Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.20975 Avicennia marina HOM05D008362 ORTHO05D010554 5.8e-60 234.2 131 100.0
Migut.D02512 Erythranthe guttata HOM05D008362 ORTHO05D010554 6.0e-25 117.9 117 59.0
Sopen06g034630 Solanum pennellii HOM05D008362 ORTHO05D010554 8.7e-16 87.4 109 50.5
SGA_v2.0_scaffold156G37277 Striga asiatica HOM05D008362 ORTHO05D010554 8.7e-16 87.4 124 46.8
PGSC0003DMG400020171 Solanum tuberosum HOM05D008362 ORTHO05D010554 4.3e-15 85.1 107 49.5
Nitab4.5_0002671g0030 Nicotiana tabacum HOM05D008362 ORTHO05D010554 2.8e-14 82.4 98 51.0
unitig_746.g26595 Utricularia gibba HOM05D008362 ORTHO05D010554 2.6e-12 75.9 116 44.8
Nitab4.5_0003020g0140 Nicotiana tabacum HOM05D008362 ORTHO05D010554 3.4e-12 75.5 96 46.9
Solyc06g083250.4 Solanum lycopersicum HOM05D008362 ORTHO05D010554 2.2e-11 72.8 114 44.7
Peaxi162Scf01312g00019 Petunia axillaris HOM05D008362 ORTHO05D010554 5.0e-11 71.6 113 46.0
arahy.Tifrunner.gnm1.ann1.L802W9 Arachis hypogaea HOM05D008362 ORTHO05D010554 8.4e-11 70.9 110 42.7
Psat4g204280 Pisum sativum HOM05D008362 ORTHO05D010554 2.5e-10 69.3 112 43.8
CiPaw.13G050500 Carya illinoinensis HOM05D008362 ORTHO05D010554 3.2e-10 68.9 85 50.6
CSS0045887 Camellia sinensis var. sinensis HOM05D008362 ORTHO05D010554 1.6e-09 66.6 117 44.4
QL09p049939 Quercus lobata HOM05D008362 ORTHO05D010554 2.7e-09 65.9 84 52.4
Hund05585 Selenicereus undatus HOM05D008362 ORTHO05D010554 1.0e-08 63.9 110 41.8
Lj3g0027645 Lotus japonicus HOM05D008362 ORTHO05D010554 2.3e-08 62.8 108 42.6
Cc01_g16550 Coffea canephora HOM05D008362 ORTHO05D010554 5.1e-08 61.6 127 39.4
TPR.G28197 Trifolium pratense HOM05D008362 ORTHO05D010554 5.1e-08 61.6 51 62.7
Ca_23217_v3 Cicer arietinum L. HOM05D008362 ORTHO05D010554 8.7e-08 60.8 108 43.5
Gohir.A07G092300 Gossypium hirsutum HOM05D008362 ORTHO05D010554 1.1e-07 60.5 104 43.3
Lj1C90G7 Lonicera japonica HOM05D006751 ORTHO05D008710 1.5e-07 60.1 86 46.5
FAN15G1847 Fragaria x ananassa HOM05D008362 ORTHO05D010554 3.3e-07 58.9 89 46.1
Medtr8g012580 Medicago truncatula HOM05D008362 ORTHO05D010554 3.3e-07 58.9 115 41.7
Hma1.2p1_0226F.1_g095250 Hydrangea macrophylla HOM05D008362 ORTHO05D010554 7.4e-07 57.8 40 75.0
Lalb_Chr07g0194111 Lupinus albus HOM05D008362 ORTHO05D010554 7.4e-07 57.8 111 42.3
Sc17g0002020 Simmondsia chinensis HOM05D008362 ORTHO05D010554 7.4e-07 57.8 108 39.8
FAN27G1021 Fragaria x ananassa HOM05D008362 ORTHO05D010554 1.3e-06 57.0 34 82.4
GSVIVG01006384001 Vitis vinifera HOM05D008362 ORTHO05D010554 1.3e-06 57.0 103 41.7
CANSAT01G1703 Cannabis sativa HOM05D008362 ORTHO05D010554 1.6e-06 56.6 49 65.3
FAN24G1934 Fragaria x ananassa HOM05D008362 ORTHO05D010554 1.6e-06 56.6 76 48.7
TWI18G0011 Tripterygium wilfordii HOM05D008362 ORTHO05D010554 1.6e-06 56.6 47 63.8
Manes.13G051000 Manihot esculenta HOM05D008362 ORTHO05D010554 2.2e-06 56.2 83 43.4
VMungo0331G0307 Vigna mungo HOM05D008362 ORTHO05D010554 2.2e-06 56.2 61 50.8
MD05G1169400 Malus domestica HOM05D008362 ORTHO05D010554 6.3e-06 54.7 39 69.2
Phvul.010G022800 Phaseolus vulgaris HOM05D008362 ORTHO05D010554 6.3e-06 54.7 64 50.0
Glyma.16G089400 Glycine max HOM05D008362 ORTHO05D010554 8.2e-06 54.3 100 41.0


User provided reference genes

Program Settings