Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.20727 Avicennia marina HOM05D004705 ORTHO05D005595 0.0e+00 1529.2 820 100.0
MSTRG.17159 Avicennia marina HOM05D004705 ORTHO05D005595 1.1e-284 983.4 828 67.4
SGA_v2.0_scaffold153G36966 Striga asiatica HOM05D004705 ORTHO05D005595 7.8e-272 940.6 828 64.5
SalBow5G4930 Salvia bowleyana HOM05D004705 ORTHO05D005595 1.1e-262 910.2 758 66.9
Cc04_g03760 Coffea canephora HOM05D004705 ORTHO05D005595 9.0e-260 900.6 826 60.4
Oeu051920.1 Olea europaea HOM05D004705 ORTHO05D005595 2.7e-256 889.0 847 60.9
Dinv38075 Davidia involucrata HOM05D004705 ORTHO05D005595 8.2e-245 850.9 829 58.0
Oeu000022.1 Olea europaea HOM05D004705 ORTHO05D005595 5.8e-243 844.7 832 59.5
Peaxi162Scf00015g00532 Petunia axillaris HOM05D004705 ORTHO05D005595 1.2e-240 837.0 852 57.0
PGSC0003DMG400005697 Solanum tuberosum HOM05D004705 ORTHO05D005595 6.9e-236 821.2 842 56.5
Sopen03g038820 Solanum pennellii HOM05D004705 ORTHO05D005595 1.2e-235 820.5 843 56.3
CSS0001459 Camellia sinensis var. sinensis HOM05D004705 ORTHO05D005595 3.2e-233 812.4 829 58.4
Solyc03g119940.3 Solanum lycopersicum HOM05D004705 ORTHO05D005595 9.3e-233 810.8 842 55.5
CSS0020826 Camellia sinensis var. sinensis HOM05D004705 ORTHO05D005595 3.6e-232 808.9 829 58.1
vmacro16932 Vaccinium macrocarpon HOM05D004705 ORTHO05D005595 1.6e-229 800.0 852 55.5
CAN.G438.96 Capsicum annuum HOM05D004705 ORTHO05D005595 7.7e-227 791.2 842 55.5
Haze_16487 Corylus avellana HOM05D004705 ORTHO05D005595 1.0e-223 780.8 827 57.1
Nitab4.5_0004817g0040 Nicotiana tabacum HOM05D004705 ORTHO05D005595 4.4e-222 775.4 838 54.7
Cfa002032 Carpinus fangiana HOM05D004705 ORTHO05D005595 1.4e-220 770.4 827 56.8
RhsimUnG0009400 Rhododendron simsii HOM05D004705 ORTHO05D005595 2.4e-220 769.6 901 54.6
Rhsim12G0195000 Rhododendron simsii HOM05D004705 ORTHO05D005595 1.3e-218 763.8 901 54.7
Thecc.06G077700 Theobroma cacao HOM05D004705 ORTHO05D005595 2.9e-218 762.7 826 53.3
QL05p026953 Quercus lobata HOM05D004705 ORTHO05D005595 3.2e-217 759.2 826 55.4
Prupe.3G077300 Prunus persica HOM05D004705 ORTHO05D005595 6.1e-216 755.0 826 53.4
Ciclev10024977m.g Citrus clementina HOM05D004705 ORTHO05D005595 7.9e-216 754.6 833 53.2
Potri.003G058600 Populus trichocarpa HOM05D004705 ORTHO05D005595 1.5e-214 750.4 826 53.6
Lj5A66T57 Lonicera japonica HOM05D004705 ORTHO05D005595 2.2e-213 746.5 840 54.5
ECA247G3649 Erigeron canadensis HOM05D004705 ORTHO05D005595 6.3e-213 745.0 837 52.7
Duzib235G0494 Durio zibethinus HOM05D004705 ORTHO05D005595 1.8e-212 743.4 827 51.9
Dinv30551 Davidia involucrata HOM05D004705 ORTHO05D005595 3.8e-210 735.7 805 54.2
