Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.20711 Avicennia marina HOM05D006089 ORTHO05D007345 1.0e-75 286.6 139 100.0
SGA_v2.0_scaffold52G19204 Striga asiatica HOM05D006089 ORTHO05D007345 1.4e-56 223.0 125 84.0
PGSC0003DMG400026032 Solanum tuberosum HOM05D006089 ORTHO05D007345 3.1e-56 221.9 124 85.5
Dinv44096 Davidia involucrata HOM05D006089 ORTHO05D007345 2.0e-55 219.2 123 82.1
Nitab4.5_0003110g0040 Nicotiana tabacum HOM05D006089 ORTHO05D007345 1.5e-53 213.0 125 81.6
vmacro13470 Vaccinium macrocarpon HOM05D006089 ORTHO05D007345 4.3e-53 211.5 129 76.0
Peaxi162Scf00377g00829 Petunia axillaris HOM05D006089 ORTHO05D007345 5.6e-53 211.1 129 80.6
Sopen01g036390 Solanum pennellii HOM05D006089 ORTHO05D007345 7.2e-53 210.7 129 80.6
CAN.G899.28 Capsicum annuum HOM05D006089 ORTHO05D007345 9.5e-53 210.3 124 83.1
Nitab4.5_0004415g0050 Nicotiana tabacum HOM05D006089 ORTHO05D007345 2.1e-52 209.1 126 79.4
Oeu002553.1 Olea europaea HOM05D006089 ORTHO05D007345 2.3e-51 205.7 127 75.6
Actinidia22779 Actinidia chinensis HOM05D006089 ORTHO05D007345 3.0e-51 205.3 123 79.7
Actinidia22834 Actinidia chinensis HOM05D006089 ORTHO05D007345 3.0e-51 205.3 123 79.7
DCAR_031889 Daucus carota HOM05D006089 ORTHO05D007345 1.5e-50 203.0 123 76.4
Cc02_g24750 Coffea canephora HOM05D006089 ORTHO05D007345 8.3e-49 197.2 124 79.8
Lsat_1_v5_gn_3_130781 Lactuca sativa HOM05D006089 ORTHO05D007345 1.4e-48 196.4 123 74.0
Lj7C540G12 Lonicera japonica HOM05D006089 ORTHO05D007345 2.4e-48 195.7 127 77.2
Hma1.2p1_0681F.1_g202480 Hydrangea macrophylla HOM05D006089 ORTHO05D007345 4.1e-48 194.9 128 70.3
Ciclev10027500m.g Citrus clementina HOM05D006089 ORTHO05D007345 2.0e-47 192.6 123 71.5
HanXRQChr13g0422761 Helianthus annuus HOM05D006089 ORTHO05D007345 2.0e-47 192.6 123 74.0
SalBow5G0249 Salvia bowleyana HOM05D006089 ORTHO05D007345 2.0e-47 192.6 123 74.8
Thecc.01G387500 Theobroma cacao HOM05D006089 ORTHO05D007345 4.6e-47 191.4 123 71.5
Potri.014G056800 Populus trichocarpa HOM05D006089 ORTHO05D007345 7.8e-47 190.7 123 70.7
TAR352G0004 Trochodendron aralioides HOM05D006089 ORTHO05D007345 5.0e-46 188.0 121 72.7
TAR375G0204 Trochodendron aralioides HOM05D006089 ORTHO05D007345 5.0e-46 188.0 121 72.7
unitig_26.g8876 Utricularia gibba HOM05D006089 ORTHO05D007345 5.0e-46 188.0 123 69.1
QL04p034802 Quercus lobata HOM05D006089 ORTHO05D007345 6.6e-46 187.6 123 69.9
Cpa.g.sc22.7 Carica papaya HOM05D006089 ORTHO05D007345 8.6e-46 187.2 124 72.6
Duzib138G0106 Durio zibethinus HOM05D006089 ORTHO05D007345 1.9e-45 186.0 123 69.1
Nn1g00934 Nelumbo nucifera HOM05D006089 ORTHO05D007345 1.9e-45 186.0 123 69.9
PSO478G2689 Papaver somniferum HOM05D006089 ORTHO05D007345 3.3e-45 185.3 123 69.9
RcHm_v2.0_Chr1g0348201 Rosa chinensis HOM05D006089 ORTHO05D007345 4.3e-45 184.9 123 69.9
ECA240G4128 Erigeron canadensis HOM05D006089 ORTHO05D007345 5.6e-45 184.5 123 71.5
Prupe.2G133900 Prunus persica HOM05D006089 ORTHO05D007345 5.6e-45 184.5 123 69.9
Manes.05G051700 Manihot esculenta HOM05D006089 ORTHO05D007345 9.5e-45 183.7 123 69.9
Sabra14G0041400 Salix brachista HOM05D006089 ORTHO05D007345 4.7e-44 181.4 123 68.3
TWI14G0524 Tripterygium wilfordii HOM05D006089 ORTHO05D007345 8.0e-44 180.6 125 68.8
