Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.2093 Avicennia marina HOM05D007103 ORTHO05D008948 2.7e-250 868.2 448 100.0
Migut.E00576 Erythranthe guttata HOM05D007103 ORTHO05D008948 6.7e-193 677.6 476 75.2
SGA_v2.0_scaffold127G33990 Striga asiatica HOM05D007103 ORTHO05D008948 1.2e-178 630.2 450 76.4
Lj3A854G74 Lonicera japonica HOM05D007103 ORTHO05D008948 8.6e-164 580.9 475 68.2
unitig_8.g4025 Utricularia gibba HOM05D007103 ORTHO05D008948 7.3e-163 577.8 446 70.0
GSVIVG01010248001 Vitis vinifera HOM05D007103 ORTHO05D008948 1.9e-158 563.1 467 66.2
Manes.10G065901 Manihot esculenta HOM05D007103 ORTHO05D008948 5.4e-158 561.6 458 66.4
TWI74G0969 Tripterygium wilfordii HOM05D007103 ORTHO05D008948 1.8e-153 546.6 464 64.7
CAN.G458.2 Capsicum annuum HOM05D007103 ORTHO05D008948 6.4e-151 538.1 399 71.4
Sopen04g003720 Solanum pennellii HOM05D007103 ORTHO05D008948 8.3e-151 537.7 457 65.0
Solyc04g008560.3 Solanum lycopersicum HOM05D007103 ORTHO05D008948 2.4e-150 536.2 457 64.8
PGSC0003DMG400031375 Solanum tuberosum HOM05D007103 ORTHO05D008948 1.2e-149 533.9 457 64.6
Prupe.1G342500 Prunus persica HOM05D007103 ORTHO05D008948 1.7e-148 530.0 469 63.1
Dinv06214 Davidia involucrata HOM05D007103 ORTHO05D008948 1.1e-147 527.3 459 65.1
TAR371G1171 Trochodendron aralioides HOM05D007103 ORTHO05D008948 3.6e-146 522.3 463 63.3
Cfa015108 Carpinus fangiana HOM05D007103 ORTHO05D008948 4.7e-146 521.9 462 63.6
Nitab4.5_0000129g0430 Nicotiana tabacum HOM05D007103 ORTHO05D008948 6.8e-145 518.1 458 63.3
Sed0022925 Sechium edule HOM05D007103 ORTHO05D008948 8.9e-145 517.7 458 61.6
Haze_01571 Corylus avellana HOM05D007103 ORTHO05D008948 2.0e-144 516.5 460 63.3
Thecc.02G296200 Theobroma cacao HOM05D007103 ORTHO05D008948 5.8e-144 515.0 458 61.8
Nitab4.5_0007973g0020 Nicotiana tabacum HOM05D007103 ORTHO05D008948 1.3e-143 513.8 456 62.3
HanXRQChr14g0446891 Helianthus annuus HOM05D007103 ORTHO05D008948 4.9e-143 511.9 456 62.3
Rhsim04G0168800 Rhododendron simsii HOM05D007103 ORTHO05D008948 4.9e-143 511.9 526 57.8
Peaxi162Scf00329g00938 Petunia axillaris HOM05D007103 ORTHO05D008948 1.4e-142 510.4 457 63.5
CSS0049146 Camellia sinensis var. sinensis HOM05D007103 ORTHO05D008948 1.6e-141 506.9 448 63.4
COL.COLO4_27515 Corchorus olitorius HOM05D007103 ORTHO05D008948 6.0e-141 505.0 451 60.1
RcHm_v2.0_Chr4g0446051 Rosa chinensis HOM05D007103 ORTHO05D008948 1.7e-140 503.4 471 60.5
MD13G1010500 Malus domestica HOM05D007103 ORTHO05D008948 1.1e-139 500.7 473 60.3
Sabra08G0108900 Salix brachista HOM05D007103 ORTHO05D008948 3.3e-139 499.2 442 61.3
Gorai.002G168100 Gossypium raimondii HOM05D007103 ORTHO05D008948 1.2e-138 497.3 458 59.6
Glyma.05G135400 Glycine max HOM05D007103 ORTHO05D008948 2.8e-138 496.1 454 61.2
MELO3C005211.2 Cucumis melo HOM05D007103 ORTHO05D008948 3.6e-138 495.7 458 59.2
Gohir.D01G137900 Gossypium hirsutum HOM05D007103 ORTHO05D008948 4.7e-138 495.4 458 59.4
CsaV3_5G017430 Cucumis sativus L. HOM05D007103 ORTHO05D008948 8.1e-138 494.6 457 59.1
PGR044G1063 Punica granatum HOM05D007103 ORTHO05D008948 2.4e-137 493.0 453 60.5
arahy.Tifrunner.gnm1.ann1.U7H2Z0 Arachis hypogaea HOM05D007103 ORTHO05D008948 4.0e-137 492.3 453 59.8
