Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.21461 Avicennia marina HOM05D007706 ORTHO05D009593 1.4e-60 236.1 117 100.0
Peaxi162Scf00043g02924 Petunia axillaris HOM05D007706 ORTHO05D009593 2.7e-16 89.0 77 61.0
MSTRG.18353 Avicennia marina HOM05D007706 ORTHO05D009593 1.3e-15 86.7 99 57.6
Solyc09g064630.3 Solanum lycopersicum HOM05D007706 ORTHO05D009593 1.1e-14 83.6 77 57.1
Sopen09g025790 Solanum pennellii HOM05D007706 ORTHO05D009593 1.9e-14 82.8 77 57.1
Sopen12g010960 Solanum pennellii HOM05D000004 ORTHO05D009593 5.6e-14 81.3 77 55.8
PGSC0003DMG400008584 Solanum tuberosum HOM05D007706 ORTHO05D009593 9.5e-14 80.5 77 55.8
Nitab4.5_0000845g0230 Nicotiana tabacum HOM05D007706 ORTHO05D009593 4.7e-13 78.2 78 57.7
Cc01_g17810 Coffea canephora HOM05D007706 ORTHO05D009593 8.1e-13 77.4 79 58.2
Oeu026810.1 Olea europaea HOM05D007706 ORTHO05D009593 8.1e-13 77.4 82 58.5
SalBow4G1824 Salvia bowleyana HOM05D007706 ORTHO05D009593 1.1e-12 77.0 77 54.5
Migut.D00475 Erythranthe guttata HOM05D007706 ORTHO05D009593 1.8e-12 76.3 78 55.1
SGA_v2.0_scaffold1G00652 Striga asiatica HOM05D007706 ORTHO05D009593 2.6e-11 72.4 77 53.2
Dinv16399 Davidia involucrata HOM05D007706 ORTHO05D009593 5.8e-11 71.2 81 50.6
AUR62025443 Chenopodium quinoa HOM05D006910 ORTHO05D008937 1.7e-10 69.7 83 48.2
Migut.N02230 Erythranthe guttata HOM05D007706 ORTHO05D009593 1.7e-10 69.7 76 52.6
EL10Ac7g17683 Beta vulgaris HOM05D007706 ORTHO05D009593 3.7e-10 68.6 82 45.1
Nitab4.5_0007992g0040 Nicotiana tabacum HOM05D007706 ORTHO05D009593 3.7e-10 68.6 80 52.5
TPR.G30860 Trifolium pratense HOM05D003225 ORTHO05D003818 1.9e-09 66.2 80 50.0
CSS0048547 Camellia sinensis var. sinensis HOM05D007706 ORTHO05D009593 9.2e-09 63.9 78 42.3
Ca_08742_v3 Cicer arietinum L. HOM05D007706 ORTHO05D009593 9.2e-09 63.9 77 51.9
Medtr7g098450 Medicago truncatula HOM05D007706 ORTHO05D009593 2.7e-08 62.4 77 51.9
Psat3g051920 Pisum sativum HOM05D007706 ORTHO05D009593 3.5e-08 62.0 77 45.5
TPR.G20053 Trifolium pratense HOM05D007706 ORTHO05D009593 3.5e-08 62.0 78 47.4
ECA236G0985 Erigeron canadensis HOM05D007706 ORTHO05D009593 6.0e-08 61.2 78 48.7
SalBow7G0697 Salvia bowleyana HOM05D007706 ORTHO05D009593 6.0e-08 61.2 80 51.2
Medtr7g099260 Medicago truncatula HOM05D007706 ORTHO05D009593 7.8e-08 60.8 77 45.5
Ca_08762_v3 Cicer arietinum L. HOM05D003225 ORTHO05D009593 1.3e-07 60.1 77 49.4
Ca_30216_v3 Cicer arietinum L. HOM05D003225 ORTHO05D003818 1.3e-07 60.1 77 49.4
FAN27G2030 Fragaria x ananassa HOM05D007706 ORTHO05D009593 2.3e-07 59.3 77 48.1
Hma1.2p1_1930F.1_g307940 Hydrangea macrophylla HOM05D007706 ORTHO05D009593 3.9e-07 58.5 87 43.7
Ah.15g092610 Amaranthus hybridus HOM05D007706 ORTHO05D009593 5.1e-07 58.2 81 42.0
Glyma.19G168300 Glycine max HOM05D007706 ORTHO05D009593 5.1e-07 58.2 77 46.8
Psat3g053960 Pisum sativum HOM05D007706 ORTHO05D009593 5.1e-07 58.2 82 46.3
Duzib138G1124 Durio zibethinus HOM05D007706 ORTHO05D009593 6.6e-07 57.8 79 44.3
HanXRQChr04g0108691 Helianthus annuus HOM05D007706 ORTHO05D009593 8.6e-07 57.4 84 44.0
VMungo1383G0992 Vigna mungo HOM05D007706 ORTHO05D009593 1.9e-06 56.2 77 44.2
Aqoxy5G00146 Aquilegia oxysepala HOM05D007706 ORTHO05D009593 2.5e-06 55.8 78 44.9
Nn3g19784 Nelumbo nucifera HOM05D007706 ORTHO05D009593 2.5e-06 55.8 78 46.2
Cfa002482 Carpinus fangiana HOM05D007706 ORTHO05D009593 3.3e-06 55.5 77 41.6
FAN15G0362 Fragaria x ananassa HOM05D007706 ORTHO05D009593 3.3e-06 55.5 81 44.4
Rhsim02G0044100 Rhododendron simsii HOM05D006910 ORTHO05D008937 3.3e-06 55.5 95 40.0
Dinv34676 Davidia involucrata HOM05D007706 ORTHO05D009593 4.3e-06 55.1 83 44.6
Lj1g0013336 Lotus japonicus HOM05D007706 ORTHO05D009593 5.6e-06 54.7 83 43.4
Phvul.001G164700 Phaseolus vulgaris HOM05D007706 ORTHO05D009593 5.6e-06 54.7 77 44.2
Lalb_Chr20g0113631 Lupinus albus HOM05D007706 ORTHO05D009593 7.3e-06 54.3 77 40.3
Prupe.8G215700 Prunus persica HOM05D007706 ORTHO05D009593 7.3e-06 54.3 79 44.3
arahy.Tifrunner.gnm1.ann1.NJ5037 Arachis hypogaea HOM05D007706 ORTHO05D009593 9.5e-06 53.9 78 43.6


User provided reference genes

Program Settings