Cfa011118 Carpinus fangiana HOM05D006089 ORTHO05D007345 1.0e-43 180.3 124 68.5
Ca_02316_v3 Cicer arietinum L. HOM05D006089 ORTHO05D007345 1.0e-43 180.3 123 69.1
Gorai.008G107600 Gossypium raimondii HOM05D006089 ORTHO05D007345 1.0e-43 180.3 124 69.4
PSO782G3316 Papaver somniferum HOM05D006089 ORTHO05D007345 1.0e-43 180.3 123 68.3
TPR.G39066 Trifolium pratense HOM05D006089 ORTHO05D007345 1.0e-43 180.3 123 69.9
Phvul.008G152801 Phaseolus vulgaris HOM05D006089 ORTHO05D007345 1.8e-43 179.5 123 69.9
Aqoxy5G04142 Aquilegia oxysepala HOM05D006089 ORTHO05D007345 2.3e-43 179.1 128 65.6
Gohir.D12G098900 Gossypium hirsutum HOM05D006089 ORTHO05D007345 4.0e-43 178.3 124 68.5
Aqoxy1G01632 Aquilegia oxysepala HOM05D006089 ORTHO05D007345 5.2e-43 177.9 128 64.8
Glyma.11G161947 Glycine max HOM05D006089 ORTHO05D007345 5.2e-43 177.9 123 69.9
Medtr7g045370 Medicago truncatula HOM05D006089 ORTHO05D007345 5.2e-43 177.9 123 69.9
Atru.chr3.878 Acer truncatum HOM05D006089 ORTHO05D007345 6.8e-43 177.6 123 70.7
MD07G1110600 Malus domestica HOM05D006089 ORTHO05D007345 6.8e-43 177.6 123 69.1
VMungo1383G3667 Vigna mungo HOM05D006089 ORTHO05D007345 6.8e-43 177.6 123 69.1
CSS0033793 Camellia sinensis var. sinensis HOM05D006089 ORTHO05D007345 8.9e-43 177.2 128 73.4
CSS0041110 Camellia sinensis var. sinensis HOM05D006089 ORTHO05D007345 8.9e-43 177.2 128 73.4
arahy.Tifrunner.gnm1.ann1.CQPK1H Arachis hypogaea HOM05D006089 ORTHO05D007345 1.2e-42 176.8 123 67.5
FvH4_7g10450 Fragaria vesca HOM05D006089 ORTHO05D007345 1.5e-42 176.4 123 68.3
FAN01G0243 Fragaria x ananassa HOM05D006089 ORTHO05D007345 1.5e-42 176.4 123 68.3
FAN03G1053 Fragaria x ananassa HOM05D006089 ORTHO05D007345 1.5e-42 176.4 123 68.3
FAN06G0349 Fragaria x ananassa HOM05D006089 ORTHO05D007345 1.5e-42 176.4 123 68.3
Lalb_Chr03g0040081 Lupinus albus HOM05D006089 ORTHO05D007345 1.5e-42 176.4 123 68.3
arahy.Tifrunner.gnm1.ann1.6Q8RNL Arachis hypogaea HOM05D006089 ORTHO05D007345 2.0e-42 176.0 123 67.5
CiPaw.13G030000 Carya illinoinensis HOM05D006089 ORTHO05D007345 2.0e-42 176.0 123 65.9
FAN06G2506 Fragaria x ananassa HOM05D006089 ORTHO05D007345 2.0e-42 176.0 123 67.5
Atru.chr3.880 Acer truncatum HOM05D006089 ORTHO05D007345 3.4e-42 175.3 123 69.9
Sp4g27060 Schrenkiella parvula HOM05D006089 ORTHO05D007345 3.4e-42 175.3 123 65.0
THA.LOC104817203 Tarenaya hassleriana HOM05D006089 ORTHO05D007345 3.4e-42 175.3 124 67.7
Atru.chr3.879 Acer truncatum HOM05D006089 ORTHO05D007345 5.8e-42 174.5 123 69.1
Carub.0004s2759 Capsella rubella HOM05D006089 ORTHO05D007345 9.8e-42 173.7 123 64.2
AT2G44990 Arabidopsis thaliana HOM05D006089 ORTHO05D007345 1.3e-41 173.3 123 64.2
BcaC02g07127 Brassica carinata HOM05D006089 ORTHO05D007345 1.3e-41 173.3 123 64.2
C04p71360 Brassica napus HOM05D006089 ORTHO05D007345 1.3e-41 173.3 123 64.2
BolC4t28641H Brassica oleracea HOM05D006089 ORTHO05D007345 1.3e-41 173.3 123 64.2
BraA04t18821Z Brassica rapa HOM05D006089 ORTHO05D007345 1.3e-41 173.3 123 64.2
Thhalv10001733m.g Eutrema salsugineum HOM05D006089 ORTHO05D007345 1.3e-41 173.3 123 64.2
Gohir.A12G096200 Gossypium hirsutum HOM05D006089 ORTHO05D007345 1.3e-41 173.3 124 66.9
CARHR140250 Cardamine hirsuta HOM05D006089 ORTHO05D007345 1.7e-41 172.9 123 65.0
Aa31LG1G26580 Aethionema arabicum HOM05D006089 ORTHO05D007345 2.2e-41 172.6 123 64.2
