Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.21001 Avicennia marina HOM05D002025 ORTHO05D001991 4.9e-58 228.0 154 100.0
Migut.O00547 Erythranthe guttata HOM05D002025 ORTHO05D001991 1.3e-26 123.6 159 57.9
SalBow6G1158 Salvia bowleyana HOM05D002025 ORTHO05D001991 2.9e-18 95.9 168 48.2
Migut.D02459 Erythranthe guttata HOM05D002025 ORTHO05D001991 4.6e-16 88.6 103 58.3
Oeu026356.1 Olea europaea HOM05D002025 ORTHO05D001991 2.3e-15 86.3 103 43.7
Oeu048818.1 Olea europaea HOM05D002025 ORTHO05D001991 1.4e-12 77.0 179 44.7
Sopen06g030250 Solanum pennellii HOM05D002025 ORTHO05D001991 6.9e-12 74.7 105 50.5
Migut.N02433 Erythranthe guttata HOM05D002025 ORTHO05D001991 2.6e-11 72.8 99 49.5
Nitab4.5_0002183g0040 Nicotiana tabacum HOM05D002025 ORTHO05D001991 2.6e-11 72.8 106 52.8
Solyc06g073850.1 Solanum lycopersicum HOM05D002025 ORTHO05D001991 3.4e-11 72.4 105 50.5
unitig_21.g20392 Utricularia gibba HOM05D002025 ORTHO05D001991 5.8e-11 71.6 106 38.7
PGSC0003DMG400005908 Solanum tuberosum HOM05D002025 ORTHO05D001991 1.7e-10 70.1 105 50.5
MSTRG.17669 Avicennia marina HOM05D002025 ORTHO05D001991 4.9e-10 68.6 101 42.6
Peaxi162Scf00098g00155 Petunia axillaris HOM05D002025 ORTHO05D001991 4.9e-10 68.6 100 41.0
Oeu058188.1 Olea europaea HOM05D002025 ORTHO05D001991 1.1e-09 67.4 169 37.3
Oeu045022.1 Olea europaea HOM05D002025 ORTHO05D001991 2.1e-08 63.2 161 31.1
Cpa.g.sc5.177 Carica papaya HOM05D002025 ORTHO05D001991 2.7e-08 62.8 107 39.3
Peaxi162Scf00203g00052 Petunia axillaris HOM05D002025 ORTHO05D001991 2.7e-08 62.8 100 38.0
SalBow3G3909 Salvia bowleyana HOM05D002025 ORTHO05D001991 2.7e-08 62.8 109 37.6
Nitab4.5_0000835g0060 Nicotiana tabacum HOM05D002025 ORTHO05D001991 6.0e-08 61.6 164 37.2
TAR623G1549 Trochodendron aralioides HOM05D002025 ORTHO05D001991 6.0e-08 61.6 161 30.4
Migut.J00733 Erythranthe guttata HOM05D002025 ORTHO05D001991 1.0e-07 60.8 108 37.0
Medtr7g106820 Medicago truncatula HOM05D002025 ORTHO05D001991 1.0e-07 60.8 163 29.4
Nitab4.5_0003557g0010 Nicotiana tabacum HOM05D002025 ORTHO05D001991 1.3e-07 60.5 164 33.5
Peaxi162Scf00345g00619 Petunia axillaris HOM05D002025 ORTHO05D001991 1.3e-07 60.5 155 32.3
Cc06_g06920 Coffea canephora HOM05D002025 ORTHO05D001991 2.3e-07 59.7 156 29.5
Nitab4.5_0000875g0050 Nicotiana tabacum HOM05D002025 ORTHO05D001991 3.0e-07 59.3 99 46.5
PGR142G1790 Punica granatum HOM05D002025 ORTHO05D001991 5.1e-07 58.5 159 28.9
FAN21G1873 Fragaria x ananassa HOM05D002025 ORTHO05D001991 8.7e-07 57.8 111 34.2
Thhalv10021370m.g Eutrema salsugineum HOM05D002025 ORTHO05D001991 1.1e-06 57.4 131 32.1
FAN09G2632 Fragaria x ananassa HOM05D002025 ORTHO05D001991 1.1e-06 57.4 112 32.1
Sopen01g004740 Solanum pennellii HOM05D002025 ORTHO05D001991 1.1e-06 57.4 106 34.9
BraA01t04167Z Brassica rapa HOM05D002025 ORTHO05D001991 1.5e-06 57.0 127 32.3
Hma1.2p1_0969F.1_g242560 Hydrangea macrophylla HOM05D002025 ORTHO05D001991 1.5e-06 57.0 101 34.7
CARHR086240 Cardamine hirsuta HOM05D002025 ORTHO05D001991 1.9e-06 56.6 132 33.3
Duzib170G0914 Durio zibethinus HOM05D002025 ORTHO05D001991 1.9e-06 56.6 107 34.6