QL03p041867 Quercus lobata HOM05D007103 ORTHO05D008948 6.9e-137 491.5 461 61.6
arahy.Tifrunner.gnm1.ann1.CDY64E Arachis hypogaea HOM05D007103 ORTHO05D008948 1.2e-136 490.7 453 59.6
Eucgr.B02623 Eucalyptus grandis HOM05D007103 ORTHO05D008948 2.2e-135 486.5 458 61.4
Gohir.A01G145152 Gossypium hirsutum HOM05D007103 ORTHO05D008948 3.8e-135 485.7 458 58.1
DCAR_030327 Daucus carota HOM05D007103 ORTHO05D008948 2.1e-133 479.9 457 57.8
Nn3g18722 Nelumbo nucifera HOM05D007103 ORTHO05D008948 7.8e-133 478.0 424 61.3
Potri.008G143700 Populus trichocarpa HOM05D007103 ORTHO05D008948 1.1e-131 474.2 421 61.5
CDE08G0078 Ceratophyllum demersum HOM05D007103 ORTHO05D008948 5.6e-131 471.9 458 58.1
Ciclev10005118m.g Citrus clementina HOM05D007103 ORTHO05D008948 1.3e-130 470.7 398 64.1
CANSAT78G0644 Cannabis sativa HOM05D007103 ORTHO05D008948 1.4e-129 467.2 462 58.9
Ca_18212_v3 Cicer arietinum L. HOM05D007103 ORTHO05D008948 4.0e-129 465.7 451 58.3
HPP92_022082 Vanilla planifolia HOM05D007103 ORTHO05D008948 5.3e-129 465.3 462 58.2
FAN12G1264 Fragaria x ananassa HOM05D007103 ORTHO05D008948 2.6e-128 463.0 463 57.0
FAN17G1256 Fragaria x ananassa HOM05D007103 ORTHO05D008948 2.6e-128 463.0 464 56.9
FAN07G2615 Fragaria x ananassa HOM05D007103 ORTHO05D008948 3.4e-128 462.6 463 56.8
Psat7g086680 Pisum sativum HOM05D007103 ORTHO05D008948 2.9e-127 459.5 454 57.3
THA.LOC104805941 Tarenaya hassleriana HOM05D007103 ORTHO05D008948 3.2e-126 456.1 463 57.2
PSO478G2004 Papaver somniferum HOM05D007103 ORTHO05D008948 7.1e-126 454.9 462 58.7
Lj4g0001083 Lotus japonicus HOM05D007103 ORTHO05D008948 3.5e-125 452.6 454 56.8
Carub.0005s0121 Capsella rubella HOM05D007103 ORTHO05D008948 6.7e-124 448.4 464 58.0
Lalb_Chr13g0293061 Lupinus albus HOM05D007103 ORTHO05D008948 1.3e-122 444.1 455 56.3
AL5G11410 Arabidopsis lyrata HOM05D007103 ORTHO05D008948 2.8e-122 443.0 466 56.9
ECA246G2851 Erigeron canadensis HOM05D007103 ORTHO05D008948 4.5e-120 435.6 443 55.1
ATR0618G149 Amborella trichopoda HOM05D007103 ORTHO05D008948 5.8e-120 435.3 465 55.7
Glyma.08G090600 Glycine max HOM05D007103 ORTHO05D008948 5.8e-120 435.3 394 60.7
SalBow2G1702 Salvia bowleyana HOM05D007103 ORTHO05D008948 1.3e-119 434.1 267 83.5
Sp2g13560 Schrenkiella parvula HOM05D007103 ORTHO05D008948 3.8e-119 432.6 472 57.6
Lsat_1_v5_gn_3_27560 Lactuca sativa HOM05D007103 ORTHO05D008948 7.9e-117 424.9 458 55.7
vmacro08589 Vaccinium macrocarpon HOM05D007103 ORTHO05D008948 3.0e-116 422.9 345 66.4
Sc03g0005470 Simmondsia chinensis HOM05D007103 ORTHO05D008948 1.6e-114 417.2 456 54.8
CiPaw.05G161900 Carya illinoinensis HOM05D007103 ORTHO05D008948 4.8e-114 415.6 333 66.7
CARHR144820 Cardamine hirsuta HOM05D007103 ORTHO05D008948 1.1e-113 414.5 466 56.2
Aa31LG2G7810 Aethionema arabicum HOM05D007103 ORTHO05D008948 2.6e-112 409.8 466 53.6
BcaB07g30707 Brassica carinata HOM05D007103 ORTHO05D008948 3.4e-112 409.5 470 57.0
MBI06_g12320_MAGBIO Magnolia biondii HOM05D007103 ORTHO05D008948 1.3e-111 407.5 330 65.5
Aqoxy3G00022 Aquilegia oxysepala HOM05D007103 ORTHO05D008948 2.9e-111 406.4 397 57.2
AT2G02148 Arabidopsis thaliana HOM05D007103 ORTHO05D008948 6.5e-111 405.2 460 55.0
BraA09t37988Z Brassica rapa HOM05D007103 ORTHO05D008948 1.6e-109 400.6 464 54.1