FvH4_6g30700 Fragaria vesca HOM05D004705 ORTHO05D005595 1.1e-209 734.2 826 53.1
TWI75G0140 Tripterygium wilfordii HOM05D004705 ORTHO05D005595 1.1e-209 734.2 829 54.5
FAN09G0848 Fragaria x ananassa HOM05D004705 ORTHO05D005595 2.5e-209 733.0 827 52.7
Atru.chr1.3167 Acer truncatum HOM05D004705 ORTHO05D005595 1.6e-208 730.3 826 51.8
MD17G1201400 Malus domestica HOM05D004705 ORTHO05D005595 2.7e-208 729.6 843 51.1
CsaV3_3G026670 Cucumis sativus L. HOM05D004705 ORTHO05D005595 3.6e-208 729.2 826 52.2
DCAR_025463 Daucus carota HOM05D004705 ORTHO05D005595 3.6e-208 729.2 837 51.5
Manes.04G119400 Manihot esculenta HOM05D004705 ORTHO05D005595 3.6e-208 729.2 828 52.3
RcHm_v2.0_Chr2g0137071 Rosa chinensis HOM05D004705 ORTHO05D005595 8.0e-208 728.0 827 52.5
ClCG07G012910 Citrullus lanatus HOM05D004705 ORTHO05D005595 1.4e-207 727.2 830 53.5
MELO3C012944.2 Cucumis melo HOM05D004705 ORTHO05D005595 2.3e-207 726.5 831 52.3
FAN02G3197 Fragaria x ananassa HOM05D004705 ORTHO05D005595 6.7e-207 724.9 829 51.7
Glyma.15G011700 Glycine max HOM05D004705 ORTHO05D005595 6.7e-207 724.9 841 50.3
Gohir.A02G124100 Gossypium hirsutum HOM05D004705 ORTHO05D005595 1.2e-206 724.2 831 52.1
CiPaw.01G242500 Carya illinoinensis HOM05D004705 ORTHO05D005595 9.7e-206 721.1 828 53.6
Migut.B01589 Erythranthe guttata HOM05D004705 ORTHO05D005595 9.7e-206 721.1 823 52.4
HanXRQChr02g0032571 Helianthus annuus HOM05D004705 ORTHO05D005595 1.3e-205 720.7 825 51.3
FAN05G0816 Fragaria x ananassa HOM05D004705 ORTHO05D005595 1.7e-205 720.3 828 51.1
Phvul.005G173800 Phaseolus vulgaris HOM05D004705 ORTHO05D005595 2.8e-205 719.5 828 51.9
Gohir.D03G064900 Gossypium hirsutum HOM05D004705 ORTHO05D005595 4.8e-205 718.8 866 50.3
Glyma.13G362100 Glycine max HOM05D004705 ORTHO05D005595 6.3e-205 718.4 827 53.4
FAN14G4493 Fragaria x ananassa HOM05D004705 ORTHO05D005595 3.1e-204 716.1 794 53.3
Gorai.002G057500 Gossypium raimondii HOM05D004705 ORTHO05D005595 3.1e-204 716.1 866 50.2
TAR383G1056 Trochodendron aralioides HOM05D004705 ORTHO05D005595 9.1e-204 714.5 842 52.5
TAR626G1984 Trochodendron aralioides HOM05D004705 ORTHO05D005595 3.5e-203 712.6 844 50.8
Duzib160G0698 Durio zibethinus HOM05D004705 ORTHO05D005595 1.3e-202 710.7 795 51.7
Sed0012410 Sechium edule HOM05D004705 ORTHO05D005595 1.3e-202 710.7 831 51.4
Lsat_1_v5_gn_1_33801 Lactuca sativa HOM05D004705 ORTHO05D005595 5.5e-201 705.3 849 50.6
Lj3g0018532 Lotus japonicus HOM05D004705 ORTHO05D005595 2.1e-200 703.4 807 50.9
Potri.001G175500 Populus trichocarpa HOM05D004705 ORTHO05D005595 8.0e-200 701.4 799 52.2
GSVIVG01017208001 Vitis vinifera HOM05D004705 ORTHO05D005595 1.1e-196 691.0 826 50.6
