Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.21303 Avicennia marina HOM05D004226 ORTHO05D004842 1.6e-78 296.2 166 100.0
MSTRG.18494 Avicennia marina HOM05D004226 ORTHO05D004842 3.2e-63 245.4 166 75.3
Migut.N00664 Erythranthe guttata HOM05D004226 ORTHO05D004842 1.5e-60 236.5 169 71.6
SGA_v2.0_scaffold8G04494 Striga asiatica HOM05D004226 ORTHO05D004842 1.4e-58 229.9 166 80.1
SGA_v2.0_scaffold624G53238 Striga asiatica HOM05D004226 ORTHO05D004842 1.4e-55 219.9 166 77.1
Nitab4.5_0009151g0020 Nicotiana tabacum HOM05D004226 ORTHO05D004842 2.7e-54 215.7 163 73.0
SGA_v2.0_scaffold29G12070 Striga asiatica HOM05D004226 ORTHO05D004842 2.7e-54 215.7 194 67.5
Nitab4.5_0000038g0150 Nicotiana tabacum HOM05D004226 ORTHO05D004842 2.3e-53 212.6 163 71.8
Oeu003656.1 Olea europaea HOM05D004226 ORTHO05D004842 3.0e-53 212.2 163 66.9
Actinidia23795 Actinidia chinensis HOM05D004226 ORTHO05D004842 8.1e-51 204.1 166 63.9
Actinidia30018 Actinidia chinensis HOM05D004226 ORTHO05D004842 2.4e-50 202.6 166 70.5
Dinv28812 Davidia involucrata HOM05D004226 ORTHO05D004842 9.0e-50 200.7 167 64.1
Actinidia34543 Actinidia chinensis HOM05D004226 ORTHO05D004842 7.6e-49 197.6 166 70.5
Lsat_1_v5_gn_8_98041 Lactuca sativa HOM05D004226 ORTHO05D004842 9.9e-49 197.2 171 60.2
Rhsim13G0052600 Rhododendron simsii HOM05D004226 ORTHO05D004842 2.2e-48 196.1 165 67.9
Peaxi162Scf00372g00004 Petunia axillaris HOM05D004226 ORTHO05D004842 2.7e-46 189.1 166 69.3
Dinv10439 Davidia involucrata HOM05D004226 ORTHO05D004842 3.5e-46 188.7 166 60.8
Lj2A1117T18 Lonicera japonica HOM05D004226 ORTHO05D004842 1.0e-45 187.2 166 63.9
Glyma.08G344200 Glycine max HOM05D004226 ORTHO05D004842 3.0e-45 185.7 164 64.6
Duzib138G1045 Durio zibethinus HOM05D004226 ORTHO05D004842 3.9e-45 185.3 164 61.0
Eucgr.H00726 Eucalyptus grandis HOM05D004226 ORTHO05D004842 8.7e-45 184.1 161 58.4
Phvul.008G136900 Phaseolus vulgaris HOM05D004226 ORTHO05D004842 1.1e-44 183.7 164 58.5
vmacro02815 Vaccinium macrocarpon HOM05D004226 ORTHO05D004842 1.1e-44 183.7 160 62.5
Thecc.01G211100 Theobroma cacao HOM05D004226 ORTHO05D004842 1.5e-44 183.3 164 68.3
Haze_03501 Corylus avellana HOM05D004226 ORTHO05D004842 1.9e-44 183.0 167 59.3
Lalb_Chr01g0021991 Lupinus albus HOM05D004226 ORTHO05D004842 2.5e-44 182.6 160 56.9
CANSAT01G0104 Cannabis sativa HOM05D004226 ORTHO05D004842 3.3e-44 182.2 168 65.5
VMungo1383G2422 Vigna mungo HOM05D004226 ORTHO05D004842 4.3e-44 181.8 164 59.1
HanXRQChr08g0231431 Helianthus annuus HOM05D004226 ORTHO05D004842 5.6e-44 181.4 169 58.0
Lalb_Chr03g0041091 Lupinus albus HOM05D004226 ORTHO05D004842 5.6e-44 181.4 158 59.5
Duzib133G0243 Durio zibethinus HOM05D004226 ORTHO05D004842 7.3e-44 181.0 164 62.8
Cfa010569 Carpinus fangiana HOM05D004226 ORTHO05D004842 2.8e-43 179.1 167 58.7