Glyma.01G073200 Glycine max HOM05D006089 ORTHO05D007345 2.2e-41 172.6 123 67.5
Lsat_1_v5_gn_3_130581 Lactuca sativa HOM05D006089 ORTHO05D007345 2.2e-41 172.6 123 65.0
RcHm_v2.0_Chr1g0348171 Rosa chinensis HOM05D006089 ORTHO05D007345 3.7e-41 171.8 123 64.2
Lj1g0018675 Lotus japonicus HOM05D006089 ORTHO05D007345 4.9e-41 171.4 123 65.9
Psat3g158440 Pisum sativum HOM05D006089 ORTHO05D007345 4.9e-41 171.4 123 67.5
AL4G44090 Arabidopsis lyrata HOM05D006089 ORTHO05D007345 1.1e-40 170.2 123 62.6
PGR042G2976 Punica granatum HOM05D006089 ORTHO05D007345 1.1e-40 170.2 124 63.7
RcHm_v2.0_Chr1g0342921 Rosa chinensis HOM05D006089 ORTHO05D007345 1.9e-40 169.5 123 63.4
A04p33590 Brassica napus HOM05D006089 ORTHO05D007345 2.4e-40 169.1 123 63.4
RcHm_v2.0_Chr1g0348141 Rosa chinensis HOM05D006089 ORTHO05D007345 2.4e-40 169.1 123 63.4
Lsat_1_v5_gn_3_129760 Lactuca sativa HOM05D006089 ORTHO05D007345 3.5e-39 165.2 123 63.4
Haze_02744 Corylus avellana HOM05D006089 ORTHO05D007345 6.0e-39 164.5 106 70.8
HPP92_022466 Vanilla planifolia HOM05D006089 ORTHO05D007345 5.0e-38 161.4 123 62.6
EL10Ac1g00808 Beta vulgaris HOM05D006089 ORTHO05D007345 8.6e-38 160.6 125 64.0
Eucgr.E01594 Eucalyptus grandis HOM05D006089 ORTHO05D007345 7.3e-37 157.5 125 60.8
AUR62013699 Chenopodium quinoa HOM05D006089 ORTHO05D007345 1.6e-36 156.4 124 62.1
Zm00001eb074640 Zea mays HOM05D006089 ORTHO05D007345 1.6e-36 156.4 123 57.7
GSVIVG01018217001 Vitis vinifera HOM05D006089 ORTHO05D007345 3.6e-36 155.2 102 67.6
ATR0057G126 Amborella trichopoda HOM05D006089 ORTHO05D007345 8.1e-36 154.1 123 61.0
AUR62004137 Chenopodium quinoa HOM05D006089 ORTHO05D007345 8.1e-36 154.1 124 61.3
Sc26g0001370 Simmondsia chinensis HOM05D006089 ORTHO05D007345 1.1e-35 153.7 121 58.7
Sed0027986 Sechium edule HOM05D006089 ORTHO05D007345 1.4e-35 153.3 128 58.6
Migut.B01565 Erythranthe guttata HOM05D006089 ORTHO05D007345 1.8e-35 152.9 87 86.2
HPP92_014493 Vanilla planifolia HOM05D006089 ORTHO05D007345 2.3e-35 152.5 123 60.2
CDE11G1089 Ceratophyllum demersum HOM05D006089 ORTHO05D007345 6.8e-35 151.0 121 58.7
CsaV3_6G008730 Cucumis sativus L. HOM05D006089 ORTHO05D007345 5.8e-34 147.9 124 58.1
Os04g0550600 Oryza sativa ssp. japonica HOM05D006089 ORTHO05D007345 1.9e-32 142.9 123 53.7
MELO3C022291.2 Cucumis melo HOM05D006089 ORTHO05D007345 7.1e-32 141.0 124 57.3
RcHm_v2.0_Chr1g0342931 Rosa chinensis HOM05D006089 ORTHO05D007345 1.1e-29 133.7 92 67.4
COL.COLO4_12447 Corchorus olitorius HOM05D006089 ORTHO05D007345 1.5e-29 133.3 123 56.1
SEGI_10037 Sequoiadendron giganteum HOM05D006089 ORTHO05D007345 7.3e-29 131.0 132 50.0
AagrBONN_evm.TU.Sc2ySwM_117.1981 Anthoceros agrestis HOM05D006089 ORTHO05D007345 2.0e-26 122.9 128 44.5
Mapoly0075s0089 Marchantia polymorpha HOM05D006089 ORTHO05D007345 1.4e-24 116.7 110 48.2
Pp3c6_21550 Physcomitrium patens HOM05D006089 ORTHO05D007345 6.0e-23 111.3 110 45.5
SMO165G0127 Selaginella moellendorffii HOM05D006089 ORTHO05D007345 5.8e-18 94.7 117 41.9
ClCG06G002420 Citrullus lanatus HOM05D006089 ORTHO05D007345 9.6e-13 77.4 64 62.5
Rhsim07G0033200 Rhododendron simsii HOM05D006089 ORTHO05D007345 2.8e-12 75.9 103 44.7


User provided reference genes

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