CANSAT56G4120 Cannabis sativa HOM05D004705 ORTHO05D005595 7.7e-195 684.9 837 51.0
PGR031G3493 Punica granatum HOM05D004705 ORTHO05D005595 1.0e-194 684.5 828 50.5
VMungo1080G1183 Vigna mungo HOM05D004705 ORTHO05D005595 2.1e-192 676.8 827 51.8
Medtr2g102680 Medicago truncatula HOM05D004705 ORTHO05D005595 1.8e-191 673.7 790 49.9
Nn8g39334 Nelumbo nucifera HOM05D004705 ORTHO05D005595 8.3e-189 664.8 822 49.3
AUR62016408 Chenopodium quinoa HOM05D004705 ORTHO05D005595 1.8e-188 663.7 835 47.7
EL10Ac9g21966 Beta vulgaris HOM05D004705 ORTHO05D005595 3.5e-187 659.4 840 48.6
Aqoxy7G01953 Aquilegia oxysepala HOM05D004705 ORTHO05D005595 3.8e-186 656.0 847 49.7
unitig_26.g8885 Utricularia gibba HOM05D004705 ORTHO05D005595 8.0e-184 648.3 652 56.4
Manes.11G049500 Manihot esculenta HOM05D004705 ORTHO05D005595 1.4e-183 647.5 637 56.0
Ca_01096_v3 Cicer arietinum L. HOM05D004705 ORTHO05D005595 2.3e-183 646.7 791 48.8
Sp3g13840 Schrenkiella parvula HOM05D004705 ORTHO05D005595 3.4e-182 642.9 838 47.0
Hund00574 Selenicereus undatus HOM05D004705 ORTHO05D005595 2.2e-181 640.2 834 47.8
THA.LOC104818041 Tarenaya hassleriana HOM05D004705 ORTHO05D005595 2.9e-181 639.8 838 48.1
Lalb_Chr24g0395661 Lupinus albus HOM05D004705 ORTHO05D005595 1.4e-180 637.5 689 52.1
TPR.G37249 Trifolium pratense HOM05D004705 ORTHO05D005595 7.0e-180 635.2 815 47.1
Carub.0003s1530 Capsella rubella HOM05D004705 ORTHO05D005595 1.6e-179 634.0 832 47.5
Aa31LG8G2800 Aethionema arabicum HOM05D004705 ORTHO05D005595 2.3e-178 630.2 830 46.9
AUR62011594 Chenopodium quinoa HOM05D004705 ORTHO05D005595 6.6e-178 628.6 631 55.3
Lalb_Chr22g0351091 Lupinus albus HOM05D004705 ORTHO05D005595 9.5e-177 624.8 778 48.1
AL3G28180 Arabidopsis lyrata HOM05D004705 ORTHO05D005595 1.6e-176 624.0 831 46.9
A05p33830 Brassica napus HOM05D004705 ORTHO05D005595 2.3e-175 620.2 828 48.4
Sc12g0008970 Simmondsia chinensis HOM05D004705 ORTHO05D005595 5.2e-175 619.0 830 49.4
arahy.Tifrunner.gnm1.ann1.HFN88V Arachis hypogaea HOM05D004705 ORTHO05D005595 6.8e-175 618.6 794 51.3
MBI04_g43364_MAGBIO Magnolia biondii HOM05D004705 ORTHO05D005595 2.6e-174 616.7 871 46.2
AT3G15550 Arabidopsis thaliana HOM05D004705 ORTHO05D005595 4.4e-174 615.9 834 46.6
PSO017G1026 Papaver somniferum HOM05D004705 ORTHO05D005595 4.4e-174 615.9 828 45.2
CARHR090640 Cardamine hirsuta HOM05D004705 ORTHO05D005595 1.4e-172 610.9 826 45.9
Eucgr.J03029 Eucalyptus grandis HOM05D004705 ORTHO05D005595 1.4e-172 610.9 794 48.1
PSO170G5959 Papaver somniferum HOM05D004705 ORTHO05D005595 1.9e-172 610.5 828 44.9
Thhalv10020202m.g Eutrema salsugineum HOM05D004705 ORTHO05D005595 2.4e-172 610.1 826 47.3