Oeu057834.2 Olea europaea HOM05D000039 ORTHO05D005440 8.1e-43 177.6 144 64.6
DCAR_012646 Daucus carota HOM05D004226 ORTHO05D004842 1.8e-42 176.4 162 55.6
Cc01_g16140 Coffea canephora HOM05D004226 ORTHO05D004842 2.4e-42 176.0 169 59.2
Glyma.18G152900 Glycine max HOM05D004226 ORTHO05D004842 5.3e-42 174.9 164 56.7
Nitab4.5_0002167g0150 Nicotiana tabacum HOM05D004226 ORTHO05D004842 5.3e-42 174.9 163 69.3
PGSC0003DMG400027348 Solanum tuberosum HOM05D004226 ORTHO05D004842 9.0e-42 174.1 163 59.5
CiPaw.13G055300 Carya illinoinensis HOM05D004226 ORTHO05D004842 1.5e-41 173.3 164 54.9
Gohir.A11G142500 Gossypium hirsutum HOM05D004226 ORTHO05D004842 1.5e-41 173.3 166 56.0
HanXRQChr09g0257641 Helianthus annuus HOM05D004226 ORTHO05D004842 1.5e-41 173.3 159 56.6
Gohir.D11G148800 Gossypium hirsutum HOM05D004226 ORTHO05D004842 2.0e-41 172.9 166 56.0
Gorai.007G159600 Gossypium raimondii HOM05D004226 ORTHO05D004842 2.6e-41 172.6 166 54.8
Hma1.2p1_0781F.1_g216920 Hydrangea macrophylla HOM05D004226 ORTHO05D004842 3.4e-41 172.2 172 57.0
Nitab4.5_0002311g0050 Nicotiana tabacum HOM05D004226 ORTHO05D004842 3.4e-41 172.2 165 67.3
TAR362G0792 Trochodendron aralioides HOM05D004226 ORTHO05D004842 3.4e-41 172.2 164 57.9
Lj1g0015941 Lotus japonicus HOM05D004226 ORTHO05D004842 4.5e-41 171.8 165 63.0
TWI36G1598 Tripterygium wilfordii HOM05D004226 ORTHO05D004842 7.6e-41 171.0 165 61.8
TAR365G1191 Trochodendron aralioides HOM05D004226 ORTHO05D004842 7.6e-41 171.0 157 57.3
HanXRQChr16g0507911 Helianthus annuus HOM05D004226 ORTHO05D004842 9.9e-41 170.6 172 55.2
TWI18G1341 Tripterygium wilfordii HOM05D004226 ORTHO05D004842 1.7e-40 169.9 166 60.8
Sopen11g003480 Solanum pennellii HOM05D004226 ORTHO05D004842 2.2e-40 169.5 163 58.3
Sopen06g002500 Solanum pennellii HOM05D004226 ORTHO05D004842 3.8e-40 168.7 163 58.3
ECA236G1737 Erigeron canadensis HOM05D004226 ORTHO05D004842 1.9e-39 166.4 163 54.6
Hund02794 Selenicereus undatus HOM05D004226 ORTHO05D004842 1.9e-39 166.4 164 61.0
Solyc06g007610.2 Solanum lycopersicum HOM05D004226 ORTHO05D004842 3.2e-39 165.6 163 57.7
PGSC0003DMG400020653 Solanum tuberosum HOM05D004226 ORTHO05D004842 4.2e-39 165.2 163 58.9
CSS0019192 Camellia sinensis var. sinensis HOM05D004226 ORTHO05D004842 7.1e-39 164.5 127 64.6
Ciclev10016998m.g Citrus clementina HOM05D004226 ORTHO05D004842 9.3e-39 164.1 166 61.4
PGR083G1064 Punica granatum HOM05D004226 ORTHO05D004842 2.7e-38 162.5 157 54.8
vmacro14692 Vaccinium macrocarpon HOM05D004226 ORTHO05D004842 2.7e-38 162.5 161 63.4
Medtr7g052690 Medicago truncatula HOM05D004226 ORTHO05D004842 1.0e-37 160.6 163 61.3
Aqoxy2G03959 Aquilegia oxysepala HOM05D004226 ORTHO05D004842 1.8e-37 159.8 149 51.7
Nn1g08255 Nelumbo nucifera HOM05D004226 ORTHO05D004842 2.3e-37 159.5 173 49.7