FvH4_6g20920 Fragaria vesca HOM05D002025 ORTHO05D001991 1.9e-06 56.6 112 32.1
FAN02G0183 Fragaria x ananassa HOM05D002025 ORTHO05D001991 1.9e-06 56.6 112 32.1
FAN14G3941 Fragaria x ananassa HOM05D002025 ORTHO05D001991 1.9e-06 56.6 112 32.1
Gohir.A04G058400 Gossypium hirsutum HOM05D002025 ORTHO05D001991 1.9e-06 56.6 165 27.9
HanXRQChr14g0453261 Helianthus annuus HOM05D002025 ORTHO05D001991 1.9e-06 56.6 104 33.7
Aa31LG5G8620 Aethionema arabicum HOM05D002025 ORTHO05D001991 2.5e-06 56.2 103 34.0
Carub.0003s1102 Capsella rubella HOM05D002025 ORTHO05D001991 2.5e-06 56.2 131 32.1
Cfa010216 Carpinus fangiana HOM05D002025 ORTHO05D001991 2.5e-06 56.2 167 31.1
Duzib128G1567 Durio zibethinus HOM05D002025 ORTHO05D001991 2.5e-06 56.2 109 35.8
Nn6g34593 Nelumbo nucifera HOM05D002025 ORTHO05D001991 2.5e-06 56.2 106 36.8
Oeu020161.1 Olea europaea HOM05D002025 ORTHO05D001991 2.5e-06 56.2 108 30.6
Ah.02g116090 Amaranthus hybridus HOM05D002241 ORTHO05D002458 3.3e-06 55.8 135 28.9
BcaB04g21123 Brassica carinata HOM05D002025 ORTHO05D001991 3.3e-06 55.8 131 34.4
Duzib168G1208 Durio zibethinus HOM05D002025 ORTHO05D001991 3.3e-06 55.8 100 32.0
FAN05G4348 Fragaria x ananassa HOM05D002025 ORTHO05D001991 3.3e-06 55.8 112 31.2
FAN05G4575 Fragaria x ananassa HOM05D002025 ORTHO05D001991 3.3e-06 55.8 112 31.2
Oeu058126.1 Olea europaea HOM05D002025 ORTHO05D001991 3.3e-06 55.8 154 28.6
Rhsim01G0198700 Rhododendron simsii HOM05D002025 ORTHO05D001991 3.3e-06 55.8 169 40.8
TAR369G1029 Trochodendron aralioides HOM05D002025 ORTHO05D001991 3.3e-06 55.8 165 29.1
Aqoxy1G00592 Aquilegia oxysepala HOM05D002025 ORTHO05D001991 4.3e-06 55.5 104 33.7
Haze_23603 Corylus avellana HOM05D002025 ORTHO05D001991 4.3e-06 55.5 116 33.6
Nn2g12506 Nelumbo nucifera HOM05D002025 ORTHO05D001991 4.3e-06 55.5 103 35.9
Nn2g12507 Nelumbo nucifera HOM05D002025 ORTHO05D001991 4.3e-06 55.5 103 35.9
PGSC0003DMG400013131 Solanum tuberosum HOM05D002025 ORTHO05D001991 4.3e-06 55.5 100 33.0
Lalb_Chr01g0017741 Lupinus albus HOM05D002025 ORTHO05D001991 5.6e-06 55.1 157 27.4
RcHm_v2.0_Chr5g0049201 Rosa chinensis HOM05D002025 ORTHO05D001991 5.6e-06 55.1 108 35.2
Solyc01g009250.3 Solanum lycopersicum HOM05D002025 ORTHO05D001991 5.6e-06 55.1 100 33.0
Thecc.09G268500 Theobroma cacao HOM05D002025 ORTHO05D001991 5.6e-06 55.1 101 35.6
A05p37640 Brassica napus HOM05D002025 ORTHO05D001991 7.4e-06 54.7 122 30.3
C05p56220 Brassica napus HOM05D002025 ORTHO05D001991 7.4e-06 54.7 122 30.3
BolC5t34286H Brassica oleracea HOM05D002025 ORTHO05D001991 7.4e-06 54.7 122 30.3
BraA05t22561Z Brassica rapa HOM05D002025 ORTHO05D001991 7.4e-06 54.7 122 30.3
FAN11G1146 Fragaria x ananassa HOM05D002025 ORTHO05D001991 7.4e-06 54.7 113 32.7
Hma1.2p1_0401F.1_g144760 Hydrangea macrophylla HOM05D002025 ORTHO05D001991 7.4e-06 54.7 98 44.9
MD12G1045100 Malus domestica HOM05D002025 ORTHO05D001991 7.4e-06 54.7 117 36.8
Nitab4.5_0002426g0050 Nicotiana tabacum HOM05D002025 ORTHO05D001991 7.4e-06 54.7 108 44.4
Psat5g262960 Pisum sativum HOM05D002025 ORTHO05D001991 9.6e-06 54.3 106 36.8


User provided reference genes

Program Settings