BcaB06g29595 Brassica carinata HOM05D004705 ORTHO05D005595 7.0e-172 608.6 829 46.4
C01p48810 Brassica napus HOM05D004705 ORTHO05D005595 2.3e-170 603.6 823 47.0
BraA01t03898Z Brassica rapa HOM05D004705 ORTHO05D005595 2.3e-170 603.6 822 46.6
Psat5g299960 Pisum sativum HOM05D004705 ORTHO05D005595 3.0e-170 603.2 617 54.3
C05p51460 Brassica napus HOM05D004705 ORTHO05D005595 8.6e-170 601.7 829 46.0
BcaC05g28954 Brassica carinata HOM05D004705 ORTHO05D005595 4.3e-169 599.4 830 45.8
A01p38480 Brassica napus HOM05D004705 ORTHO05D005595 7.3e-169 598.6 822 46.5
Nitab4.5_0000410g0340 Nicotiana tabacum HOM05D004705 ORTHO05D005595 1.1e-167 594.7 434 71.0
BcaC09g48528 Brassica carinata HOM05D004705 ORTHO05D005595 3.1e-167 593.2 823 46.2
arahy.Tifrunner.gnm1.ann1.1G4SNU Arachis hypogaea HOM05D004705 ORTHO05D005595 5.2e-167 592.4 829 44.3
Sabra01G0137000 Salix brachista HOM05D004705 ORTHO05D005595 2.0e-166 590.5 783 47.3
BraA05t22205Z Brassica rapa HOM05D004705 ORTHO05D005595 5.8e-166 589.0 823 46.9
BolC1t04836H Brassica oleracea HOM05D004705 ORTHO05D005595 9.9e-166 588.2 824 46.4
arahy.Tifrunner.gnm1.ann1.WXP04W Arachis hypogaea HOM05D004705 ORTHO05D005595 2.9e-165 586.6 830 44.0
BcaB04g20914 Brassica carinata HOM05D004705 ORTHO05D005595 5.4e-164 582.4 823 44.5
COL.COLO4_12857 Corchorus olitorius HOM05D004705 ORTHO05D005595 5.1e-162 575.9 792 46.3
BolC5t33833H Brassica oleracea HOM05D004705 ORTHO05D005595 1.5e-161 574.3 829 45.7
Cpa.g.c32383.1 Carica papaya HOM05D004705 ORTHO05D005595 1.1e-159 568.2 740 48.6
arahy.Tifrunner.gnm1.ann1.AD4PBH Arachis hypogaea HOM05D004705 ORTHO05D005595 9.9e-158 561.6 794 48.6
Lalb_Chr25g0279551 Lupinus albus HOM05D004705 ORTHO05D005595 4.6e-155 552.7 785 44.2
Nn2g11880 Nelumbo nucifera HOM05D004705 ORTHO05D005595 7.1e-148 528.9 649 48.2
ATR0083G057 Amborella trichopoda HOM05D004705 ORTHO05D005595 9.6e-145 518.5 872 41.9
unitig_61.g26415 Utricularia gibba HOM05D004705 ORTHO05D005595 2.6e-142 510.4 530 55.3
Zm00001eb122560 Zea mays HOM05D004705 ORTHO05D005595 1.0e-138 498.4 869 41.4
Os01g0176500 Oryza sativa ssp. japonica HOM05D004705 ORTHO05D005595 5.1e-138 496.1 871 40.9
CDE01G0719 Ceratophyllum demersum HOM05D004705 ORTHO05D005595 9.9e-134 481.9 735 42.2
THA.LOC104812485 Tarenaya hassleriana HOM05D004705 ORTHO05D005595 8.4e-125 452.2 441 53.5
Ah.01g021140 Amaranthus hybridus HOM05D004705 ORTHO05D005595 7.9e-123 445.7 825 39.3
SEGI_27484 Sequoiadendron giganteum HOM05D004705 ORTHO05D005595 3.3e-105 387.1 648 39.4
SEGI_13982 Sequoiadendron giganteum HOM05D004705 ORTHO05D005595 3.8e-93 347.1 617 37.0
Actinidia16007 Actinidia chinensis HOM05D004705 ORTHO05D005595 3.3e-89 334.0 299 58.9