Cpa.g.sc8.73 Carica papaya HOM05D004226 ORTHO05D004842 6.7e-37 157.9 164 50.6
Rhsim01G0248500 Rhododendron simsii HOM05D004226 ORTHO05D004842 1.1e-36 157.1 164 64.0
ECA247G2547 Erigeron canadensis HOM05D004226 ORTHO05D004842 1.9e-36 156.4 145 54.5
Manes.12G054100 Manihot esculenta HOM05D004226 ORTHO05D004842 4.3e-36 155.2 159 54.1
EL10Ac5g10626 Beta vulgaris HOM05D004226 ORTHO05D004842 7.4e-36 154.5 167 54.5
COL.COLO4_26572 Corchorus olitorius HOM05D004226 ORTHO05D004842 9.6e-36 154.1 167 61.1
DCAR_018624 Daucus carota HOM05D004226 ORTHO05D004842 9.6e-36 154.1 165 50.3
Hund09468 Selenicereus undatus HOM05D004226 ORTHO05D004842 2.1e-35 152.9 162 54.3
Migut.D00735 Erythranthe guttata HOM05D004226 ORTHO05D004842 3.7e-35 152.1 160 55.6
TAR633G1997 Trochodendron aralioides HOM05D004226 ORTHO05D004842 6.2e-35 151.4 151 54.3
Psat3g151000 Pisum sativum HOM05D004226 ORTHO05D004842 1.4e-34 150.2 164 53.0
QL09p046251 Quercus lobata HOM05D004226 ORTHO05D004842 1.8e-34 149.8 173 49.1
Migut.D00732 Erythranthe guttata HOM05D004226 ORTHO05D004842 9.0e-34 147.5 161 54.7
CAN.G181.39 Capsicum annuum HOM05D004226 ORTHO05D004842 4.5e-33 145.2 145 66.2
HPP92_024259 Vanilla planifolia HOM05D004226 ORTHO05D004842 1.7e-32 143.3 165 48.5
Potri.002G251200 Populus trichocarpa HOM05D004226 ORTHO05D004842 4.9e-32 141.7 159 52.2
Ah.11g051030 Amaranthus hybridus HOM05D004226 ORTHO05D004842 1.1e-31 140.6 157 51.6
AUR62028700 Chenopodium quinoa HOM05D004226 ORTHO05D004842 2.5e-31 139.4 161 52.8
TPR.G26804 Trifolium pratense HOM05D004226 ORTHO05D004842 3.2e-31 139.0 164 50.6
Gohir.D07G094900 Gossypium hirsutum HOM05D004226 ORTHO05D004842 9.3e-31 137.5 148 52.0
THA.LOC104802646 Tarenaya hassleriana HOM05D004226 ORTHO05D004842 1.6e-30 136.7 168 49.4
AUR62008122 Chenopodium quinoa HOM05D004226 ORTHO05D004842 6.0e-30 134.8 163 50.9
Gohir.A07G090200 Gossypium hirsutum HOM05D004226 ORTHO05D004842 6.0e-30 134.8 148 50.7
Gorai.001G102200 Gossypium raimondii HOM05D004226 ORTHO05D004842 6.0e-30 134.8 148 51.4
ClCG05G015470 Citrullus lanatus HOM05D004226 ORTHO05D004842 1.3e-29 133.7 163 46.6
Sc17g0001670 Simmondsia chinensis HOM05D004226 ORTHO05D004842 3.9e-29 132.1 147 49.0
PSO675G4654 Papaver somniferum HOM05D004226 ORTHO05D004842 6.7e-29 131.3 152 49.3
Sabra02G0191000 Salix brachista HOM05D004226 ORTHO05D004842 2.5e-28 129.4 184 44.0
PSO017G4362 Papaver somniferum HOM05D004226 ORTHO05D004842 5.7e-28 128.3 143 49.0
MELO3C003732.2 Cucumis melo HOM05D004226 ORTHO05D004842 9.6e-28 127.5 138 47.1
DCAR_004767 Daucus carota HOM05D004226 ORTHO05D004842 2.1e-27 126.3 157 47.8
THA.LOC104818997 Tarenaya hassleriana HOM05D004226 ORTHO05D004842 5.3e-26 121.7 165 45.5
THA.LOC104822467 Tarenaya hassleriana HOM05D004226 ORTHO05D004842 6.9e-26 121.3 163 43.6