BcaC04g21529 Brassica carinata HOM05D007103 ORTHO05D008948 6.0e-109 398.7 464 54.5
Thhalv10004194m.g Eutrema salsugineum HOM05D007103 ORTHO05D008948 7.9e-109 398.3 468 53.8
BolC9t55934H Brassica oleracea HOM05D007103 ORTHO05D008948 3.9e-108 396.0 464 53.9
C09p30690 Brassica napus HOM05D007103 ORTHO05D008948 5.1e-108 395.6 459 54.2
ClCG01G007020 Citrullus lanatus HOM05D007103 ORTHO05D008948 2.5e-107 393.3 342 59.4
TPR.G34765 Trifolium pratense HOM05D007103 ORTHO05D008948 3.3e-107 392.9 452 51.8
A09p23820 Brassica napus HOM05D007103 ORTHO05D008948 4.3e-107 392.5 466 53.2
Actinidia32355 Actinidia chinensis HOM05D007103 ORTHO05D008948 1.3e-106 391.0 359 62.1
Phvul.002G186800 Phaseolus vulgaris HOM05D007103 ORTHO05D008948 1.6e-106 390.6 451 51.0
Zm00001eb228800 Zea mays HOM05D007103 ORTHO05D008948 2.4e-105 386.7 393 54.5
AUR62003469 Chenopodium quinoa HOM05D007103 ORTHO05D008948 9.0e-105 384.8 441 52.2
AUR62017776 Chenopodium quinoa HOM05D007103 ORTHO05D008948 5.0e-103 379.0 423 52.5
FvH4_4g36300 Fragaria vesca HOM05D007103 ORTHO05D008948 1.8e-100 370.5 342 57.9
Ciclev10010767m.g Citrus clementina HOM05D007103 ORTHO05D008948 8.8e-100 368.2 254 71.3
PSO017G4620 Papaver somniferum HOM05D007103 ORTHO05D008948 8.8e-100 368.2 385 55.3
FAN22G0934 Fragaria x ananassa HOM05D007103 ORTHO05D008948 1.0e-95 354.8 404 50.2
VMungo0251G2627 Vigna mungo HOM05D007103 ORTHO05D008948 4.8e-90 335.9 387 50.6
BcaB07g30709 Brassica carinata HOM05D007103 ORTHO05D008948 1.8e-89 334.0 434 49.1
EL10Ac6g15409 Beta vulgaris HOM05D007103 ORTHO05D008948 2.4e-89 333.6 527 43.1
SEGI_34932 Sequoiadendron giganteum HOM05D007103 ORTHO05D008948 7.2e-78 295.4 324 51.5
SMO358G0481 Selaginella moellendorffii HOM05D007103 ORTHO05D008948 1.3e-74 284.6 459 40.5
Atru.chr11.1054 Acer truncatum HOM05D007103 ORTHO05D008948 5.3e-73 279.3 428 44.6
Mapoly0001s0015 Marchantia polymorpha HOM05D007103 ORTHO05D008948 2.0e-72 277.3 494 41.9
Actinidia25204 Actinidia chinensis HOM05D007103 ORTHO05D008948 2.7e-72 276.9 179 77.1
Pp3c5_2140 Physcomitrium patens HOM05D007103 ORTHO05D008948 4.4e-67 259.6 484 38.8
Pp3c6_26300 Physcomitrium patens HOM05D007103 ORTHO05D008948 1.3e-63 248.1 483 36.9
Actinidia31381 Actinidia chinensis HOM05D007103 ORTHO05D008948 1.6e-61 241.1 394 43.4
AagrBONN_evm.TU.Sc2ySwM_368.3256 Anthoceros agrestis HOM05D007103 ORTHO05D008948 1.3e-50 204.9 336 37.2
CBR_g70721 Chara braunii HOM05D007103 ORTHO05D008948 2.9e-50 203.8 434 36.2
Medtr5g010860 Medicago truncatula HOM05D007103 ORTHO05D008948 9.2e-49 198.7 197 56.3
Cpa.g.sc2.105 Carica papaya HOM05D007103 ORTHO05D008948 2.3e-44 184.1 212 52.4
Pp3c6_29570 Physcomitrium patens HOM05D007103 ORTHO05D008948 1.4e-28 131.7 193 39.9
Lsat_1_v5_gn_3_133181 Lactuca sativa HOM05D003297 ORTHO05D004027 2.2e-26 124.4 171 44.4
Hund18263 Selenicereus undatus HOM05D007103 ORTHO05D008948 1.3e-21 108.6 182 39.6
Cpa.g.sc2.103 Carica papaya HOM05D007103 ORTHO05D008948 1.9e-14 84.7 63 65.1
CAN.G166.15 Capsicum annuum HOM05D007103 ORTHO05D008948 1.6e-13 81.6 83 49.4
Medtr6g043130 Medicago truncatula HOM05D007103 ORTHO05D008948 4.6e-08 63.5 43 67.4


User provided reference genes

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