AagrBONN_evm.TU.Sc2ySwM_228.3613 Anthoceros agrestis HOM05D004705 ORTHO05D005595 2.8e-88 330.9 473 41.6
Pp3c13_19170 Physcomitrium patens HOM05D004705 ORTHO05D005595 2.0e-81 308.1 489 39.5
Pp3c23_2990 Physcomitrium patens HOM05D004705 ORTHO05D005595 2.0e-81 308.1 482 39.4
Pp3c8_15560 Physcomitrium patens HOM05D004705 ORTHO05D005595 8.3e-80 302.8 482 39.6
MBI01_g15493_MAGBIO Magnolia biondii HOM05D004705 ORTHO05D005595 1.4e-79 302.0 758 32.7
Pp3c20_1400 Physcomitrium patens HOM05D004705 ORTHO05D005595 3.6e-75 287.3 484 35.5
Pp3c20_1403 Physcomitrium patens HOM05D004705 ORTHO05D005595 3.6e-75 287.3 484 35.5
Pp3c8_22450 Physcomitrium patens HOM05D004705 ORTHO05D005595 1.8e-74 285.0 483 36.4
Pp3c24_17130 Physcomitrium patens HOM05D004705 ORTHO05D005595 2.3e-69 268.1 707 32.7
Pp3c23_18290 Physcomitrium patens HOM05D004705 ORTHO05D005595 3.3e-68 264.2 762 29.7
CDE02G1329 Ceratophyllum demersum HOM05D004705 ORTHO05D005595 3.6e-67 260.8 512 35.9
Lj8C335T16 Lonicera japonica HOM05D004705 ORTHO05D005595 5.6e-60 236.9 388 46.4
MBI04_g47892_MAGBIO Magnolia biondii HOM05D004705 ORTHO05D005595 1.9e-55 221.9 561 37.1
SMO147G0411 Selaginella moellendorffii HOM05D004705 ORTHO05D005595 3.2e-55 221.1 196 52.0
Actinidia16006 Actinidia chinensis HOM05D004705 ORTHO05D005595 3.7e-48 197.6 440 38.4
SHI09686 Sapria himalayana HOM05D004705 ORTHO05D005595 4.1e-47 194.1 697 30.6
Nitab4.5_0000410g0350 Nicotiana tabacum HOM05D004705 ORTHO05D005595 1.1e-36 159.5 393 35.4
Actinidia08822 Actinidia chinensis HOM05D004705 ORTHO05D005595 3.3e-36 157.9 173 56.6
BcaC09g48527 Brassica carinata HOM05D004705 ORTHO05D005595 6.9e-26 123.6 85 60.0
unitig_26.g8886 Utricularia gibba HOM05D004705 ORTHO05D005595 1.6e-19 102.4 83 62.7
Medtr1g107505 Medicago truncatula HOM05D004705 ORTHO05D005595 5.3e-18 97.4 71 64.8
MBI04_g47893_MAGBIO Magnolia biondii HOM05D004705 ORTHO05D005595 7.6e-17 93.6 205 31.7
GSVIVG01017207001 Vitis vinifera HOM05D029100 ORTHO05D016439 3.8e-16 91.3 77 55.8
unitig_61.g26414 Utricularia gibba HOM05D000584 ORTHO05D000458 3.9e-13 81.3 124 46.0
FAN21G1601 Fragaria x ananassa HOM05D000031 ORTHO05D000030 2.4e-10 72.0 53 56.6
FAN08G3635 Fragaria x ananassa HOM05D004705 ORTHO05D000113 2.0e-09 68.9 53 54.7
FAN15G3749 Fragaria x ananassa HOM05D005026 ORTHO05D005981 2.0e-09 68.9 53 54.7
Cpa.g.c42332 Carica papaya HOM05D004705 ORTHO05D005595 3.4e-09 68.2 53 54.7
FAN07G2703 Fragaria x ananassa HOM05D004705 ORTHO05D005595 1.1e-07 63.2 53 50.9
Medtr1g041460 Medicago truncatula HOM05D004705 ORTHO05D005595 1.1e-07 63.2 49 61.2


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