CsaV3_3G046080 Cucumis sativus L. HOM05D004226 ORTHO05D004842 1.2e-25 120.6 156 42.3
ATR0686G035 Amborella trichopoda HOM05D004226 ORTHO05D004842 3.4e-25 119.0 153 45.1
Sp2g18850 Schrenkiella parvula HOM05D004226 ORTHO05D004842 7.6e-25 117.9 163 44.8
CDE05G1161 Ceratophyllum demersum HOM05D004226 ORTHO05D004842 1.7e-24 116.7 159 42.8
SEGI_00481 Sequoiadendron giganteum HOM05D004226 ORTHO05D004842 1.7e-24 116.7 164 45.1
Duzib168G0485 Durio zibethinus HOM05D004226 ORTHO05D004842 2.9e-24 115.9 142 46.5
Thhalv10005050m.g Eutrema salsugineum HOM05D004226 ORTHO05D004842 6.5e-24 114.8 160 42.5
Aa31sc186G10 Aethionema arabicum HOM05D004226 ORTHO05D004842 1.4e-23 113.6 144 46.5
A06p39150 Brassica napus HOM05D004226 ORTHO05D004842 4.2e-23 112.1 160 43.8
Prupe.8G190400 Prunus persica HOM05D004226 ORTHO05D004842 4.2e-23 112.1 158 45.6
A09p04540 Brassica napus HOM05D004226 ORTHO05D004842 7.1e-23 111.3 161 45.3
C09p04850 Brassica napus HOM05D004226 ORTHO05D004842 7.1e-23 111.3 174 42.5
BraA09t36089Z Brassica rapa HOM05D004226 ORTHO05D004842 7.1e-23 111.3 161 45.3
BcaC03g17654 Brassica carinata HOM05D004226 ORTHO05D004842 9.3e-23 110.9 143 44.8
BolC2t11714H Brassica oleracea HOM05D004226 ORTHO05D004842 1.2e-22 110.5 143 44.1
BolC7t44438H Brassica oleracea HOM05D004226 ORTHO05D004842 1.2e-22 110.5 159 42.8
BolC9t53412H Brassica oleracea HOM05D004226 ORTHO05D004842 1.6e-22 110.2 173 41.6
C02p56560 Brassica napus HOM05D004226 ORTHO05D004842 2.1e-22 109.8 143 44.1
BraA06t26830Z Brassica rapa HOM05D004226 ORTHO05D004842 2.1e-22 109.8 160 42.5
BcaC04g23773 Brassica carinata HOM05D004226 ORTHO05D004842 2.7e-22 109.4 163 41.7
BcaC06g30793 Brassica carinata HOM05D004226 ORTHO05D004842 2.7e-22 109.4 163 42.9
Sed0006210 Sechium edule HOM05D004226 ORTHO05D004842 2.7e-22 109.4 146 43.8
A02p37490 Brassica napus HOM05D004226 ORTHO05D004842 6.1e-22 108.2 143 44.1
BraA02t08736Z Brassica rapa HOM05D004226 ORTHO05D004842 1.8e-21 106.7 143 44.8
Duzib138G0271 Durio zibethinus HOM05D004226 ORTHO05D004842 2.3e-21 106.3 134 45.5
Duzib211G0475 Durio zibethinus HOM05D004226 ORTHO05D004842 2.3e-21 106.3 139 43.9
Duzib205G0826 Durio zibethinus HOM05D004226 ORTHO05D004842 3.9e-21 105.5 154 42.9
C07p39180 Brassica napus HOM05D004226 ORTHO05D004842 5.1e-21 105.1 161 42.2
Lj3g0001126 Lotus japonicus HOM05D004226 ORTHO05D004842 5.1e-21 105.1 141 46.1
Mapoly0001s0501 Marchantia polymorpha HOM05D004226 ORTHO05D004842 1.1e-20 104.0 162 40.7
Ca_07469_v3 Cicer arietinum L. HOM05D004226 ORTHO05D004842 1.9e-20 103.2 91 60.4
Ca_30573_v3 Cicer arietinum L. HOM05D004226 ORTHO05D004842 1.9e-20 103.2 91 60.4
Lj3g0009756 Lotus japonicus HOM05D004226 ORTHO05D004842 1.9e-20 103.2 132 46.2
Duzib170G0075 Durio zibethinus HOM05D004226 ORTHO05D004842 2.5e-20 102.8 141 45.4
