2.0_Chr1g0333491 Rosa chinensis HOM05D003866 ORTHO05D004508 2.8e-13 79.0 53 66.0
RcHm_v2.0_Chr6g0258301 Rosa chinensis HOM05D003866 ORTHO05D004508 8.2e-13 77.4 47 72.3
FAN25G0878 Fragaria x ananassa HOM05D003866 ORTHO05D004508 5.3e-12 74.7 50 66.0
Carub.0001s3498 Capsella rubella HOM05D003866 ORTHO05D004508 2.6e-11 72.4 70 51.4
arahy.Tifrunner.gnm1.ann1.ZE4P1V Arachis hypogaea HOM05D003866 ORTHO05D004508 1.7e-10 69.7 53 67.9
MD14G1128400 Malus domestica HOM05D003866 ORTHO05D004508 3.2e-09 65.5 37 81.1
AL8G17300 Arabidopsis lyrata HOM05D003866 ORTHO05D004508 2.7e-08 62.4 91 41.8
Potri.008G053601 Populus trichocarpa HOM05D003866 ORTHO05D004508 1.8e-07 59.7 39 69.2


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