Atru.chr6.3547 Acer truncatum HOM05D004226 ORTHO05D004842 7.4e-20 101.3 125 44.0
Carub.0008s0806 Capsella rubella HOM05D004226 ORTHO05D004842 9.7e-20 100.9 148 41.9
CDE05G0628 Ceratophyllum demersum HOM05D004226 ORTHO05D004842 1.3e-19 100.5 119 48.7
SMO146G0354 Selaginella moellendorffii HOM05D004226 ORTHO05D004842 1.3e-19 100.5 130 43.1
SHI10249 Sapria himalayana HOM05D004226 ORTHO05D004842 8.2e-19 97.8 138 42.0
SGA_v2.0_scaffold85G26613 Striga asiatica HOM05D005727 ORTHO05D007324 6.9e-18 94.7 88 71.6
Duzib147G0221 Durio zibethinus HOM05D004226 ORTHO05D004842 3.8e-16 89.0 125 43.2
Lj2P1154T27 Lonicera japonica HOM05D004226 ORTHO05D004842 8.5e-16 87.8 61 73.8
AT5G48480 Arabidopsis thaliana HOM05D004226 ORTHO05D004842 2.5e-15 86.3 154 40.3
Cfa011865 Carpinus fangiana HOM05D004226 ORTHO05D004842 3.2e-15 85.9 90 53.3
CARHR183600 Cardamine hirsuta HOM05D004226 ORTHO05D004842 4.6e-14 82.0 161 35.4
FAN15G3314 Fragaria x ananassa HOM05D004226 ORTHO05D004842 4.6e-14 82.0 152 38.8
unitig_0.g1219 Utricularia gibba HOM05D004226 ORTHO05D004842 7.9e-14 81.3 94 48.9
BcaB07g30025 Brassica carinata HOM05D004226 ORTHO05D004842 1.0e-13 80.9 140 41.4
AL8G21330 Arabidopsis lyrata HOM05D004226 ORTHO05D004842 2.3e-13 79.7 145 39.3
FvH4_2g17810 Fragaria vesca HOM05D004226 ORTHO05D004842 2.3e-13 79.7 152 38.2
FAN24G0678 Fragaria x ananassa HOM05D004226 ORTHO05D004842 5.1e-13 78.6 152 37.5
FAN27G2858 Fragaria x ananassa HOM05D004226 ORTHO05D004842 8.8e-13 77.8 152 37.5
FAN27G3147 Fragaria x ananassa HOM05D004226 ORTHO05D004842 8.8e-13 77.8 152 37.5
MD10G1152100 Malus domestica HOM05D004226 ORTHO05D004842 2.0e-12 76.6 167 31.7
MD05G1159600 Malus domestica HOM05D004226 ORTHO05D004842 1.3e-11 73.9 170 31.8
Sc19g0005500 Simmondsia chinensis HOM05D004226 ORTHO05D004842 1.3e-11 73.9 77 50.6
Glyma.14G148600 Glycine max HOM05D004226 ORTHO05D004842 1.7e-11 73.6 70 54.3
Psat0s337g0040 Pisum sativum HOM05D004226 ORTHO05D004842 6.3e-11 71.6 66 56.1
BcaB07g30020 Brassica carinata HOM05D004226 ORTHO05D004842 8.2e-11 71.2 107 43.0
RcHm_v2.0_Chr6g0282841 Rosa chinensis HOM05D004226 ORTHO05D004842 1.8e-10 70.1 152 35.5
Pp3c13_5750 Physcomitrium patens HOM05D004226 ORTHO05D004842 2.0e-09 66.6 141 34.0
SEGI_39221 Sequoiadendron giganteum HOM05D004226 ORTHO05D004842 8.5e-08 61.2 81 44.4
SEGI_14551 Sequoiadendron giganteum HOM05D004226 ORTHO05D004842 3.2e-07 59.3 59 50.8
SEGI_24806 Sequoiadendron giganteum HOM05D004226 ORTHO05D004842 3.2e-07 59.3 59 50.8
Nn7g37465 Nelumbo nucifera HOM05D004226 ORTHO05D004842 3.6e-06 55.8 61 47.5
Nn4g25974 Nelumbo nucifera HOM05D066638 ORTHO05D004842 4.7e-06 55.5 55 52.7
BcaC06g31007 Brassica carinata HOM05D004226 ORTHO05D004842 7.9e-06 54.7 136 29.4


User provided reference genes

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